Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35795 Trifolium pratense HOM05D000214 ORTHO05D000131 1.9e-53 212.2 106 100.0
TPR.G8742 Trifolium pratense HOM05D000214 ORTHO05D000131 1.7e-14 82.8 54 74.1
Ca_07345_v3 Cicer arietinum L. HOM05D000214 ORTHO05D000131 7.3e-13 77.4 103 43.7
TPR.G40762 Trifolium pratense HOM05D000214 ORTHO05D000131 8.1e-12 73.9 68 60.3
Medtr7g027205 Medicago truncatula HOM05D000214 ORTHO05D000131 5.8e-10 67.8 82 46.3
Lj1g0006237 Lotus japonicus HOM05D000214 ORTHO05D000131 6.4e-09 64.3 85 44.7
Lj1g0014986 Lotus japonicus HOM05D000214 ORTHO05D000131 6.4e-09 64.3 85 44.7
Lj2g0015900 Lotus japonicus HOM05D000214 ORTHO05D000131 6.4e-09 64.3 85 44.7
Lj3g0013193 Lotus japonicus HOM05D000214 ORTHO05D000131 6.4e-09 64.3 85 44.7
Lj3g0019801 Lotus japonicus HOM05D000214 ORTHO05D000131 6.4e-09 64.3 85 44.7
Lj4g0006853 Lotus japonicus HOM05D000214 ORTHO05D000131 6.4e-09 64.3 85 44.7
Lj4g0019962 Lotus japonicus HOM05D000214 ORTHO05D000131 6.4e-09 64.3 85 44.7
Lj5g0018502 Lotus japonicus HOM05D000214 ORTHO05D000131 6.4e-09 64.3 85 44.7
LjContig00049g0024396 Lotus japonicus HOM05D000214 ORTHO05D000131 8.4e-09 63.9 72 47.2
Cc09_g09240 Coffea canephora HOM05D000214 ORTHO05D000131 3.2e-08 62.0 102 36.3
Lj5g0015099 Lotus japonicus HOM05D000214 ORTHO05D000131 7.1e-08 60.8 51 56.9
Hund25822 Selenicereus undatus HOM05D000214 ORTHO05D000131 9.2e-08 60.5 91 38.5
Os11g0433800 Oryza sativa ssp. japonica HOM05D000214 ORTHO05D000131 1.2e-07 60.1 88 43.2
BcaB04g19150 Brassica carinata HOM05D000214 ORTHO05D000131 2.1e-07 59.3 49 59.2
Lj1g0003300 Lotus japonicus HOM05D000214 ORTHO05D000131 2.7e-07 58.9 47 59.6
Lj1g0005097 Lotus japonicus HOM05D000214 ORTHO05D000131 2.7e-07 58.9 47 59.6
LjContig00141g0024663 Lotus japonicus HOM05D000214 ORTHO05D000131 2.7e-07 58.9 47 59.6
TWI12G1376 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.6e-07 58.2 79 41.8
TWI53G0801 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 4.6e-07 58.2 79 41.8
BcaB08g35779 Brassica carinata HOM05D000214 ORTHO05D000131 6.0e-07 57.8 53 52.8
TWI79G1318 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 1.0e-06 57.0 78 42.3
BolC7t45346H Brassica oleracea HOM05D000214 ORTHO05D000131 1.3e-06 56.6 69 50.7
Lj3g0001624 Lotus japonicus HOM05D000214 ORTHO05D000131 1.3e-06 56.6 84 45.2
Hund15479 Selenicereus undatus HOM05D000214 ORTHO05D011049 2.3e-06 55.8 64 37.5
BolC8t46933H Brassica oleracea HOM05D000214 ORTHO05D000131 3.0e-06 55.5 40 62.5
BolC8t48814H Brassica oleracea HOM05D000214 ORTHO05D000131 3.0e-06 55.5 69 49.3
Os07g0546750 Oryza sativa ssp. japonica HOM05D000214 ORTHO05D000131 3.0e-06 55.5 73 39.7
Hund01049 Selenicereus undatus HOM05D000214 ORTHO05D000131 3.0e-06 55.5 82 34.1
Lj2g0003740 Lotus japonicus HOM05D000214 ORTHO05D000131 3.9e-06 55.1 47 57.4
Hund11925 Selenicereus undatus HOM05D000214 ORTHO05D000131 3.9e-06 55.1 82 32.9
TWI32G0887 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.9e-06 55.1 83 37.3
TWI32G1003 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 3.9e-06 55.1 83 38.6
BolC5t34055H Brassica oleracea HOM05D000214 ORTHO05D000131 5.1e-06 54.7 85 38.8
QL07p029514 Quercus lobata HOM05D000214 ORTHO05D000131 5.1e-06 54.7 72 40.3
Hund18181 Selenicereus undatus HOM05D001220 ORTHO05D000110 5.1e-06 54.7 91 36.3
TWI60G0693 Tripterygium wilfordii HOM05D000214 ORTHO05D000131 5.1e-06 54.7 82 40.2
Hund20929 Selenicereus undatus HOM05D000214 ORTHO05D000131 6.6e-06 54.3 83 32.5
Hund26345 Selenicereus undatus HOM05D000214 ORTHO05D000131 6.6e-06 54.3 103 29.1
Hund25102 Selenicereus undatus HOM05D000214 ORTHO05D000131 8.6e-06 53.9 82 32.9


User provided reference genes

Program Settings