Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 4.8e-48 194.1 95 100.0
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 1.3e-32 142.9 82 85.4
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 1.7e-32 142.5 81 87.7
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 3.2e-28 128.3 81 76.5
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 1.2e-27 126.3 81 74.1
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 6.1e-27 124.0 81 71.6
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.5e-25 119.4 80 67.5
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 4.8e-24 114.4 82 67.1
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 2.4e-23 112.1 66 75.8
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 4.1e-23 111.3 69 73.9
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 7.0e-23 110.5 73 68.5
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 7.0e-23 110.5 77 64.9
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 9.1e-23 110.2 78 65.4
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 9.1e-23 110.2 78 65.4
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 9.1e-23 110.2 68 73.5
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.2e-22 109.8 73 69.9
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 1.2e-22 109.8 73 69.9
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 1.6e-22 109.4 74 67.6
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 1.6e-22 109.4 74 67.6
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 2.0e-22 109.0 68 72.1
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 3.5e-22 108.2 66 74.2
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 3.5e-22 108.2 70 70.0
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 4.5e-22 107.8 73 68.5
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 5.9e-22 107.5 77 66.2
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 7.7e-22 107.1 78 65.4
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 7.7e-22 107.1 69 71.0
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 1.0e-21 106.7 70 67.1
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 1.3e-21 106.3 86 64.0
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 1.3e-21 106.3 66 69.7
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.3e-21 106.3 77 64.9
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 1.3e-21 106.3 68 67.6
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 1.7e-21 105.9 68 66.2
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 1.7e-21 105.9 68 69.1
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 1.7e-21 105.9 64 71.9
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 1.7e-21 105.9 66 69.7
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 1.7e-21 105.9 70 68.6
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 2.2e-21 105.5 72 70.8
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 2.2e-21 105.5 72 70.8
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 2.9e-21 105.1 77 64.9
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 2.9e-21 105.1 74 64.9
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 3.8e-21 104.8 67 68.7
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 3.8e-21 104.8 79 60.8
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 5.0e-21 104.4 68 63.2
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 5.0e-21 104.4 68 63.2
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 6.5e-21 104.0 68 67.6
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 6.5e-21 104.0 70 65.7
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 6.5e-21 104.0 70 65.7
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 8.5e-21 103.6 64 67.2
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 8.5e-21 103.6 69 62.3
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 1.5e-20 102.8 66 66.7
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 1.5e-20 102.8 95 55.8
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 1.5e-20 102.8 65 69.2
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 2.5e-20 102.1 66 69.7
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 3.2e-20 101.7 71 64.8
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 3.2e-20 101.7 72 66.7
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 4.2e-20 101.3 71 66.2
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 5.5e-20 100.9 69 60.9
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 7.2e-20 100.5 82 59.8
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 9.4e-20 100.1 70 64.3
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 9.4e-20 100.1 64 67.2
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 1.2e-19 99.8 74 59.5
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 1.2e-19 99.8 59 76.3
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 1.6e-19 99.4 74 59.5
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 2.1e-19 99.0 60 71.7
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 2.1e-19 99.0 60 71.7
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 2.1e-19 99.0 63 68.3
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 2.7e-19 98.6 60 70.0
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 2.7e-19 98.6 70 61.4
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 3.6e-19 98.2 68 60.3
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 3.6e-19 98.2 68 60.3
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 3.6e-19 98.2 68 60.3
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 4.7e-19 97.8 62 69.4
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 6.1e-19 97.4 61 70.5
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 8.0e-19 97.1 60 70.0
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 1.0e-18 96.7 60 70.0
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 1.4e-18 96.3 77 57.1
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 1.4e-18 96.3 75 60.0
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 1.4e-18 96.3 61 70.5
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 1.4e-18 96.3 61 68.9
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 1.4e-18 96.3 61 70.5
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 1.4e-18 96.3 60 70.0
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 2.3e-18 95.5 64 70.3
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 6.8e-18 94.0 61 67.2
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 6.8e-18 94.0 62 64.5
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 8.8e-18 93.6 68 63.2
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 1.5e-17 92.8 70 57.1
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 7.5e-17 90.5 117 46.2
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 1.7e-16 89.4 50 76.0
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 2.2e-16 89.0 55 74.5
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 6.3e-16 87.4 54 66.7
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 1.4e-15 86.3 54 68.5
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 1.8e-15 85.9 78 50.0
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 9.1e-15 83.6 48 75.0
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 9.1e-15 83.6 48 75.0
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 9.1e-15 83.6 96 44.8
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 1.6e-14 82.8 58 56.9
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 3.5e-14 81.6 95 46.3
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 3.5e-14 81.6 63 50.8
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 4.5e-14 81.3 79 49.4
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 4.5e-14 81.3 79 49.4
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.3e-13 79.7 69 53.6
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 3.2e-12 75.1 44 77.3
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.2e-11 73.2 43 72.1
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 3.6e-11 71.6 49 59.2
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 2.3e-10 68.9 42 71.4
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 4.9e-08 61.2 28 89.3
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 1.8e-07 59.3 79 41.8
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 2.4e-07 58.9 65 41.5
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 7.0e-07 57.4 28 89.3
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 1.6e-06 56.2 62 38.7


User provided reference genes

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