Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36100 Trifolium pratense HOM05D014681 ORTHO05D006373 1.1e-158 563.1 270 100.0
TPR.G29272 Trifolium pratense HOM05D020749 ORTHO05D006373 4.2e-97 358.6 232 72.0
TPR.G14519 Trifolium pratense HOM05D014681 ORTHO05D006373 7.2e-73 278.1 266 49.6
TPR.G14054 Trifolium pratense HOM05D014681 ORTHO05D006373 2.3e-55 219.9 232 45.3
TPR.G20500 Trifolium pratense HOM05D014681 ORTHO05D006373 3.1e-31 139.8 144 47.9
TPR.G22357 Trifolium pratense HOM05D003261 ORTHO05D004230 7.3e-25 118.6 127 46.5
Hund11135 Selenicereus undatus HOM05D014069 ORTHO05D000105 1.2e-19 101.3 239 27.2
AUR62024387 Chenopodium quinoa HOM05D008347 ORTHO05D006373 6.0e-19 99.0 236 28.8
AUR62036520 Chenopodium quinoa HOM05D008347 ORTHO05D006373 6.0e-19 99.0 236 28.4
AUR62034037 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.3e-18 97.8 231 23.4
EL10Ac6g13718 Beta vulgaris HOM05D008347 ORTHO05D006373 1.7e-18 97.4 234 24.4
EL10Ac8g20298 Beta vulgaris HOM05D008347 ORTHO05D006373 1.7e-18 97.4 234 24.4
EL10Ac8g20301 Beta vulgaris HOM05D008347 ORTHO05D006373 1.7e-18 97.4 234 24.4
EL10Ac4g08035 Beta vulgaris HOM05D008347 ORTHO05D006373 3.9e-18 96.3 234 24.4
AUR62039428 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.9e-18 96.3 231 22.9
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 3.9e-18 96.3 225 24.0
AUR62013905 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.1e-17 94.7 228 28.9
AUR62024102 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.5e-17 93.6 240 25.4
AUR62022722 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.3e-17 93.2 236 28.0
AUR62040645 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.3e-17 93.2 223 23.3
AUR62035164 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.3e-17 92.8 240 25.4
EL10Ac3g06751 Beta vulgaris HOM05D008347 ORTHO05D006373 5.6e-17 92.4 233 27.5
VMungo1299G0001 Vigna mungo HOM05D008347 ORTHO05D006373 2.1e-16 90.5 218 24.8
EL10Ac9g22462 Beta vulgaris HOM05D008347 ORTHO05D006373 2.3e-15 87.0 223 27.8
AUR62030750 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.2e-15 85.9 195 24.1
VMungo1383G0244 Vigna mungo HOM05D008347 ORTHO05D006373 5.2e-15 85.9 197 26.4
EL10Ac1g01891 Beta vulgaris HOM05D008347 ORTHO05D006373 6.8e-15 85.5 225 26.7
THA.LOC104820475 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 6.8e-15 85.5 221 25.8
AUR62006881 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.2e-14 84.7 226 23.5
EL10Ac1g01624 Beta vulgaris HOM05D008347 ORTHO05D006373 3.4e-14 83.2 222 26.6
Ah.15g098220 Amaranthus hybridus HOM05D009952 ORTHO05D011763 3.7e-13 79.7 245 25.3
EL10Ac8g20300 Beta vulgaris HOM05D008347 ORTHO05D006373 8.4e-13 78.6 249 22.5
Sp6g09590 Schrenkiella parvula HOM05D009356 ORTHO05D010353 8.4e-13 78.6 162 30.9
EL10Ac1g01468 Beta vulgaris HOM05D008347 ORTHO05D006373 1.1e-12 78.2 190 26.3
EL10Ac5g11801 Beta vulgaris HOM05D008347 ORTHO05D006373 2.4e-12 77.0 190 26.3
Ca_06761_v3 Cicer arietinum L. HOM05D008347 ORTHO05D006373 3.2e-12 76.6 262 22.1
AUR62040955 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.6e-11 74.3 204 21.6
AUR62021930 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.6e-11 72.8 184 25.0
Ah.11g039660 Amaranthus hybridus HOM05D009952 ORTHO05D011763 7.8e-11 72.0 247 24.7
HanXRQChr04g0109951 Helianthus annuus HOM05D010611 ORTHO05D011573 1.0e-10 71.6 171 29.8
Ah.10g025060 Amaranthus hybridus HOM05D020495 ORTHO05D017251 1.7e-10 70.9 225 27.6
THA.LOC104819104 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 8.6e-10 68.6 210 24.8
AUR62044448 Chenopodium quinoa HOM05D005322 ORTHO05D011763 1.1e-09 68.2 256 25.8
HanXRQChr10g0289471 Helianthus annuus HOM05D010611 ORTHO05D011573 1.5e-09 67.8 202 27.2
THA.LOC104804846 Tarenaya hassleriana HOM05D062396 ORTHO05D006373 1.9e-09 67.4 157 31.2
EL10Ac4g09233 Beta vulgaris HOM05D012416 ORTHO05D006373 2.5e-09 67.0 179 28.5
HanXRQChr03g0091861 Helianthus annuus HOM05D010611 ORTHO05D011573 2.5e-09 67.0 203 27.6
HanXRQChr12g0358021 Helianthus annuus HOM05D010611 ORTHO05D011573 2.5e-09 67.0 203 27.6
AUR62034995 Chenopodium quinoa HOM05D000107 ORTHO05D011763 3.3e-09 66.6 187 27.8
AUR62044633 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.3e-09 66.6 209 24.9
Sp2g06700 Schrenkiella parvula HOM05D009356 ORTHO05D010353 3.3e-09 66.6 137 32.1
AUR62037050 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.6e-09 65.9 235 19.6
Hund21319 Selenicereus undatus HOM05D014069 ORTHO05D017114 1.2e-08 64.7 158 29.1
EL10Ac4g08425 Beta vulgaris HOM05D009474 ORTHO05D006373 2.1e-08 63.9 219 25.6
EL10Ac7g17386 Beta vulgaris HOM05D009474 ORTHO05D006373 2.8e-08 63.5 247 25.1
BcaB08g35697 Brassica carinata HOM05D009356 ORTHO05D010353 2.8e-08 63.5 168 23.8
C07p06990 Brassica napus HOM05D009356 ORTHO05D010353 2.8e-08 63.5 229 22.3
AUR62044346 Chenopodium quinoa HOM05D012416 ORTHO05D006373 2.8e-08 63.5 178 29.2
EL10Ac4g08475 Beta vulgaris HOM05D009474 ORTHO05D006373 4.7e-08 62.8 225 25.3
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.7e-08 62.8 129 25.6
AUR62025216 Chenopodium quinoa HOM05D012416 ORTHO05D006373 6.2e-08 62.4 179 29.6
AUR62028249 Chenopodium quinoa HOM05D012416 ORTHO05D000016 6.2e-08 62.4 179 29.6
AUR62034621 Chenopodium quinoa HOM05D012416 ORTHO05D006373 6.2e-08 62.4 179 29.6
AUR62042040 Chenopodium quinoa HOM05D012416 ORTHO05D000016 6.2e-08 62.4 179 29.6
AUR62044466 Chenopodium quinoa HOM05D012416 ORTHO05D006373 6.2e-08 62.4 179 29.6
VMungo0331G0159 Vigna mungo HOM05D008347 ORTHO05D006373 6.2e-08 62.4 154 24.0
C04p15140 Brassica napus HOM05D009356 ORTHO05D010353 1.1e-07 61.6 229 22.7
Ah.12g065270 Amaranthus hybridus HOM05D009952 ORTHO05D011763 1.4e-07 61.2 239 23.8
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.4e-07 61.2 186 29.6
Hund25675 Selenicereus undatus HOM05D014069 ORTHO05D017114 1.8e-07 60.8 151 27.8
HanXRQChr17g0568721 Helianthus annuus HOM05D013529 ORTHO05D011573 2.4e-07 60.5 186 25.3
EL10Ac8g20299 Beta vulgaris HOM05D008347 ORTHO05D006373 3.1e-07 60.1 161 23.0
C02p25050 Brassica napus HOM05D009356 ORTHO05D010353 4.0e-07 59.7 229 22.7
AUR62028334 Chenopodium quinoa HOM05D008347 ORTHO05D006373 6.8e-07 58.9 149 21.5
EL10Ac5g11532 Beta vulgaris HOM05D009474 ORTHO05D006373 1.5e-06 57.8 161 26.7
HanXRQChr12g0366211 Helianthus annuus HOM05D013529 ORTHO05D011573 2.6e-06 57.0 217 27.2
VMungo1127G2249 Vigna mungo HOM05D008347 ORTHO05D006373 4.4e-06 56.2 98 25.5
EL10Ac4g08488 Beta vulgaris HOM05D009474 ORTHO05D006373 7.6e-06 55.5 154 26.6
AUR62008764 Chenopodium quinoa HOM05D008347 ORTHO05D006373 7.6e-06 55.5 101 26.7
TPR.G20316 Trifolium pratense HOM05D014681 ORTHO05D006373 9.9e-06 55.1 79 34.2


User provided reference genes

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