Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36062 Trifolium pratense HOM05D003169 ORTHO05D410466 2.1e-32 141.7 71 100.0
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 1.4e-12 75.9 40 87.5
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 1.9e-12 75.5 40 85.0
TPR.G40025 Trifolium pratense HOM05D003169 ORTHO05D003700 5.4e-12 73.9 34 94.1
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 2.1e-11 72.0 40 82.5
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 2.7e-11 71.6 40 82.5
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 8.6e-10 66.6 40 75.0
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 1.1e-09 66.2 40 75.0
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 1.1e-09 66.2 40 75.0
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 1.5e-09 65.9 40 75.0
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 3.3e-09 64.7 40 70.0
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 5.6e-09 63.9 40 70.0
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 5.6e-09 63.9 40 70.0
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 7.3e-09 63.5 40 70.0
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 7.3e-09 63.5 40 70.0
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 1.2e-08 62.8 37 75.7
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 1.2e-08 62.8 37 75.7
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 1.6e-08 62.4 40 70.0
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 2.1e-08 62.0 40 70.0
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 2.1e-08 62.0 40 67.5
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 2.8e-08 61.6 37 67.6
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 3.6e-08 61.2 37 73.0
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 4.7e-08 60.8 37 73.0
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 1.8e-07 58.9 37 70.3
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 1.8e-07 58.9 37 67.6
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 2.4e-07 58.5 36 72.2
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 3.1e-07 58.2 37 67.6
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 3.1e-07 58.2 42 59.5
Cpa.g.sc32.147 Carica papaya HOM05D003169 ORTHO05D003700 4.0e-07 57.8 37 67.6
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 4.0e-07 57.8 37 64.9
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 4.0e-07 57.8 37 64.9
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 4.0e-07 57.8 37 64.9
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 5.2e-07 57.4 37 64.9
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 5.2e-07 57.4 37 67.6
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 5.2e-07 57.4 36 66.7
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 6.8e-07 57.0 37 64.9
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 6.8e-07 57.0 37 64.9
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 6.8e-07 57.0 42 57.1
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 6.8e-07 57.0 37 64.9
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 6.8e-07 57.0 36 66.7
Ah.16g106160 Amaranthus hybridus HOM05D003169 ORTHO05D003700 1.2e-06 56.2 52 46.2
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 1.2e-06 56.2 40 57.5
QL04p010784 Quercus lobata HOM05D003169 ORTHO05D003700 1.2e-06 56.2 37 64.9
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 1.2e-06 56.2 37 64.9
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 1.5e-06 55.8 40 57.5
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 2.0e-06 55.5 37 64.9
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 2.0e-06 55.5 37 62.2
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 2.0e-06 55.5 37 64.9
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 2.0e-06 55.5 37 64.9
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 2.6e-06 55.1 36 63.9
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 3.4e-06 54.7 53 50.9
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 4.4e-06 54.3 37 59.5
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 4.4e-06 54.3 53 52.8
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 7.6e-06 53.5 40 60.0
Os04g0609700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 7.6e-06 53.5 36 63.9
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 7.6e-06 53.5 37 59.5
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 9.9e-06 53.1 53 50.9
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 9.9e-06 53.1 37 62.2
Hund20128 Selenicereus undatus HOM05D003169 ORTHO05D003700 9.9e-06 53.1 53 47.2


User provided reference genes

Program Settings