Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 0.0e+00 1097.0 625 100.0
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 9.9e-251 870.2 631 80.0
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 2.7e-240 835.5 611 80.0
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 2.9e-234 815.5 626 76.2
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 2.0e-203 713.0 628 68.2
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 2.2e-202 709.5 644 67.4
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 2.7e-200 702.6 633 66.2
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 2.2e-194 682.9 637 65.5
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 8.5e-194 681.0 638 65.2
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 3.0e-191 672.5 644 66.3
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 7.5e-190 667.9 638 67.2
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 6.1e-184 648.3 524 73.3
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 4.1e-156 555.8 639 55.2
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 9.2e-156 554.7 640 54.2
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 2.8e-152 543.1 643 53.3
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 3.6e-152 542.7 638 53.3
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 6.2e-152 542.0 636 54.7
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 4.9e-149 532.3 628 54.9
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.2e-147 527.7 630 55.1
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 2.1e-147 526.9 628 53.5
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 4.6e-147 525.8 642 51.2
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 6.0e-147 525.4 605 56.9
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 1.3e-146 524.2 666 50.5
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 9.5e-145 518.1 646 54.0
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 1.8e-143 513.8 636 51.1
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 5.2e-143 512.3 631 50.7
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 7.6e-142 508.4 614 50.3
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 3.8e-141 506.1 637 53.5
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 4.9e-141 505.8 630 50.5
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 1.2e-139 501.1 628 50.6
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 7.3e-137 491.9 628 51.8
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.2e-136 491.1 628 48.6
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 3.6e-136 489.6 640 51.7
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 3.6e-136 489.6 628 48.9
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 2.4e-135 486.9 646 48.5
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.6e-134 483.4 628 48.1
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 2.9e-133 479.9 606 52.5
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.9e-133 479.2 654 45.3
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 4.6e-131 472.6 642 48.6
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 6.6e-130 468.8 639 45.4
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 5.3e-127 459.1 518 54.4
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.3e-122 443.7 621 45.9
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.1e-122 442.6 617 44.2
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 6.7e-122 442.2 604 45.5
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 8.7e-122 441.8 644 46.0
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 1.5e-121 441.0 632 46.4
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 2.5e-121 440.3 669 43.2
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 6.9e-119 432.2 635 44.3
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 9.9e-118 428.3 632 46.5
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 6.4e-117 425.6 611 44.8
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 1.6e-115 421.0 645 47.1
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 4.6e-115 419.5 625 42.9
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 3.9e-114 416.4 624 47.1
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 8.7e-114 415.2 612 44.1
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 8.7e-114 415.2 537 49.2
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 1.1e-113 414.8 643 46.5
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 3.7e-112 409.8 609 47.3
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 3.7e-112 409.8 636 45.3
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 7.6e-110 402.1 604 45.7
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 2.9e-109 400.2 672 44.3
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 3.2e-108 396.7 630 41.1
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 1.6e-107 394.4 633 43.3
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.8e-106 391.0 604 45.7
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 8.7e-106 388.7 627 43.2
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 2.2e-104 384.0 604 47.2
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 8.2e-104 382.1 629 43.9
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 1.8e-103 380.9 520 48.8
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 3.1e-103 380.2 623 43.7
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 5.3e-103 379.4 636 42.3
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 1.2e-102 378.3 607 44.6
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.4e-100 371.3 608 45.9
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 2.5e-100 370.5 459 49.2
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.0e-98 365.2 607 40.9
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.4e-98 364.8 641 41.7
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 1.4e-98 364.8 608 44.9
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 8.8e-98 362.1 608 42.9
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 1.1e-97 361.7 607 43.8
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.5e-97 361.3 689 37.9
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 3.3e-97 360.1 614 44.6
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 2.8e-96 357.1 625 40.0
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 2.8e-96 357.1 533 41.8
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 5.9e-94 349.4 604 41.4
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 1.4e-92 344.7 606 42.7
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.4e-92 344.7 612 45.6
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 1.9e-92 344.4 607 42.8
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 1.9e-92 344.4 382 58.9
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 8.2e-88 328.9 640 38.8
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 1.4e-87 328.2 632 36.7
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 8.5e-85 318.9 612 40.0
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 2.5e-84 317.4 609 41.5
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 3.0e-82 310.5 469 42.2
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 1.7e-80 304.7 303 53.8
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 1.3e-77 295.0 303 51.8
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 3.8e-77 293.5 367 43.6
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 1.6e-75 288.1 611 36.2
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 2.1e-75 287.7 425 43.8
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 1.8e-74 284.6 543 38.3
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 3.3e-73 280.4 558 34.6
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 5.7e-73 279.6 266 53.0
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 6.3e-72 276.2 556 34.9
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 2.1e-67 261.2 253 50.6
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 4.7e-67 260.0 257 51.4
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.3e-66 257.7 551 33.9
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 9.8e-65 252.3 649 31.0
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 7.0e-63 246.1 236 52.1
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 7.7e-62 242.7 461 41.2
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 8.6e-61 239.2 234 50.4
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 2.5e-60 237.7 216 52.8
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.6e-57 227.6 468 39.7
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 3.5e-54 217.2 304 41.4
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 3.5e-54 217.2 470 33.2
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 5.9e-54 216.5 614 31.3
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 7.8e-54 216.1 497 36.0
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.2e-51 208.8 245 45.7
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 2.6e-49 201.1 213 51.2
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 3.7e-48 197.2 226 46.5
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 1.6e-46 191.8 177 51.4
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 6.6e-45 186.4 694 28.4
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 2.8e-43 181.0 276 46.7
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 1.4e-42 178.7 186 54.3
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 6.8e-42 176.4 154 55.2
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 9.8e-41 172.6 392 39.5
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 2.2e-40 171.4 176 45.5
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 8.3e-40 169.5 260 48.1
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.9e-39 168.3 401 39.7
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 4.0e-34 150.6 122 53.3
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 1.2e-33 149.1 119 58.0
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 3.2e-31 141.0 170 35.9
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.9e-29 134.0 275 42.2
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 7.3e-28 129.8 251 41.8
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 7.3e-28 129.8 286 29.0
vmacro16172 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 7.3e-28 129.8 438 35.6
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 1.4e-26 125.6 274 29.6
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.2e-25 122.5 141 51.8
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 1.5e-25 122.1 238 38.7
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 2.2e-24 118.2 161 49.7
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 1.4e-23 115.5 78 71.8
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 1.0e-21 109.4 87 51.7
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 3.9e-21 107.5 217 34.6
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.9e-21 107.5 118 47.5
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 2.5e-20 104.8 92 55.4
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 4.3e-20 104.0 155 43.2
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 5.6e-20 103.6 188 36.2
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 2.1e-19 101.7 262 35.5
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 3.1e-18 97.8 192 38.0
PRCOL_00001147 Prasinoderma coloniale HOM05D003570 ORTHO05D004207 5.3e-18 97.1 280 27.5
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 1.2e-17 95.9 185 34.1
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 5.8e-17 93.6 191 36.6
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 9.9e-17 92.8 343 35.3
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 9.9e-17 92.8 272 33.8
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 1.3e-16 92.4 204 33.8
unitig_22.g6425 Utricularia gibba HOM05D003570 ORTHO05D004207 1.3e-16 92.4 180 40.0
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 1.7e-16 92.0 185 35.1
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 1.7e-16 92.0 185 35.1
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.6e-14 85.5 81 49.4
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 2.1e-14 85.1 109 45.9
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 2.7e-14 84.7 197 36.0
TAR374G0931 Trochodendron aralioides HOM05D003570 ORTHO05D004207 2.7e-14 84.7 499 24.4
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 3.5e-14 84.3 73 60.3
EL10As2g23164 Beta vulgaris HOM05D003570 ORTHO05D004207 1.1e-12 79.3 165 36.4
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 1.1e-12 79.3 157 38.9
FAN18G0384 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.9e-12 78.6 178 31.5
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 2.5e-12 78.2 128 37.5
FvH4_5g15741 Fragaria vesca HOM05D003570 ORTHO05D004207 4.3e-12 77.4 175 32.0
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 1.3e-11 75.9 49 71.4
CARHR253470 Cardamine hirsuta HOM05D003570 ORTHO05D004207 2.4e-10 71.6 136 39.0
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 9.0e-10 69.7 49 61.2
C07p30170 Brassica napus HOM05D003570 ORTHO05D004207 2.6e-09 68.2 70 47.1
C03p39130 Brassica napus HOM05D003570 ORTHO05D004207 3.8e-08 64.3 107 37.4
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 8.4e-08 63.2 239 33.1
C04p53220 Brassica napus HOM05D003570 ORTHO05D004207 2.4e-07 61.6 149 36.9
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 3.2e-07 61.2 84 40.5
AL2G22730 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 4.2e-07 60.8 99 40.4


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