Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 2.8e-162 575.5 348 100.0
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 7.9e-141 504.2 354 81.9
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 1.1e-118 430.6 327 74.9
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 8.9e-100 367.9 266 80.5
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 1.2e-99 367.5 355 61.7
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 6.4e-98 361.7 353 60.6
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 6.6e-95 351.7 395 61.3
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 6.2e-93 345.1 353 58.9
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 1.4e-92 344.0 354 59.6
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 3.3e-86 322.8 348 56.9
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 1.4e-84 317.4 351 57.0
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 6.2e-77 292.0 348 52.0
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 5.8e-75 285.4 359 51.8
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.3e-74 284.3 359 51.5
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 6.4e-74 282.0 346 52.0
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.1e-73 281.2 346 50.6
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 5.4e-73 278.9 351 51.0
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 7.1e-73 278.5 350 51.7
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 1.7e-71 273.9 348 51.1
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 5.1e-71 272.3 349 50.7
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 6.6e-71 271.9 348 50.6
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 7.3e-70 268.5 324 51.5
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 9.6e-70 268.1 353 49.6
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 4.8e-69 265.8 350 49.7
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 6.2e-69 265.4 352 48.0
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 8.1e-69 265.0 330 51.8
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 8.1e-69 265.0 347 51.6
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.1e-68 264.6 349 50.1
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 1.1e-68 264.6 351 46.7
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 2.4e-68 263.5 338 53.6
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.4e-68 263.5 349 50.4
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 2.4e-68 263.5 360 50.8
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 3.1e-68 263.1 349 48.7
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 6.9e-68 261.9 354 50.3
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.5e-67 260.8 353 48.7
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 1.5e-67 260.8 352 49.4
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.5e-67 260.8 351 49.3
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 1.5e-67 260.8 354 51.4
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 2.0e-67 260.4 351 49.0
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 4.4e-67 259.2 321 52.0
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.2e-66 256.9 336 48.5
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 2.9e-66 256.5 355 53.8
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 2.9e-66 256.5 340 47.6
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.9e-66 255.8 349 49.6
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 6.4e-66 255.4 363 51.8
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 8.4e-66 255.0 348 49.4
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.4e-65 254.2 357 52.1
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 3.2e-65 253.1 346 49.4
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 1.6e-64 250.8 336 52.1
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 2.1e-64 250.4 345 51.9
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 3.5e-64 249.6 351 51.3
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.3e-63 247.7 334 47.3
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 3.0e-63 246.5 356 52.5
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 6.6e-63 245.4 324 48.8
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 8.7e-63 245.0 346 51.4
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.5e-62 244.2 346 46.8
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 3.3e-62 243.0 329 48.0
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 4.3e-62 242.7 348 52.0
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 5.6e-62 242.3 298 50.0
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 9.6e-62 241.5 325 47.4
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 3.6e-61 239.6 348 45.7
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 4.8e-61 239.2 217 62.7
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 4.8e-61 239.2 346 46.0
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 6.2e-61 238.8 352 50.9
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 1.4e-60 237.7 349 51.3
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 3.1e-60 236.5 311 54.7
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.1e-60 236.5 354 46.6
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 5.3e-60 235.7 328 47.3
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 9.0e-60 235.0 348 45.7
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 9.0e-60 235.0 338 45.6
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 2.6e-59 233.4 353 44.5
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 7.6e-59 231.9 302 50.3
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.7e-58 230.7 347 43.5
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 2.2e-58 230.3 354 50.6
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.9e-58 229.9 354 50.3
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 3.8e-58 229.6 377 43.2
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 3.8e-58 229.6 347 44.4
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 4.9e-58 229.2 350 45.1
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 1.1e-57 228.0 304 53.3
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 1.4e-57 227.6 371 42.9
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 2.4e-57 226.9 353 49.6
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 4.2e-57 226.1 348 44.5
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 2.7e-56 223.4 302 47.0
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 4.6e-56 222.6 351 45.0
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 1.0e-55 221.5 351 43.9
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 1.3e-55 221.1 220 56.8
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 1.8e-55 220.7 347 48.7
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 2.3e-55 220.3 358 44.7
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 3.0e-55 219.9 348 47.1
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 3.9e-55 219.5 350 43.1
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 3.9e-55 219.5 202 60.4
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 6.7e-55 218.8 301 44.9
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 8.7e-55 218.4 314 47.1
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 1.1e-54 218.0 350 42.6
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 4.3e-54 216.1 366 42.6
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 1.6e-53 214.2 404 40.6
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 8.1e-53 211.8 355 42.3
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.8e-52 210.7 377 46.7
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 5.3e-52 209.1 252 49.6
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 5.3e-52 209.1 215 54.9
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 1.0e-50 204.9 240 54.6
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 1.3e-50 204.5 348 41.4
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.7e-50 204.1 336 42.6
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 1.1e-49 201.4 279 53.4
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 3.2e-49 199.9 176 63.6
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 3.2e-49 199.9 357 40.6
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 1.6e-48 197.6 263 54.8
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 2.7e-48 196.8 221 52.5
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.0e-47 194.9 310 44.8
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 5.1e-47 192.6 355 40.3
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 9.6e-46 188.3 378 40.7
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 1.8e-44 184.1 347 45.0
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.4e-43 179.9 306 43.8
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 5.9e-43 179.1 142 69.0
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 2.1e-40 170.6 209 47.8
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 2.5e-38 163.7 112 75.9
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 2.5e-38 163.7 211 48.3
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 9.7e-38 161.8 202 48.0
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 2.2e-37 160.6 336 39.9
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 3.7e-37 159.8 114 73.7
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 7.7e-35 152.1 128 61.7
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 8.5e-34 148.7 373 35.4
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 8.5e-34 148.7 340 37.9
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 4.2e-33 146.4 111 70.3
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 7.9e-32 142.1 119 63.0
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 1.3e-26 124.8 226 38.9
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 6.7e-23 112.5 68 83.8
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 6.7e-23 112.5 202 42.1
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 1.6e-19 101.3 201 33.8
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 4.2e-17 93.2 121 52.1
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 4.7e-16 89.7 206 33.0
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 5.7e-14 82.8 218 33.0
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.1e-12 78.6 180 31.1
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 1.1e-12 78.6 180 31.1
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 1.6e-08 64.7 107 38.3
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 2.7e-08 63.9 64 56.2
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 3.0e-07 60.5 272 29.8


User provided reference genes

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