Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35984 Trifolium pratense HOM05D000092 ORTHO05D000042 4.3e-80 301.2 146 100.0
Medtr1g442750 Medicago truncatula HOM05D000092 ORTHO05D000042 3.4e-45 185.3 151 60.9
Medtr0006s0080 Medicago truncatula HOM05D000092 ORTHO05D000042 7.6e-45 184.1 151 62.9
Medtr8g059275 Medicago truncatula HOM05D000092 ORTHO05D000042 2.2e-44 182.6 151 60.9
Medtr2g089975 Medicago truncatula HOM05D000092 ORTHO05D000042 2.9e-44 182.2 151 60.9
Medtr0069s0090 Medicago truncatula HOM05D000092 ORTHO05D000042 6.5e-44 181.0 151 61.6
Medtr1g041550 Medicago truncatula HOM05D000092 ORTHO05D000042 6.5e-44 181.0 151 61.6
Medtr0006s0240 Medicago truncatula HOM05D000092 ORTHO05D000042 4.2e-43 178.3 151 59.6
Medtr1g036820 Medicago truncatula HOM05D000092 ORTHO05D000042 4.2e-43 178.3 151 59.6
Medtr0069s0080 Medicago truncatula HOM05D000092 ORTHO05D000042 2.7e-42 175.6 151 59.6
Medtr1g037250 Medicago truncatula HOM05D000092 ORTHO05D000042 2.3e-41 172.6 151 59.6
Medtr1g036750 Medicago truncatula HOM05D000092 ORTHO05D000042 5.1e-41 171.4 146 59.6
TPR.G13803 Trifolium pratense HOM05D000092 ORTHO05D000042 8.7e-41 170.6 151 57.6
Medtr6g464030 Medicago truncatula HOM05D000092 ORTHO05D000042 2.5e-40 169.1 152 59.2
Medtr1g044095 Medicago truncatula HOM05D000092 ORTHO05D000042 7.4e-40 167.5 132 65.2
TPR.G16791 Trifolium pratense HOM05D000092 ORTHO05D000042 2.2e-39 166.0 151 60.3
TPR.G40261 Trifolium pratense HOM05D000092 ORTHO05D000042 6.3e-39 164.5 151 60.3
TPR.G13796 Trifolium pratense HOM05D000092 ORTHO05D000042 1.8e-38 162.9 151 56.3
Medtr1g037010 Medicago truncatula HOM05D000092 ORTHO05D000042 1.5e-37 159.8 152 57.9
TPR.G409 Trifolium pratense HOM05D000092 ORTHO05D000042 1.4e-35 153.3 152 59.2
Medtr1g051625 Medicago truncatula HOM05D000092 ORTHO05D000042 1.9e-35 152.9 152 56.6
TPR.G25268 Trifolium pratense HOM05D000092 ORTHO05D000042 4.2e-35 151.8 151 57.0
Medtr1g044020 Medicago truncatula HOM05D000092 ORTHO05D000042 6.1e-34 147.9 152 55.3
TPR.G25280 Trifolium pratense HOM05D000092 ORTHO05D000042 2.8e-31 139.0 153 54.9
TPR.G13805 Trifolium pratense HOM05D000092 ORTHO05D000042 3.7e-31 138.7 152 53.9
Medtr1g050395 Medicago truncatula HOM05D000092 ORTHO05D000042 1.2e-29 133.7 149 48.3
TPR.G13790 Trifolium pratense HOM05D000092 ORTHO05D000042 3.4e-29 132.1 145 53.1
Medtr0402s0020 Medicago truncatula HOM05D000092 ORTHO05D000042 2.2e-28 129.4 150 47.3
Medtr1g050402 Medicago truncatula HOM05D000092 ORTHO05D000042 2.2e-28 129.4 150 47.3
Medtr1g036580 Medicago truncatula HOM05D000092 ORTHO05D000042 2.6e-24 115.9 105 53.3
TPR.G18289 Trifolium pratense HOM05D000092 ORTHO05D000042 2.6e-24 115.9 147 50.3
arahy.Tifrunner.gnm1.ann1.178VWH Arachis hypogaea HOM05D000092 ORTHO05D000042 2.6e-21 105.9 151 39.1
Ca_13992_v3 Cicer arietinum L. HOM05D000092 ORTHO05D017842 3.8e-20 102.1 124 50.8
arahy.Tifrunner.gnm1.ann1.6L3BCE Arachis hypogaea HOM05D000092 ORTHO05D000042 4.2e-19 98.6 147 37.4
arahy.Tifrunner.gnm1.ann1.CRWA07 Arachis hypogaea HOM05D000092 ORTHO05D000042 9.4e-19 97.4 147 38.1
arahy.Tifrunner.gnm1.ann1.RQU8DI Arachis hypogaea HOM05D000092 ORTHO05D000042 9.4e-19 97.4 135 40.0
arahy.Tifrunner.gnm1.ann1.RR24AQ Arachis hypogaea HOM05D000092 ORTHO05D000042 1.2e-18 97.1 151 37.7
arahy.Tifrunner.gnm1.ann1.DGMY7Y Arachis hypogaea HOM05D000092 ORTHO05D000042 2.7e-18 95.9 141 39.7
TPR.G556 Trifolium pratense HOM05D000092 ORTHO05D000042 1.0e-17 94.0 148 43.2
arahy.Tifrunner.gnm1.ann1.LSW4XK Arachis hypogaea HOM05D000092 ORTHO05D000042 1.8e-17 93.2 135 38.5
Sabra13G0019500 Salix brachista HOM05D000092 ORTHO05D000042 2.6e-13 79.3 147 36.1
Potri.013G015700 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.5e-13 79.0 147 34.7
Potri.013G015900 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.5e-13 79.0 147 34.7
Potri.005G041101 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.3e-12 77.0 149 35.6
Sabra13G0014500 Salix brachista HOM05D000092 ORTHO05D000042 3.8e-12 75.5 147 35.4
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 3.8e-12 75.5 147 35.4
Sabra13G0018100 Salix brachista HOM05D000092 ORTHO05D000042 8.5e-12 74.3 147 34.0
Sabra13G0014100 Salix brachista HOM05D000092 ORTHO05D000042 1.1e-11 73.9 151 36.4
Sabra13G0018200 Salix brachista HOM05D000092 ORTHO05D000042 1.1e-11 73.9 147 34.0
Sabra13G0013800 Salix brachista HOM05D000092 ORTHO05D000042 1.5e-11 73.6 147 35.4
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 1.5e-11 73.6 147 34.0
Potri.005G042900 Populus trichocarpa HOM05D000092 ORTHO05D000042 2.5e-11 72.8 147 34.0
Potri.005G042400 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.2e-11 72.4 147 32.7
Sabra13G0018000 Salix brachista HOM05D000092 ORTHO05D000042 9.4e-11 70.9 147 34.0
Manes.07G060708 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-10 70.5 148 33.1
Manes.07G063100 Manihot esculenta HOM05D000092 ORTHO05D000042 1.6e-10 70.1 112 38.4
Sabra13G0014200 Salix brachista HOM05D000092 ORTHO05D000042 2.1e-10 69.7 147 34.0
Sabra13G0015000 Salix brachista HOM05D000092 ORTHO05D000042 4.7e-10 68.6 147 34.0
Sabra13G0019200 Salix brachista HOM05D000092 ORTHO05D000042 4.7e-10 68.6 147 34.0
Sabra13G0015300 Salix brachista HOM05D000092 ORTHO05D000042 6.1e-10 68.2 151 35.8
Sabra13G0018500 Salix brachista HOM05D000092 ORTHO05D000042 6.1e-10 68.2 147 34.0
Sabra13G0014400 Salix brachista HOM05D000092 ORTHO05D000042 1.4e-09 67.0 154 35.1
Manes.02G215615 Manihot esculenta HOM05D000092 ORTHO05D000042 1.8e-09 66.6 140 34.3
Sabra13G0019000 Salix brachista HOM05D000092 ORTHO05D000042 1.8e-09 66.6 147 32.0
Manes.02G215430 Manihot esculenta HOM05D000092 ORTHO05D000042 3.0e-09 65.9 148 32.4
Manes.07G062324 Manihot esculenta HOM05D000092 ORTHO05D000042 3.0e-09 65.9 149 32.2
Manes.07G061980 Manihot esculenta HOM05D000092 ORTHO05D000042 4.0e-09 65.5 149 32.2
Sabra13G0014900 Salix brachista HOM05D000092 ORTHO05D000042 4.0e-09 65.5 147 33.3
TPR.G15276 Trifolium pratense HOM05D000092 ORTHO05D000042 5.2e-09 65.1 152 34.2
TPR.G29672 Trifolium pratense HOM05D000092 ORTHO05D000042 5.2e-09 65.1 146 30.1
Sabra13G0013900 Salix brachista HOM05D000092 ORTHO05D000042 6.7e-09 64.7 147 32.7
TPR.G712 Trifolium pratense HOM05D000092 ORTHO05D000042 6.7e-09 64.7 150 33.3
Thecc.09G244900 Theobroma cacao HOM05D000092 ORTHO05D000042 8.8e-09 64.3 147 29.9
Manes.07G061500 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 112 35.7
TPR.G23965 Trifolium pratense HOM05D000092 ORTHO05D000042 1.2e-08 63.9 107 38.3
TPR.G28443 Trifolium pratense HOM05D000092 ORTHO05D000042 1.2e-08 63.9 149 33.6
Sabra13G0019600 Salix brachista HOM05D000092 ORTHO05D000042 2.0e-08 63.2 147 33.3
TPR.G35698 Trifolium pratense HOM05D000092 ORTHO05D000042 3.3e-08 62.4 145 32.4
Phvul.010G091500 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 4.4e-08 62.0 95 40.0
arahy.Tifrunner.gnm1.ann1.FV5VRM Arachis hypogaea HOM05D000092 ORTHO05D000042 7.5e-08 61.2 151 33.8
Gorai.013G252900 Gossypium raimondii HOM05D000092 ORTHO05D000042 7.5e-08 61.2 153 28.8
Manes.07G062348 Manihot esculenta HOM05D000092 ORTHO05D000042 7.5e-08 61.2 148 31.1
Medtr6g464050 Medicago truncatula HOM05D000092 ORTHO05D000042 7.5e-08 61.2 150 32.7
Gohir.A13G217800 Gossypium hirsutum HOM05D000092 ORTHO05D000042 9.7e-08 60.8 153 28.8
Medtr0460s0010 Medicago truncatula HOM05D000092 ORTHO05D000042 9.7e-08 60.8 146 31.5
Medtr8g059345 Medicago truncatula HOM05D000092 ORTHO05D000042 9.7e-08 60.8 146 31.5
TPR.G40151 Trifolium pratense HOM05D000092 ORTHO05D000042 9.7e-08 60.8 149 33.6
Manes.11G052130 Manihot esculenta HOM05D000092 ORTHO05D000042 1.3e-07 60.5 149 31.5
Potri.005G061860 Populus trichocarpa HOM05D000092 ORTHO05D000042 1.7e-07 60.1 166 27.7
Manes.02G215305 Manihot esculenta HOM05D000092 ORTHO05D000042 2.2e-07 59.7 140 32.9
Manes.02G215405 Manihot esculenta HOM05D000092 ORTHO05D000042 2.2e-07 59.7 140 33.6
Glyma.01G072300 Glycine max HOM05D000092 ORTHO05D000042 2.8e-07 59.3 110 37.3
Phvul.010G091100 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 2.8e-07 59.3 87 41.4
Phvul.010G091701 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 2.8e-07 59.3 95 37.9
TPR.G40694 Trifolium pratense HOM05D000092 ORTHO05D000042 2.8e-07 59.3 146 30.8
Thecc.05G225000 Theobroma cacao HOM05D000092 ORTHO05D000042 3.7e-07 58.9 139 30.9
TPR.G23975 Trifolium pratense HOM05D000092 ORTHO05D000042 3.7e-07 58.9 146 31.5
Manes.08G163700 Manihot esculenta HOM05D000092 ORTHO05D000042 4.8e-07 58.5 150 30.7
Medtr0012s0150 Medicago truncatula HOM05D000092 ORTHO05D000042 4.8e-07 58.5 146 31.5
TPR.G7038 Trifolium pratense HOM05D000092 ORTHO05D000042 4.8e-07 58.5 110 37.3
TPR.G7392 Trifolium pratense HOM05D000092 ORTHO05D000042 6.3e-07 58.2 149 33.6
arahy.Tifrunner.gnm1.ann1.QT2ZDW Arachis hypogaea HOM05D000092 ORTHO05D000042 8.2e-07 57.8 145 31.7
COL.COLO4_13571 Corchorus olitorius HOM05D000092 ORTHO05D000042 8.2e-07 57.8 101 37.6
COL.COLO4_25660 Corchorus olitorius HOM05D000092 ORTHO05D000042 8.2e-07 57.8 99 40.4
Manes.07G062308 Manihot esculenta HOM05D000092 ORTHO05D000042 8.2e-07 57.8 152 29.6
Manes.07G062340 Manihot esculenta HOM05D000092 ORTHO05D000042 8.2e-07 57.8 149 30.9
Manes.07G062404 Manihot esculenta HOM05D000092 ORTHO05D000042 8.2e-07 57.8 149 30.9
Manes.11G052160 Manihot esculenta HOM05D000092 ORTHO05D000042 8.2e-07 57.8 149 31.5
Thecc.05G245100 Theobroma cacao HOM05D000092 ORTHO05D000042 8.2e-07 57.8 117 32.5
Gorai.011G293900 Gossypium raimondii HOM05D000092 ORTHO05D000042 1.1e-06 57.4 105 38.1
Manes.07G060750 Manihot esculenta HOM05D000092 ORTHO05D000042 1.1e-06 57.4 150 29.3
Medtr0783s0010 Medicago truncatula HOM05D000092 ORTHO05D000042 1.1e-06 57.4 112 35.7
VMungo1383G3284 Vigna mungo HOM05D000092 ORTHO05D000042 1.1e-06 57.4 110 35.5
Eucgr.G00700 Eucalyptus grandis HOM05D000092 ORTHO05D000042 1.4e-06 57.0 149 30.2
Manes.07G062388 Manihot esculenta HOM05D000092 ORTHO05D000042 1.4e-06 57.0 152 28.9
Phvul.010G091200 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 1.4e-06 57.0 95 36.8
Thecc.05G225500 Theobroma cacao HOM05D000092 ORTHO05D000042 1.4e-06 57.0 126 34.1
Gohir.D13G221800 Gossypium hirsutum HOM05D000092 ORTHO05D000042 1.8e-06 56.6 153 28.1
VMungo0331G1940 Vigna mungo HOM05D000092 ORTHO05D000042 1.8e-06 56.6 110 35.5
CiPaw.08G170000 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.4e-06 56.2 126 27.8
Glyma.18G226850 Glycine max HOM05D000092 ORTHO05D000042 2.4e-06 56.2 110 34.5
Medtr1g036870 Medicago truncatula HOM05D000092 ORTHO05D000042 2.4e-06 56.2 146 30.8
TPR.G24374 Trifolium pratense HOM05D000092 ORTHO05D000042 2.4e-06 56.2 95 33.7
Atru.chr1.979 Acer truncatum HOM05D000092 ORTHO05D000042 3.1e-06 55.8 146 30.8
Gohir.D11G270500 Gossypium hirsutum HOM05D000092 ORTHO05D000042 3.1e-06 55.8 100 38.0
Gorai.007G291000 Gossypium raimondii HOM05D000092 ORTHO05D000042 3.1e-06 55.8 100 38.0
Medtr0006s0300 Medicago truncatula HOM05D000092 ORTHO05D000042 3.1e-06 55.8 152 32.2
Medtr1g037150 Medicago truncatula HOM05D000092 ORTHO05D000042 3.1e-06 55.8 107 36.4
VMungo0331G0197 Vigna mungo HOM05D000092 ORTHO05D000042 3.1e-06 55.8 94 36.2
Medtr0006s0230 Medicago truncatula HOM05D000092 ORTHO05D000042 4.1e-06 55.5 146 32.2
TPR.G24012 Trifolium pratense HOM05D000092 ORTHO05D000042 4.1e-06 55.5 140 30.7
VMungo0331G0302 Vigna mungo HOM05D000092 ORTHO05D000042 5.3e-06 55.1 146 30.8
Manes.09G159732 Manihot esculenta HOM05D000092 ORTHO05D000042 7.0e-06 54.7 135 29.6
Medtr0068s0080 Medicago truncatula HOM05D000092 ORTHO05D000042 7.0e-06 54.7 154 32.5
Medtr1g037130 Medicago truncatula HOM05D000092 ORTHO05D000042 7.0e-06 54.7 107 36.4
Medtr1g051585 Medicago truncatula HOM05D000092 ORTHO05D000042 7.0e-06 54.7 146 30.8
Medtr2g072090 Medicago truncatula HOM05D000092 ORTHO05D000042 7.0e-06 54.7 143 28.7
Thecc.05G297500 Theobroma cacao HOM05D000092 ORTHO05D000042 7.0e-06 54.7 150 30.0
arahy.Tifrunner.gnm1.ann1.690WBQ Arachis hypogaea HOM05D000092 ORTHO05D000042 9.1e-06 54.3 141 27.7
arahy.Tifrunner.gnm1.ann1.LZ9MAC Arachis hypogaea HOM05D000092 ORTHO05D000042 9.1e-06 54.3 146 31.5
CiPaw.08G174800 Carya illinoinensis HOM05D000092 ORTHO05D000042 9.1e-06 54.3 122 28.7
COL.COLO4_37555 Corchorus olitorius HOM05D000092 ORTHO05D000042 9.1e-06 54.3 141 27.7
CsaV3_2G010470 Cucumis sativus L. HOM05D000092 ORTHO05D000042 9.1e-06 54.3 101 35.6
Manes.07G060866 Manihot esculenta HOM05D000092 ORTHO05D000042 9.1e-06 54.3 153 26.8


User provided reference genes

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