Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 2.8e-61 238.4 122 100.0
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 4.4e-46 188.0 122 82.0
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 3.0e-42 175.3 118 78.8
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 4.3e-41 171.4 118 76.3
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 2.8e-40 168.7 119 74.8
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 8.1e-40 167.2 118 75.4
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 4.1e-36 154.8 123 71.5
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 5.4e-36 154.5 122 72.1
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.7e-34 149.4 118 70.3
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 1.5e-33 146.4 123 65.0
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 2.5e-33 145.6 118 68.6
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 4.3e-33 144.8 114 68.4
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 4.3e-33 144.8 119 67.2
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 7.3e-33 144.1 118 66.9
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 2.1e-32 142.5 116 64.7
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 2.1e-32 142.5 118 66.1
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 3.6e-32 141.7 123 64.2
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 4.7e-32 141.4 126 65.9
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 1.4e-31 139.8 109 64.2
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.4e-31 139.8 125 62.4
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 1.8e-31 139.4 119 63.9
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.8e-31 139.4 120 65.8
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.8e-31 139.4 120 65.8
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 3.1e-31 138.7 118 65.3
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 3.1e-31 138.7 117 63.2
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 4.0e-31 138.3 115 65.2
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 4.0e-31 138.3 107 67.3
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.0e-31 138.3 107 67.3
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.0e-31 138.3 99 69.7
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 4.0e-31 138.3 107 67.3
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 4.0e-31 138.3 120 65.8
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 4.0e-31 138.3 73 90.4
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 5.2e-31 137.9 118 63.6
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 5.2e-31 137.9 111 65.8
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 5.2e-31 137.9 118 65.3
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 6.8e-31 137.5 78 84.6
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 6.8e-31 137.5 78 84.6
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 6.8e-31 137.5 118 63.6
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 6.8e-31 137.5 118 63.6
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 6.8e-31 137.5 78 84.6
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 8.9e-31 137.1 123 63.4
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 1.2e-30 136.7 123 61.8
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 1.2e-30 136.7 125 65.6
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.5e-30 136.3 118 62.7
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 2.0e-30 136.0 122 63.1
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 3.4e-30 135.2 123 61.8
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 3.4e-30 135.2 129 59.7
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 3.4e-30 135.2 125 61.6
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 3.4e-30 135.2 119 63.0
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 3.4e-30 135.2 119 61.3
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 3.4e-30 135.2 108 66.7
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 3.4e-30 135.2 123 61.0
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 4.4e-30 134.8 123 62.6
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 4.4e-30 134.8 126 61.1
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 5.8e-30 134.4 101 67.3
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 5.8e-30 134.4 122 65.6
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 5.8e-30 134.4 120 63.3
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 7.6e-30 134.0 127 61.4
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 7.6e-30 134.0 120 65.8
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 9.9e-30 133.7 118 62.7
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 1.3e-29 133.3 118 61.9
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 1.3e-29 133.3 116 62.9
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 1.3e-29 133.3 125 63.2
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 1.7e-29 132.9 104 63.5
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 1.7e-29 132.9 124 60.5
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 2.2e-29 132.5 119 64.7
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 3.8e-29 131.7 125 61.6
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 6.4e-29 131.0 110 62.7
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 6.4e-29 131.0 77 81.8
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 8.4e-29 130.6 122 63.1
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 1.4e-28 129.8 79 79.7
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.9e-28 129.4 77 81.8
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.4e-28 129.0 113 65.5
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 2.4e-28 129.0 78 79.5
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 2.4e-28 129.0 78 82.1
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 2.4e-28 129.0 78 82.1
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 3.2e-28 128.6 87 70.1
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 7.1e-28 127.5 125 59.2
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 7.1e-28 127.5 90 74.4
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.2e-27 126.7 122 62.3
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 4.6e-27 124.8 112 58.0
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 4.6e-27 124.8 120 58.3
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 4.6e-27 124.8 65 90.8
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 1.3e-26 123.2 67 88.1
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 1.7e-26 122.9 127 58.3
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 3.9e-26 121.7 72 83.3
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 3.3e-25 118.6 154 45.5
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 5.6e-25 117.9 67 80.6
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 3.6e-24 115.2 72 73.6
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 5.3e-23 111.3 63 84.1
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 2.2e-21 105.9 145 44.8
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 8.4e-21 104.0 68 66.2
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 3.2e-20 102.1 49 95.9
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 2.1e-19 99.4 102 55.9
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 6.2e-16 87.8 57 66.7
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 2.0e-14 82.8 52 67.3
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 2.9e-13 79.0 58 63.8
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 1.6e-11 73.2 102 43.1


User provided reference genes

Program Settings