Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 1.9e-50 202.2 100 100.0
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.7e-32 142.5 101 73.3
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 1.8e-29 132.5 108 69.4
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 2.3e-24 115.5 117 59.8
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 2.1e-17 92.4 109 53.2
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 3.5e-17 91.7 100 52.0
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 3.5e-17 91.7 100 52.0
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 6.7e-16 87.4 108 49.1
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 8.7e-16 87.0 100 50.0
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 1.9e-15 85.9 107 48.6
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 5.6e-15 84.3 100 48.0
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 5.6e-15 84.3 100 48.0
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 9.6e-15 83.6 102 49.0
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 1.6e-14 82.8 102 48.0
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 2.1e-14 82.4 102 47.1
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 4.8e-14 81.3 102 47.1
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.1e-13 80.1 102 47.1
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 1.4e-13 79.7 108 46.3
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 1.4e-13 79.7 105 46.7
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.8e-13 79.3 108 48.1
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 1.8e-13 79.3 104 49.0
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 1.8e-13 79.3 108 46.3
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 2.4e-13 79.0 109 47.7
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 9.0e-13 77.0 102 47.1
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 2.6e-12 75.5 105 44.8
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 3.4e-12 75.1 105 44.8
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 3.4e-12 75.1 109 45.9
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 3.4e-12 75.1 113 43.4
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 4.5e-12 74.7 107 50.5
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 4.5e-12 74.7 109 44.0
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 5.8e-12 74.3 105 44.8
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 5.8e-12 74.3 109 45.9
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 5.8e-12 74.3 113 46.0
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 5.8e-12 74.3 113 46.0
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 7.6e-12 73.9 109 43.1
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 7.6e-12 73.9 108 41.7
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 7.6e-12 73.9 109 43.1
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 1.0e-11 73.6 104 46.2
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 1.0e-11 73.6 111 45.0
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.3e-11 73.2 104 42.3
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 1.3e-11 73.2 102 45.1
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 1.7e-11 72.8 110 45.5
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 2.2e-11 72.4 104 44.2
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 2.2e-11 72.4 109 51.4
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 2.2e-11 72.4 103 43.7
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 2.9e-11 72.0 104 45.2
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 2.9e-11 72.0 111 43.2
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 3.8e-11 71.6 104 45.2
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 3.8e-11 71.6 104 45.2
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 3.8e-11 71.6 106 45.3
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 3.8e-11 71.6 104 43.3
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 3.8e-11 71.6 108 42.6
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 4.9e-11 71.2 101 43.6
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 8.4e-11 70.5 111 41.4
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.1e-10 70.1 101 41.6
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 1.1e-10 70.1 104 42.3
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 1.1e-10 70.1 104 41.3
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 1.1e-10 70.1 109 44.0
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 1.1e-10 70.1 122 42.6
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 1.4e-10 69.7 105 42.9
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 1.9e-10 69.3 108 47.2
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 4.2e-10 68.2 107 40.2
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 5.5e-10 67.8 104 41.3
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 9.3e-10 67.0 110 43.6
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 9.3e-10 67.0 110 43.6
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 9.3e-10 67.0 113 42.5
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 1.6e-09 66.2 112 44.6
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 1.6e-09 66.2 110 40.9
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 1.6e-09 66.2 108 40.7
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 2.1e-09 65.9 111 38.7
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 2.1e-09 65.9 114 37.7
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 4.6e-09 64.7 104 40.4
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 4.6e-09 64.7 100 43.0
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 7.9e-09 63.9 105 41.9
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 1.3e-08 63.2 117 38.5
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 1.3e-08 63.2 114 43.0
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 1.3e-08 63.2 117 40.2
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 1.8e-08 62.8 111 41.4
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 1.8e-08 62.8 100 42.0
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 2.3e-08 62.4 115 41.7
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.0e-08 62.0 113 40.7
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 3.0e-08 62.0 113 40.7
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 1.5e-07 59.7 106 45.3
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 1.5e-07 59.7 105 41.9
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 2.5e-07 58.9 113 37.2
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 2.5e-07 58.9 48 58.3
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 4.3e-07 58.2 48 56.2
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 7.4e-07 57.4 105 36.2
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 7.4e-07 57.4 109 38.5
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 1.3e-06 56.6 118 36.4
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 1.6e-06 56.2 49 46.9
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 2.1e-06 55.8 33 66.7


User provided reference genes

Program Settings