Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 7.2e-19 96.3 50 100.0
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 1.3e-15 85.5 50 86.0
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 2.8e-15 84.3 50 86.0
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 1.5e-13 78.6 50 74.0
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 3.4e-13 77.4 50 76.0
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 4.5e-13 77.0 50 78.0
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 4.5e-13 77.0 50 78.0
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 4.5e-13 77.0 50 76.0
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 4.5e-13 77.0 50 74.0
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 5.9e-13 76.6 50 76.0
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 5.9e-13 76.6 50 72.0
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 5.9e-13 76.6 50 76.0
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 7.7e-13 76.3 50 76.0
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 7.7e-13 76.3 50 76.0
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 7.7e-13 76.3 50 74.0
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 7.7e-13 76.3 50 74.0
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 7.7e-13 76.3 50 72.0
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 1.0e-12 75.9 50 74.0
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 1.0e-12 75.9 50 76.0
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 1.3e-12 75.5 50 76.0
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 1.3e-12 75.5 50 74.0
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.3e-12 75.5 49 77.6
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 1.3e-12 75.5 49 77.6
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 1.7e-12 75.1 50 72.0
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 1.7e-12 75.1 50 72.0
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 1.7e-12 75.1 50 72.0
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 1.7e-12 75.1 50 72.0
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 2.2e-12 74.7 48 77.1
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 2.2e-12 74.7 50 74.0
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 2.2e-12 74.7 50 74.0
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 2.2e-12 74.7 50 74.0
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.2e-12 74.7 50 74.0
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 2.2e-12 74.7 50 74.0
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 2.2e-12 74.7 50 74.0
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 2.2e-12 74.7 50 74.0
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 2.2e-12 74.7 49 75.5
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 2.2e-12 74.7 50 74.0
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 2.9e-12 74.3 50 74.0
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 2.9e-12 74.3 50 76.0
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 2.9e-12 74.3 50 74.0
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 5.0e-12 73.6 47 78.7
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 5.0e-12 73.6 50 74.0
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 5.0e-12 73.6 46 80.4
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 5.0e-12 73.6 46 80.4
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 5.0e-12 73.6 46 80.4
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 5.0e-12 73.6 46 80.4
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 5.0e-12 73.6 46 80.4
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 6.5e-12 73.2 50 74.0
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 6.5e-12 73.2 50 70.0
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 6.5e-12 73.2 50 70.0
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 6.5e-12 73.2 50 68.0
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 6.5e-12 73.2 50 74.0
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 8.5e-12 72.8 46 78.3
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 8.5e-12 72.8 50 70.0
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 8.5e-12 72.8 50 70.0
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 8.5e-12 72.8 50 70.0
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 8.5e-12 72.8 50 70.0
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 8.5e-12 72.8 50 70.0
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 1.1e-11 72.4 50 70.0
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 1.1e-11 72.4 46 78.3
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 1.1e-11 72.4 46 78.3
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 1.4e-11 72.0 50 72.0
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 1.4e-11 72.0 50 72.0
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 1.4e-11 72.0 50 72.0
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 1.4e-11 72.0 50 66.0
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 1.4e-11 72.0 47 72.3
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 1.9e-11 71.6 50 68.0
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 1.9e-11 71.6 50 68.0
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 2.5e-11 71.2 50 68.0
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 2.5e-11 71.2 50 66.0
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 2.5e-11 71.2 50 68.0
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 3.2e-11 70.9 50 66.0
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 3.2e-11 70.9 50 66.0
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 3.2e-11 70.9 47 74.5
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 4.2e-11 70.5 50 66.0
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 4.2e-11 70.5 46 71.7
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 4.2e-11 70.5 47 74.5
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 4.2e-11 70.5 50 68.0
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 5.5e-11 70.1 50 66.0
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 5.5e-11 70.1 50 66.0
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 5.5e-11 70.1 50 66.0
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 5.5e-11 70.1 50 66.0
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 5.5e-11 70.1 50 66.0
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 5.5e-11 70.1 50 66.0
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 5.5e-11 70.1 50 70.0
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.5e-11 70.1 49 71.4
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.5e-11 70.1 49 71.4
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 5.5e-11 70.1 49 69.4
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 5.5e-11 70.1 50 68.0
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 7.2e-11 69.7 50 66.0
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 7.2e-11 69.7 50 68.0
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 7.2e-11 69.7 50 68.0
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 7.2e-11 69.7 50 68.0
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 7.2e-11 69.7 47 70.2
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 7.2e-11 69.7 47 70.2
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 7.2e-11 69.7 47 70.2
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 9.4e-11 69.3 50 62.0
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 9.4e-11 69.3 50 66.0
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 9.4e-11 69.3 50 66.0
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 9.4e-11 69.3 50 66.0
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 1.2e-10 68.9 50 64.0
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 1.6e-10 68.6 50 70.0
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 1.6e-10 68.6 46 71.7
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 1.6e-10 68.6 50 60.0
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.6e-10 68.6 46 71.7
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 2.1e-10 68.2 50 62.0
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 2.1e-10 68.2 46 69.6
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 2.1e-10 68.2 47 72.3
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 2.7e-10 67.8 50 62.0
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 3.6e-10 67.4 50 64.0
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 3.6e-10 67.4 47 66.0
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 4.7e-10 67.0 50 62.0
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 1.0e-09 65.9 50 62.0
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 1.0e-09 65.9 50 62.0
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 1.0e-09 65.9 50 62.0
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 1.0e-09 65.9 50 62.0
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 1.0e-09 65.9 50 62.0
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 1.0e-09 65.9 50 60.0
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 1.4e-09 65.5 46 65.2
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 3.0e-09 64.3 50 60.0
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 3.0e-09 64.3 47 63.8
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 3.0e-09 64.3 47 68.1
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 5.1e-09 63.5 47 59.6
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 5.1e-09 63.5 50 54.0
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 5.1e-09 63.5 47 63.8
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 2.0e-08 61.6 50 52.0
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 2.0e-08 61.6 50 52.0
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 9.7e-08 59.3 49 59.2
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 2.8e-07 57.8 50 54.0
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 4.8e-07 57.0 50 52.0
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 6.3e-07 56.6 50 54.0
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 1.1e-06 55.8 47 59.6
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 1.1e-06 55.8 36 80.6
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 2.4e-06 54.7 34 85.3


User provided reference genes

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