Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36091 Trifolium pratense HOM05D001046 ORTHO05D005883 1.1e-87 326.6 169 100.0
Medtr0010s0220 Medicago truncatula HOM05D001046 ORTHO05D005883 6.3e-35 151.4 137 65.0
Psat0s251g0080 Pisum sativum HOM05D001046 ORTHO05D005883 6.3e-35 151.4 142 63.4
Glyma.01G093902 Glycine max HOM05D001046 ORTHO05D005883 4.9e-27 125.2 137 55.5
Glyma.02G128900 Glycine max HOM05D001046 ORTHO05D005883 1.9e-26 123.2 137 53.3
Lj2g0002950 Lotus japonicus HOM05D001046 ORTHO05D005883 9.2e-26 120.9 137 50.4
Lalb_Chr04g0255081 Lupinus albus HOM05D001046 ORTHO05D005883 2.7e-25 119.4 137 51.1
Phvul.003G034100 Phaseolus vulgaris HOM05D001046 ORTHO05D005883 4.7e-22 108.6 137 49.6
arahy.Tifrunner.gnm1.ann1.L5PVB5 Arachis hypogaea HOM05D001046 ORTHO05D005883 4.4e-20 102.1 137 43.1
arahy.Tifrunner.gnm1.ann1.X1G7WL Arachis hypogaea HOM05D001046 ORTHO05D005883 4.4e-20 102.1 137 43.1
FvH4_4g28521 Fragaria vesca HOM05D001046 ORTHO05D005883 5.8e-20 101.7 160 42.5
FAN12G0380 Fragaria x ananassa HOM05D001046 ORTHO05D005883 5.8e-20 101.7 160 42.5
VMungo1215G2127 Vigna mungo HOM05D001046 ORTHO05D005883 5.8e-20 101.7 143 44.8
RcHm_v2.0_Chr4g0436541 Rosa chinensis HOM05D001046 ORTHO05D005883 1.3e-19 100.5 137 45.3
FAN17G2519 Fragaria x ananassa HOM05D001046 ORTHO05D005883 2.9e-19 99.4 160 41.9
Potri.008G109300 Populus trichocarpa HOM05D001046 ORTHO05D005883 2.9e-19 99.4 136 46.3
Potri.T108626 Populus trichocarpa HOM05D001046 ORTHO05D005883 2.9e-19 99.4 136 46.3
FAN07G2005 Fragaria x ananassa HOM05D001046 ORTHO05D005883 6.4e-19 98.2 160 41.2
GSVIVG01012023001 Vitis vinifera HOM05D001046 ORTHO05D005883 6.4e-19 98.2 136 44.9
Dinv27415 Davidia involucrata HOM05D001046 ORTHO05D005883 8.3e-19 97.8 137 46.0
QL03p044469 Quercus lobata HOM05D001046 ORTHO05D005883 1.1e-18 97.4 136 45.6
Sabra08G0083000 Salix brachista HOM05D001046 ORTHO05D005883 1.1e-18 97.4 136 44.9
Duzib248G1558 Durio zibethinus HOM05D001046 ORTHO05D005883 3.2e-18 95.9 141 44.0
Cfa008799 Carpinus fangiana HOM05D001046 ORTHO05D005883 5.4e-18 95.1 136 44.9
Atru.chr11.1438 Acer truncatum HOM05D001046 ORTHO05D005883 1.6e-17 93.6 136 42.6
Atru.chr11.1468 Acer truncatum HOM05D001046 ORTHO05D005883 1.6e-17 93.6 136 42.6
Gohir.D12G160700 Gossypium hirsutum HOM05D001046 ORTHO05D005883 1.6e-17 93.6 136 42.6
Gorai.008G173700 Gossypium raimondii HOM05D001046 ORTHO05D005883 1.6e-17 93.6 136 42.6
COL.COLO4_27721 Corchorus olitorius HOM05D001046 ORTHO05D005883 2.7e-17 92.8 136 43.4
Lj3C1023G11 Lonicera japonica HOM05D001046 ORTHO05D005883 3.5e-17 92.4 129 44.2
Nitab4.5_0000259g0330 Nicotiana tabacum HOM05D001046 ORTHO05D005883 3.5e-17 92.4 130 40.8
CSS0000214 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D005883 4.6e-17 92.0 130 46.2
CiPaw.05G117600 Carya illinoinensis HOM05D001046 ORTHO05D005883 4.6e-17 92.0 127 44.9
Thecc.02G315500 Theobroma cacao HOM05D001046 ORTHO05D005883 1.3e-16 90.5 140 42.1
CANSAT64G1908 Cannabis sativa HOM05D001046 ORTHO05D005883 1.7e-16 90.1 146 41.1
Peaxi162Scf00188g00433 Petunia axillaris HOM05D001046 ORTHO05D005883 1.7e-16 90.1 129 41.1
Nitab4.5_0006347g0030 Nicotiana tabacum HOM05D001046 ORTHO05D005883 2.3e-16 89.7 130 40.0
Prupe.1G300500 Prunus persica HOM05D001046 ORTHO05D005883 2.3e-16 89.7 127 43.3
MD16G1051700 Malus domestica HOM05D001046 ORTHO05D005883 3.9e-16 89.0 137 41.6
Solyc05g010160.3 Solanum lycopersicum HOM05D001046 ORTHO05D005883 6.6e-16 88.2 129 40.3
Sopen05g005940 Solanum pennellii HOM05D001046 ORTHO05D005883 6.6e-16 88.2 129 40.3
Ciclev10030592m.g Citrus clementina HOM05D001046 ORTHO05D005883 1.1e-15 87.4 135 41.5
Gohir.A12G157800 Gossypium hirsutum HOM05D001046 ORTHO05D005883 1.5e-15 87.0 136 40.4
Hund25120 Selenicereus undatus HOM05D001046 ORTHO05D005883 1.5e-15 87.0 128 44.5
CAN.G184.47 Capsicum annuum HOM05D001046 ORTHO05D005883 1.9e-15 86.7 130 42.3
Manes.06G076400 Manihot esculenta HOM05D001046 ORTHO05D005883 1.9e-15 86.7 136 42.6
Aa31LG7G8840 Aethionema arabicum HOM05D001046 ORTHO05D005883 3.3e-15 85.9 130 41.5
Cc11_g11040 Coffea canephora HOM05D001046 ORTHO05D005883 3.3e-15 85.9 147 39.5
BolC7t42425H Brassica oleracea HOM05D001046 ORTHO05D005883 7.3e-15 84.7 65 63.1
BcaC06g35168 Brassica carinata HOM05D001046 ORTHO05D005883 9.5e-15 84.3 130 40.0
C07p19150 Brassica napus HOM05D001046 ORTHO05D005883 9.5e-15 84.3 130 40.0
Nn3g17629 Nelumbo nucifera HOM05D001046 ORTHO05D005883 9.5e-15 84.3 127 40.9
A07p12760 Brassica napus HOM05D001046 ORTHO05D005883 1.2e-14 84.0 65 61.5
Ah.03g138130 Amaranthus hybridus HOM05D001046 ORTHO05D005883 1.6e-14 83.6 130 41.5
AT1G26170 Arabidopsis thaliana HOM05D001046 ORTHO05D005883 1.6e-14 83.6 130 40.0
Rhsim08G0040600 Rhododendron simsii HOM05D001046 ORTHO05D005883 1.6e-14 83.6 136 39.0
Sp1g22490 Schrenkiella parvula HOM05D001046 ORTHO05D005883 1.6e-14 83.6 64 60.9
vmacro18368 Vaccinium macrocarpon HOM05D001046 ORTHO05D005883 1.6e-14 83.6 136 38.2
Actinidia30169 Actinidia chinensis HOM05D001046 ORTHO05D005883 2.1e-14 83.2 143 39.9
AL1G39580 Arabidopsis lyrata HOM05D001046 ORTHO05D005883 2.1e-14 83.2 130 39.2
BcaB03g14057 Brassica carinata HOM05D001046 ORTHO05D005883 2.1e-14 83.2 64 62.5
AUR62002966 Chenopodium quinoa HOM05D001046 ORTHO05D005883 2.1e-14 83.2 130 42.3
Thhalv10006742m.g Eutrema salsugineum HOM05D001046 ORTHO05D005883 2.1e-14 83.2 130 40.0
Oeu002624.1 Olea europaea HOM05D001046 ORTHO05D005883 2.1e-14 83.2 140 38.6
Sc14g0007590 Simmondsia chinensis HOM05D001046 ORTHO05D005883 2.8e-14 82.8 132 37.9
AUR62007774 Chenopodium quinoa HOM05D001046 ORTHO05D005883 3.6e-14 82.4 130 42.3
TAR629G1491 Trochodendron aralioides HOM05D001046 ORTHO05D005883 4.7e-14 82.0 129 40.3
TWI79G0779 Tripterygium wilfordii HOM05D001046 ORTHO05D005883 8.1e-14 81.3 136 38.2
FAN22G0985 Fragaria x ananassa HOM05D001046 ORTHO05D005883 1.1e-13 80.9 155 37.4
THA.LOC104808446 Tarenaya hassleriana HOM05D001046 ORTHO05D005883 1.1e-13 80.9 135 36.3
CARHR025740 Cardamine hirsuta HOM05D001046 ORTHO05D005883 2.3e-13 79.7 84 52.4
PSO017G2748 Papaver somniferum HOM05D001046 ORTHO05D005883 2.3e-13 79.7 142 33.8
Carub.0001s2479 Capsella rubella HOM05D001046 ORTHO05D005883 3.1e-13 79.3 59 66.1
Lsat_1_v5_gn_3_62681 Lactuca sativa HOM05D001046 ORTHO05D005883 5.2e-13 78.6 136 36.8
DCAR_023709 Daucus carota HOM05D001046 ORTHO05D005883 6.8e-13 78.2 129 38.0
PSO478G0796 Papaver somniferum HOM05D001046 ORTHO05D005883 6.8e-13 78.2 129 35.7
Aqoxy3G00421 Aquilegia oxysepala HOM05D001046 ORTHO05D005883 1.2e-12 77.4 136 39.0
Sed0023728 Sechium edule HOM05D001046 ORTHO05D005883 1.5e-12 77.0 160 33.8
Migut.L01124 Erythranthe guttata HOM05D001046 ORTHO05D005883 2.0e-12 76.6 140 35.7
MSTRG.7703 Avicennia marina HOM05D001046 ORTHO05D005883 2.6e-12 76.3 140 36.4
Eucgr.B03078 Eucalyptus grandis HOM05D001046 ORTHO05D005883 3.4e-12 75.9 136 37.5
HanXRQChr15g0475941 Helianthus annuus HOM05D001046 ORTHO05D005883 4.4e-12 75.5 129 38.8
SGA_v2.0_scaffold16G07861 Striga asiatica HOM05D001046 ORTHO05D005883 4.4e-12 75.5 140 38.6
unitig_699.g19897 Utricularia gibba HOM05D001046 ORTHO05D005883 5.8e-12 75.1 138 36.2
ECA246G0060 Erigeron canadensis HOM05D001046 ORTHO05D005883 7.5e-12 74.7 136 34.6
ClCG05G023270 Citrullus lanatus HOM05D001046 ORTHO05D005883 9.9e-12 74.3 82 51.2
MELO3C012192.2 Cucumis melo HOM05D001046 ORTHO05D005883 9.9e-12 74.3 160 34.4
MBI15_g18373_MAGBIO Magnolia biondii HOM05D001046 ORTHO05D005883 9.9e-12 74.3 83 48.2
Zm00001eb380420 Zea mays HOM05D001046 ORTHO05D005883 9.9e-12 74.3 142 35.2
CsaV3_5G033760 Cucumis sativus L. HOM05D001046 ORTHO05D005883 1.3e-11 73.9 160 34.4
PGR102G1932 Punica granatum HOM05D001046 ORTHO05D005883 1.3e-11 73.9 138 37.7
SalBow8G4857 Salvia bowleyana HOM05D001046 ORTHO05D005883 1.7e-11 73.6 127 39.4
TPR.G14991 Trifolium pratense HOM05D001046 ORTHO05D005883 2.2e-11 73.2 137 45.3
EL10Ac6g14562 Beta vulgaris HOM05D001046 ORTHO05D005883 2.9e-11 72.8 135 34.8
ATR0691G253 Amborella trichopoda HOM05D001046 ORTHO05D005883 4.6e-09 65.5 132 34.1
SEGI_13623 Sequoiadendron giganteum HOM05D001046 ORTHO05D005883 1.1e-07 60.8 64 46.9
SGA_v2.0_scaffold32G13147 Striga asiatica HOM05D001046 ORTHO05D005883 2.1e-06 56.6 121 35.5
Mapoly0176s0015 Marchantia polymorpha HOM05D001046 ORTHO05D005883 2.8e-06 56.2 53 49.1
MELO3C028917.2 Cucumis melo HOM05D001046 ORTHO05D005883 8.1e-06 54.7 45 57.8


User provided reference genes

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