Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 1.4e-199 699.5 388 100.0
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 5.7e-172 607.8 390 79.0
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 3.2e-167 592.0 391 77.0
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 1.3e-160 570.1 375 81.9
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 3.1e-133 479.2 398 65.1
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 3.5e-121 439.1 407 61.4
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 5.1e-120 435.3 405 64.0
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 7.3e-119 431.4 405 65.2
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 2.1e-118 429.9 405 63.5
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 2.4e-106 389.8 395 54.7
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 3.5e-105 386.0 429 52.7
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 4.3e-103 379.0 429 51.7
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 3.8e-99 365.9 417 51.8
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.1e-97 360.1 416 48.1
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 3.5e-97 359.4 418 48.3
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 6.0e-97 358.6 419 47.7
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 7.8e-97 358.2 419 47.7
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 1.7e-96 357.1 422 49.3
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 3.9e-96 355.9 413 48.4
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.1e-95 354.4 418 48.3
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 2.5e-95 353.2 418 46.4
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 9.6e-95 351.3 416 50.7
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 9.6e-95 351.3 415 47.2
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 1.3e-94 350.9 423 45.9
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.3e-94 350.9 419 50.8
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 1.6e-94 350.5 422 47.6
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 1.8e-93 347.1 410 48.3
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 1.8e-93 347.1 412 47.3
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 5.3e-93 345.5 412 49.8
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 9.0e-93 344.7 413 47.0
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 9.0e-93 344.7 413 47.0
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.4e-92 342.8 420 46.4
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 7.6e-92 341.7 414 46.1
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 7.6e-92 341.7 414 44.9
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 9.9e-92 341.3 414 46.9
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 1.3e-91 340.9 428 46.5
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.9e-91 339.0 420 45.7
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 1.1e-90 337.8 414 45.4
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 1.4e-90 337.4 412 47.3
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 1.4e-90 337.4 426 46.0
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 1.9e-90 337.0 413 45.5
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 2.4e-90 336.7 422 46.0
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 4.2e-90 335.9 416 45.0
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 5.4e-90 335.5 417 45.3
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 7.1e-90 335.1 426 45.8
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 9.3e-90 334.7 413 46.2
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 9.3e-90 334.7 420 45.5
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 1.6e-89 334.0 412 44.7
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 4.6e-89 332.4 411 45.5
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 6.0e-89 332.0 420 45.5
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 1.0e-88 331.3 427 44.3
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 1.0e-88 331.3 413 44.8
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.3e-88 330.1 420 45.0
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 3.0e-88 329.7 415 46.5
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 5.1e-88 328.9 409 45.2
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 5.1e-88 328.9 406 46.1
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 6.7e-88 328.6 415 44.8
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 6.7e-88 328.6 414 44.4
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 1.1e-87 327.8 413 44.8
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.5e-87 327.4 416 45.4
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 1.5e-87 327.4 417 45.1
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 1.5e-87 327.4 413 45.0
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 1.5e-87 327.4 416 45.7
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 2.5e-87 326.6 413 44.8
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 2.5e-87 326.6 417 45.1
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 4.3e-87 325.9 414 44.2
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 5.6e-87 325.5 416 45.7
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 7.4e-87 325.1 421 45.4
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 1.3e-86 324.3 419 44.9
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 2.1e-86 323.6 424 43.6
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 3.7e-86 322.8 416 45.4
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 1.1e-85 321.2 409 45.2
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 2.4e-85 320.1 403 43.9
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.4e-85 320.1 414 46.4
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 6.9e-85 318.5 407 44.2
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 6.9e-85 318.5 414 44.4
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 6.9e-85 318.5 411 44.0
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 9.0e-85 318.2 414 44.9
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 9.0e-85 318.2 420 45.5
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.6e-84 316.6 410 45.6
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 7.6e-84 315.1 409 43.5
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.6e-81 307.4 402 43.0
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.6e-81 307.4 413 42.4
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 2.1e-81 307.0 410 43.2
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 4.6e-81 305.8 414 44.4
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 1.0e-80 304.7 416 44.2
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 1.3e-75 287.7 396 42.4
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.1e-74 284.6 418 43.1
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 3.0e-72 276.6 421 39.2
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.5e-71 274.2 408 42.2
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 1.3e-62 244.6 409 39.1
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 8.5e-59 231.9 400 35.2
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 1.0e-56 224.9 386 38.3
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 3.9e-56 223.0 301 42.9
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 2.4e-53 213.8 207 53.6
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 8.0e-49 198.7 388 34.5
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 8.8e-48 195.3 206 51.0
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 4.1e-45 186.4 259 44.4
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 1.6e-44 184.5 246 45.9
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 4.5e-44 183.0 366 36.3
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.1e-41 174.1 163 56.4
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 7.0e-29 132.5 424 27.1
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 1.1e-26 125.2 201 43.3
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 1.9e-18 97.8 456 25.0
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 6.4e-14 82.8 106 42.5
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 4.3e-10 70.1 88 51.1
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-09 67.8 143 35.0


User provided reference genes

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