Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35960 Trifolium pratense HOM05D000233 ORTHO05D044702 2.1e-42 175.3 85 100.0
Ca_18927_v3 Cicer arietinum L. HOM05D000233 ORTHO05D000020 1.1e-35 152.9 87 88.5
Medtr4g078710 Medicago truncatula HOM05D000233 ORTHO05D000020 1.6e-31 139.0 83 79.5
Psat7g167840 Pisum sativum HOM05D000233 ORTHO05D000020 1.1e-30 136.3 88 80.7
arahy.Tifrunner.gnm1.ann1.HGAZ7D Arachis hypogaea HOM05D000233 ORTHO05D000020 4.8e-23 110.9 88 65.9
Lj3g0007131 Lotus japonicus HOM05D000233 ORTHO05D000020 2.0e-21 105.5 86 66.3
Lalb_Chr03g0029581 Lupinus albus HOM05D000233 ORTHO05D000020 1.3e-20 102.8 82 70.7
CiPaw.03G180400 Carya illinoinensis HOM05D000233 ORTHO05D000020 7.9e-18 93.6 82 56.1
QL08p039844 Quercus lobata HOM05D000233 ORTHO05D000020 1.1e-16 89.7 80 60.0
QL93p0206_0058 Quercus lobata HOM05D000233 ORTHO05D000020 1.1e-16 89.7 80 60.0
Thecc.02G184000 Theobroma cacao HOM05D000233 ORTHO05D000020 1.1e-14 83.2 76 56.6
Duzib052G1253 Durio zibethinus HOM05D000233 ORTHO05D000020 6.9e-14 80.5 82 50.0
Sed0013416 Sechium edule HOM05D000233 ORTHO05D000020 9.0e-14 80.1 72 54.2
Dinv06871 Davidia involucrata HOM05D000233 ORTHO05D000020 1.2e-13 79.7 75 54.7
Haze_13214 Corylus avellana HOM05D000233 ORTHO05D000020 1.5e-13 79.3 71 57.7
Cfa014648 Carpinus fangiana HOM05D000233 ORTHO05D000020 3.4e-13 78.2 69 59.4
VMungo1127G0898 Vigna mungo HOM05D000233 ORTHO05D000020 3.4e-13 78.2 71 60.6
CANSAT64G1422 Cannabis sativa HOM05D000233 ORTHO05D000020 5.9e-13 77.4 64 57.8
ClCG07G002550 Citrullus lanatus HOM05D000233 ORTHO05D000020 7.7e-13 77.0 71 54.9
Haze_13217 Corylus avellana HOM05D000233 ORTHO05D000020 1.3e-12 76.3 71 56.3
Phvul.011G125200 Phaseolus vulgaris HOM05D000233 ORTHO05D000020 1.3e-12 76.3 71 60.6
Duzib155G0001 Durio zibethinus HOM05D000233 ORTHO05D000020 1.7e-12 75.9 82 48.8
Duzib132G0121 Durio zibethinus HOM05D000233 ORTHO05D000020 2.9e-12 75.1 86 47.7
Potri.017G013700 Populus trichocarpa HOM05D000233 ORTHO05D000020 2.9e-12 75.1 74 55.4
Glyma.06G290000 Glycine max HOM05D000233 ORTHO05D000020 1.1e-11 73.2 67 64.2
Glyma.12G117000 Glycine max HOM05D000233 ORTHO05D000020 1.1e-11 73.2 70 61.4
Duzib248G0810 Durio zibethinus HOM05D000233 ORTHO05D000020 4.2e-11 71.2 82 47.6
CsaV3_7G005810 Cucumis sativus L. HOM05D000233 ORTHO05D000020 7.2e-11 70.5 71 50.7
Potri.007G138100 Populus trichocarpa HOM05D000233 ORTHO05D000020 7.2e-11 70.5 74 50.0
Sabra17G0011200 Salix brachista HOM05D000233 ORTHO05D000020 7.2e-11 70.5 93 47.3
Sabra07G0111300 Salix brachista HOM05D000233 ORTHO05D000020 2.1e-10 68.9 74 51.4
arahy.Tifrunner.gnm1.ann1.KB746A Arachis hypogaea HOM05D000233 ORTHO05D000020 2.7e-10 68.6 84 45.2
Manes.13G143500 Manihot esculenta HOM05D000233 ORTHO05D000020 2.7e-10 68.6 94 50.0
Nn1g04200 Nelumbo nucifera HOM05D000233 ORTHO05D000020 4.6e-10 67.8 82 48.8
Dinv20201 Davidia involucrata HOM05D000233 ORTHO05D000020 7.9e-10 67.0 84 44.0
COL.COLO4_21407 Corchorus olitorius HOM05D000233 ORTHO05D044702 1.8e-09 65.9 54 61.1
arahy.Tifrunner.gnm1.ann1.L00VS1 Arachis hypogaea HOM05D000233 ORTHO05D000020 2.3e-09 65.5 84 42.9
Gohir.D02G178500 Gossypium hirsutum HOM05D000233 ORTHO05D000020 1.5e-08 62.8 85 41.2
Gorai.005G200200 Gossypium raimondii HOM05D000233 ORTHO05D000020 1.5e-08 62.8 85 41.2
TAR626G0716 Trochodendron aralioides HOM05D000233 ORTHO05D000020 1.9e-08 62.4 82 45.1
TAR627G0411 Trochodendron aralioides HOM05D000233 ORTHO05D000020 1.9e-08 62.4 81 43.2
Dinv17342 Davidia involucrata HOM05D000233 ORTHO05D000020 2.5e-08 62.0 90 40.0
CiPaw.11G172200 Carya illinoinensis HOM05D000233 ORTHO05D000020 3.3e-08 61.6 83 49.4
THA.LOC104826039 Tarenaya hassleriana HOM05D000233 ORTHO05D000020 3.3e-08 61.6 70 48.6
TAR629G0609 Trochodendron aralioides HOM05D000233 ORTHO05D000020 4.3e-08 61.2 76 43.4
Atru.chr6.2945 Acer truncatum HOM05D000233 ORTHO05D000020 7.4e-08 60.5 76 48.7
Gohir.A03G155300 Gossypium hirsutum HOM05D000233 ORTHO05D000020 9.7e-08 60.1 85 40.0
CANSAT35G0610 Cannabis sativa HOM05D000233 ORTHO05D000020 1.3e-07 59.7 91 42.9
Aa31LG5G3030 Aethionema arabicum HOM05D000233 ORTHO05D000020 3.7e-07 58.2 70 47.1
CSS0012522 Camellia sinensis var. sinensis HOM05D000233 ORTHO05D000020 3.7e-07 58.2 90 43.3
Actinidia07597 Actinidia chinensis HOM05D000233 ORTHO05D000020 6.3e-07 57.4 87 42.5
Ciclev10016276m.g Citrus clementina HOM05D000233 ORTHO05D000020 1.1e-06 56.6 78 38.5
Rhsim06G0138500 Rhododendron simsii HOM05D000233 ORTHO05D000020 1.1e-06 56.6 90 37.8
CSS0025246 Camellia sinensis var. sinensis HOM05D000233 ORTHO05D000020 1.4e-06 56.2 78 46.2
Actinidia35241 Actinidia chinensis HOM05D000233 ORTHO05D000020 2.4e-06 55.5 82 39.0
Gorai.010G256600 Gossypium raimondii HOM05D000233 ORTHO05D000020 2.4e-06 55.5 79 44.3
CiPaw.12G120100 Carya illinoinensis HOM05D000233 ORTHO05D000020 3.1e-06 55.1 73 49.3
GSVIVG01021098001 Vitis vinifera HOM05D000233 ORTHO05D000020 3.1e-06 55.1 91 38.5
Gohir.D06G209900 Gossypium hirsutum HOM05D000233 ORTHO05D000020 4.1e-06 54.7 79 44.3
CSS0015155 Camellia sinensis var. sinensis HOM05D000233 ORTHO05D000020 5.3e-06 54.3 82 39.0
CSS0038487 Camellia sinensis var. sinensis HOM05D000233 ORTHO05D000020 5.3e-06 54.3 82 39.0


User provided reference genes

Program Settings