Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36204 Trifolium pratense HOM05D002916 ORTHO05D003152 3.4e-92 341.7 173 100.0
Ca_16766_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 4.5e-52 208.4 148 75.7
Psat5g073040 Pisum sativum HOM05D002916 ORTHO05D003152 1.7e-51 206.5 149 76.5
Medtr3g092470 Medicago truncatula HOM05D002916 ORTHO05D003152 9.0e-45 184.1 140 75.0
Glyma.04G229700 Glycine max HOM05D002916 ORTHO05D003152 6.3e-38 161.4 154 57.8
VMungo1309G2175 Vigna mungo HOM05D002916 ORTHO05D003152 3.1e-37 159.1 157 54.8
Glyma.06G135000 Glycine max HOM05D002916 ORTHO05D003152 9.1e-37 157.5 154 57.1
Phvul.009G046400 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 3.4e-36 155.6 157 54.1
CiPaw.06G042000 Carya illinoinensis HOM05D002916 ORTHO05D003152 7.2e-26 121.3 165 43.6
Lalb_Chr08g0239761 Lupinus albus HOM05D002916 ORTHO05D003152 3.6e-25 119.0 152 48.7
Haze_00282 Corylus avellana HOM05D002916 ORTHO05D003152 7.5e-23 111.3 155 43.9
QL09p007312 Quercus lobata HOM05D002916 ORTHO05D003152 7.5e-23 111.3 166 41.0
Cfa016172 Carpinus fangiana HOM05D002916 ORTHO05D003152 1.3e-22 110.5 157 43.3
Manes.01G042300 Manihot esculenta HOM05D002916 ORTHO05D003152 1.8e-21 106.7 153 45.8
Lalb_Chr11g0067321 Lupinus albus HOM05D002916 ORTHO05D003152 1.6e-20 103.6 146 44.5
Thecc.03G207400 Theobroma cacao HOM05D002916 ORTHO05D003152 2.0e-20 103.2 165 41.2
Potri.015G005700 Populus trichocarpa HOM05D002916 ORTHO05D003152 3.5e-20 102.4 164 42.7
Hma1.2p1_0094F.1_g047290 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 4.5e-20 102.1 146 41.8
Potri.012G022300 Populus trichocarpa HOM05D002916 ORTHO05D003152 7.7e-20 101.3 164 41.5
TAR636G0145 Trochodendron aralioides HOM05D002916 ORTHO05D003152 7.7e-20 101.3 159 37.7
Sabra12G0011500 Salix brachista HOM05D002916 ORTHO05D003152 1.0e-19 100.9 160 40.6
Gorai.008G265400 Gossypium raimondii HOM05D002916 ORTHO05D003152 5.0e-19 98.6 129 45.0
Prupe.2G317800 Prunus persica HOM05D002916 ORTHO05D003152 5.0e-19 98.6 141 44.0
Gohir.D12G247400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.1e-18 97.4 129 44.2
Duzib084G1372 Durio zibethinus HOM05D002916 ORTHO05D003152 1.5e-18 97.1 168 37.5
TWI23G0095 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 2.5e-18 96.3 126 44.4
Atru.chr12.2401 Acer truncatum HOM05D002916 ORTHO05D003152 3.2e-18 95.9 136 42.6
DCAR_008976 Daucus carota HOM05D002916 ORTHO05D003152 3.2e-18 95.9 164 36.6
Gohir.A12G246700 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.2e-18 95.9 129 44.2
ClCG01G000110 Citrullus lanatus HOM05D002916 ORTHO05D003152 2.1e-17 93.2 167 35.3
MBI04_g15577_MAGBIO Magnolia biondii HOM05D002916 ORTHO05D003152 2.7e-17 92.8 159 37.7
COL.COLO4_14359 Corchorus olitorius HOM05D002916 ORTHO05D003152 3.6e-17 92.4 146 41.8
RcHm_v2.0_Chr1g0382771 Rosa chinensis HOM05D002916 ORTHO05D003152 6.1e-17 91.7 160 40.0
QL02p027552 Quercus lobata HOM05D002916 ORTHO05D003152 8.0e-17 91.3 162 35.8
Dinv29219 Davidia involucrata HOM05D002916 ORTHO05D003152 1.0e-16 90.9 144 41.7
DCAR_020363 Daucus carota HOM05D002916 ORTHO05D003152 8.8e-16 87.8 163 34.4
PGR042G3508 Punica granatum HOM05D002916 ORTHO05D003152 8.8e-16 87.8 125 42.4
Rhsim03G0214600 Rhododendron simsii HOM05D001023 ORTHO05D000912 8.8e-16 87.8 134 37.3
Nn3g18859 Nelumbo nucifera HOM05D002916 ORTHO05D003152 1.2e-15 87.4 167 35.9
CANSAT21G0001 Cannabis sativa HOM05D002916 ORTHO05D003152 9.8e-15 84.3 168 33.9
Eucgr.K00425 Eucalyptus grandis HOM05D002916 ORTHO05D003152 1.3e-14 84.0 169 34.3
FAN03G0202 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.3e-14 84.0 111 45.0
Actinidia34261 Actinidia chinensis HOM05D002916 ORTHO05D003152 3.7e-14 82.4 157 35.0
FAN10G3649 Fragaria x ananassa HOM05D002916 ORTHO05D003152 6.3e-14 81.6 111 44.1
FAN01G1170 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.1e-13 80.9 111 44.1
FAN10G0037 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.4e-13 80.5 111 43.2
Sed0016396 Sechium edule HOM05D002916 ORTHO05D003152 1.8e-13 80.1 155 31.0
ATR0078G023 Amborella trichopoda HOM05D002916 ORTHO05D003152 4.1e-13 79.0 116 37.1
Manes.12G116500 Manihot esculenta HOM05D002916 ORTHO05D003152 4.1e-13 79.0 138 40.6
MELO3C005922.2 Cucumis melo HOM05D002916 ORTHO05D003152 5.4e-13 78.6 169 30.2
PSO266G0041 Papaver somniferum HOM05D002916 ORTHO05D003152 5.4e-13 78.6 170 30.6
Sabra15G0004100 Salix brachista HOM05D002916 ORTHO05D003152 5.4e-13 78.6 154 39.0
CsaV3_5G000050 Cucumis sativus L. HOM05D002916 ORTHO05D003152 1.2e-12 77.4 169 30.2
AUR62035612 Chenopodium quinoa HOM05D002916 ORTHO05D003152 1.6e-12 77.0 132 37.1
PSO478G4364 Papaver somniferum HOM05D002916 ORTHO05D003152 1.6e-12 77.0 140 35.7
Duzib068G0006 Durio zibethinus HOM05D002916 ORTHO05D003152 2.7e-12 76.3 124 40.3
EL10Ac3g05193 Beta vulgaris HOM05D002916 ORTHO05D003152 4.5e-12 75.5 170 31.8
AUR62006014 Chenopodium quinoa HOM05D002916 ORTHO05D003152 2.9e-11 72.8 135 35.6
Gohir.D04G099400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.8e-11 72.4 145 35.2
Gorai.009G402300 Gossypium raimondii HOM05D002916 ORTHO05D003152 3.8e-11 72.4 145 35.2
Thecc.05G089800 Theobroma cacao HOM05D002916 ORTHO05D003152 3.8e-11 72.4 162 31.5
EL10Ac3g05191 Beta vulgaris HOM05D002916 ORTHO05D003152 5.0e-11 72.0 85 42.4
Haze_09193 Corylus avellana HOM05D002916 ORTHO05D003152 5.0e-11 72.0 107 36.4
DCAR_013392 Daucus carota HOM05D002916 ORTHO05D003152 8.5e-11 71.2 146 30.8
Ah.13g070720 Amaranthus hybridus HOM05D002916 ORTHO05D003152 1.1e-10 70.9 182 30.8
COL.COLO4_29727 Corchorus olitorius HOM05D002916 ORTHO05D003152 1.5e-10 70.5 153 31.4
Nn6g34891 Nelumbo nucifera HOM05D002916 ORTHO05D003152 1.5e-10 70.5 133 34.6
PSO478G4153 Papaver somniferum HOM05D002916 ORTHO05D003152 2.5e-10 69.7 105 36.2
Sabra05G0140200 Salix brachista HOM05D002916 ORTHO05D003152 2.5e-10 69.7 151 34.4
Migut.F00158 Erythranthe guttata HOM05D002916 ORTHO05D003152 3.2e-10 69.3 181 32.0
DCAR_013390 Daucus carota HOM05D002916 ORTHO05D003152 7.2e-10 68.2 146 30.8
EL10Ac3g05192 Beta vulgaris HOM05D002916 ORTHO05D003152 9.4e-10 67.8 134 32.8
Manes.08G025700 Manihot esculenta HOM05D002916 ORTHO05D003152 9.4e-10 67.8 149 30.9
Duzib093G0112 Durio zibethinus HOM05D002916 ORTHO05D003152 1.2e-09 67.4 149 29.5
Gohir.A04G062400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.6e-09 67.0 145 31.0
Manes.09G055000 Manihot esculenta HOM05D002916 ORTHO05D003152 1.6e-09 67.0 142 31.0
FvH4_6g18810 Fragaria vesca HOM05D002916 ORTHO05D003152 2.7e-09 66.2 189 28.0
Atru.chr8.1530 Acer truncatum HOM05D002916 ORTHO05D003152 3.6e-09 65.9 145 33.8
QL05p034193 Quercus lobata HOM05D002916 ORTHO05D003152 3.6e-09 65.9 150 30.7
Sc13g0010210 Simmondsia chinensis HOM05D002916 ORTHO05D003152 4.7e-09 65.5 107 36.4
FAN05G3486 Fragaria x ananassa HOM05D002916 ORTHO05D003152 6.1e-09 65.1 176 28.4
Dinv31688 Davidia involucrata HOM05D004140 ORTHO05D006116 8.0e-09 64.7 148 31.8
Prupe.7G109500 Prunus persica HOM05D002916 ORTHO05D003152 8.0e-09 64.7 146 29.5
RcHm_v2.0_Chr3g0473821 Rosa chinensis HOM05D002916 ORTHO05D003152 8.0e-09 64.7 201 27.4
Ciclev10012941m.g Citrus clementina HOM05D002916 ORTHO05D003152 1.0e-08 64.3 147 29.9
Gorai.002G239800 Gossypium raimondii HOM05D002916 ORTHO05D003152 1.0e-08 64.3 120 32.5
FAN14G1204 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.4e-08 63.9 148 31.1
Rhsim03G0074900 Rhododendron simsii HOM05D002916 ORTHO05D003152 1.4e-08 63.9 154 27.3
Atru.chr8.1528 Acer truncatum HOM05D002916 ORTHO05D003152 1.8e-08 63.5 146 32.9
Potri.016G079700 Populus trichocarpa HOM05D002916 ORTHO05D003152 1.8e-08 63.5 152 29.6
SEGI_19412 Sequoiadendron giganteum HOM05D002916 ORTHO05D003152 1.8e-08 63.5 140 29.3
FAN05G4254 Fragaria x ananassa HOM05D002916 ORTHO05D003152 2.3e-08 63.2 176 27.8
Gohir.D01G195600 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.3e-08 63.2 120 32.5
Cpa.g.sc5.15 Carica papaya HOM05D002916 ORTHO05D003152 3.0e-08 62.8 155 30.3
SalBow6G0378 Salvia bowleyana HOM05D002916 ORTHO05D003152 3.0e-08 62.8 128 33.6
Actinidia05426 Actinidia chinensis HOM05D002916 ORTHO05D003152 4.0e-08 62.4 195 30.8
FAN02G4366 Fragaria x ananassa HOM05D002916 ORTHO05D003152 4.0e-08 62.4 148 31.1
Oeu047865.1 Olea europaea HOM05D002916 ORTHO05D003152 4.0e-08 62.4 148 29.7
MELO3C024547.2 Cucumis melo HOM05D002916 ORTHO05D003152 5.2e-08 62.0 120 35.8
CsaV3_6G040690 Cucumis sativus L. HOM05D002916 ORTHO05D003152 6.8e-08 61.6 117 35.0
DCAR_013391 Daucus carota HOM05D002916 ORTHO05D003152 6.8e-08 61.6 110 30.9
Actinidia31270 Actinidia chinensis HOM05D002916 ORTHO05D003152 1.2e-07 60.8 139 30.2
Glyma.03G196300 Glycine max HOM05D002916 ORTHO05D003152 1.2e-07 60.8 143 30.1
Glyma.10G072400 Glycine max HOM05D002916 ORTHO05D003152 1.2e-07 60.8 151 29.1
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 1.2e-07 60.8 142 30.3
Gohir.A01G206200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.2e-07 60.8 120 30.8
Peaxi162Scf00404g00102 Petunia axillaris HOM05D002916 ORTHO05D003152 1.2e-07 60.8 106 32.1
DCAR_007755 Daucus carota HOM05D002916 ORTHO05D003152 1.5e-07 60.5 135 28.1
Ciclev10013433m.g Citrus clementina HOM05D002916 ORTHO05D003152 2.6e-07 59.7 154 31.8
Sp6g38840 Schrenkiella parvula HOM05D002916 ORTHO05D003152 3.4e-07 59.3 171 30.4
ClCG04G010060 Citrullus lanatus HOM05D002916 ORTHO05D003152 5.7e-07 58.5 164 28.7
Phvul.001G190500 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 5.7e-07 58.5 146 29.5
Sabra16G0085600 Salix brachista HOM05D002916 ORTHO05D003152 5.7e-07 58.5 148 29.1
Cc06_g05820 Coffea canephora HOM05D002916 ORTHO05D003152 7.5e-07 58.2 148 25.7
Potri.006G213100 Populus trichocarpa HOM05D002916 ORTHO05D003152 7.5e-07 58.2 113 31.0
MSTRG.26638 Avicennia marina HOM05D002916 ORTHO05D003152 9.8e-07 57.8 151 29.8
A10p32230 Brassica napus HOM05D002916 ORTHO05D003152 9.8e-07 57.8 171 29.8
BraA10t45266Z Brassica rapa HOM05D002916 ORTHO05D003152 9.8e-07 57.8 171 29.8
Ca_09009_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 9.8e-07 57.8 146 28.8
Migut.L01781 Erythranthe guttata HOM05D002916 ORTHO05D003152 1.3e-06 57.4 151 31.8
Gorai.006G155100 Gossypium raimondii HOM05D002916 ORTHO05D003152 1.3e-06 57.4 153 28.1
Nn2g14164 Nelumbo nucifera HOM05D002916 ORTHO05D003152 1.3e-06 57.4 146 28.1
Sabra16G0087700 Salix brachista HOM05D002916 ORTHO05D003152 1.3e-06 57.4 148 29.1
Gohir.A11G003500 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.7e-06 57.0 117 29.9
MD12G1036700 Malus domestica HOM05D002916 ORTHO05D003152 1.7e-06 57.0 151 31.8
Sed0018474 Sechium edule HOM05D002916 ORTHO05D003152 1.7e-06 57.0 123 32.5
PGSC0003DMG400008880 Solanum tuberosum HOM05D002916 ORTHO05D003152 1.7e-06 57.0 77 39.0
VMungo1383G0514 Vigna mungo HOM05D002916 ORTHO05D003152 1.7e-06 57.0 148 27.7
CDE12G0661 Ceratophyllum demersum HOM05D002916 ORTHO05D003152 2.2e-06 56.6 120 29.2
Gohir.D09G135200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.2e-06 56.6 129 28.7
TWI74G0225 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 2.2e-06 56.6 139 30.2
Duzib128G0442 Durio zibethinus HOM05D002916 ORTHO05D003152 2.8e-06 56.2 149 29.5
Gohir.A09G139400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.8e-06 56.2 105 30.5
Gohir.A07G134900 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.9e-06 55.5 117 29.9
EL10Ac4g08766 Beta vulgaris HOM05D002916 ORTHO05D003152 6.3e-06 55.1 84 35.7
Haze_16634 Corylus avellana HOM05D002916 ORTHO05D003152 6.3e-06 55.1 139 23.7
Haze_16636 Corylus avellana HOM05D002916 ORTHO05D003152 6.3e-06 55.1 139 23.7
Oeu056929.1 Olea europaea HOM05D002916 ORTHO05D003152 6.3e-06 55.1 147 28.6
DCAR_009166 Daucus carota HOM05D002916 ORTHO05D003152 8.3e-06 54.7 154 26.0
Hma1.2p1_0084F.1_g043850 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 8.3e-06 54.7 143 30.1
Hma1.2p1_0820F.1_g223855 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 8.3e-06 54.7 143 30.1
PGR004G1189 Punica granatum HOM05D002916 ORTHO05D003152 8.3e-06 54.7 146 29.5
TWI53G0172 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 8.3e-06 54.7 130 27.7


User provided reference genes

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