Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35641 Trifolium pratense HOM05D000833 ORTHO05D000969 1.2e-90 336.7 183 100.0
TPR.G11248 Trifolium pratense HOM05D000833 ORTHO05D000969 6.0e-71 271.2 183 82.0
Ca_22221_v3 Cicer arietinum L. HOM05D000833 ORTHO05D000969 1.3e-46 190.3 184 68.5
Psat4g089760 Pisum sativum HOM05D000833 ORTHO05D000969 1.3e-33 147.1 125 75.2
Lj4g0022062 Lotus japonicus HOM05D000833 ORTHO05D000969 6.7e-30 134.8 192 52.6
VMungo0251G2713 Vigna mungo HOM05D000833 ORTHO05D000969 1.5e-21 107.1 226 42.0
Lalb_Chr05g0226941 Lupinus albus HOM05D000833 ORTHO05D000969 1.6e-20 103.6 221 42.5
Medtr8g079010 Medicago truncatula HOM05D000833 ORTHO05D000969 1.4e-19 100.5 180 47.2
Phvul.003G248900 Phaseolus vulgaris HOM05D000833 ORTHO05D000969 1.8e-19 100.1 225 42.2
Glyma.16G144600 Glycine max HOM05D000833 ORTHO05D000969 2.2e-17 93.2 215 41.9
Medtr5g018510 Medicago truncatula HOM05D000833 ORTHO05D000969 4.6e-15 85.5 244 36.5
VMungo1215G1961 Vigna mungo HOM05D000833 ORTHO05D000969 1.8e-14 83.6 251 35.5
Ca_24804_v3 Cicer arietinum L. HOM05D000833 ORTHO05D000969 3.0e-14 82.8 267 34.5
Lalb_Chr09g0322881 Lupinus albus HOM05D000833 ORTHO05D000969 5.1e-14 82.0 253 36.0
TPR.G11339 Trifolium pratense HOM05D000833 ORTHO05D000969 1.1e-13 80.9 267 34.8
Lalb_Chr05g0213101 Lupinus albus HOM05D000833 ORTHO05D000969 5.7e-13 78.6 235 36.6
Phvul.002G023000 Phaseolus vulgaris HOM05D000833 ORTHO05D000969 5.7e-13 78.6 254 35.0
Psat2g164040 Pisum sativum HOM05D000833 ORTHO05D000969 5.7e-13 78.6 269 34.2
Glyma.01G182000 Glycine max HOM05D000833 ORTHO05D000969 9.7e-13 77.8 251 34.7
arahy.Tifrunner.gnm1.ann1.04P64Q Arachis hypogaea HOM05D000833 ORTHO05D000969 2.2e-12 76.6 256 32.8
arahy.Tifrunner.gnm1.ann1.IES0YP Arachis hypogaea HOM05D000833 ORTHO05D000969 2.8e-12 76.3 256 32.8
Glyma.11G060300 Glycine max HOM05D000833 ORTHO05D000969 3.7e-12 75.9 247 34.4
Ciclev10024811m.g Citrus clementina HOM05D000833 ORTHO05D000969 5.3e-11 72.0 264 35.2
ClCG01G016530 Citrullus lanatus HOM05D000833 ORTHO05D000969 9.0e-11 71.2 302 30.5
TWI53G0111 Tripterygium wilfordii HOM05D000833 ORTHO05D000969 9.0e-11 71.2 260 33.1
Atru.chr3.462 Acer truncatum HOM05D000833 ORTHO05D000969 1.2e-10 70.9 288 33.0
RcHm_v2.0_Chr2g0103371 Rosa chinensis HOM05D000833 ORTHO05D000969 1.2e-10 70.9 262 34.4
Sed0005996 Sechium edule HOM05D000833 ORTHO05D000969 1.5e-10 70.5 288 30.2
Sp4g02460 Schrenkiella parvula HOM05D000833 ORTHO05D000969 2.0e-10 70.1 250 34.4
Cfa004226 Carpinus fangiana HOM05D000833 ORTHO05D000969 2.6e-10 69.7 91 54.9
Thhalv10000039m.g Eutrema salsugineum HOM05D000833 ORTHO05D000969 2.6e-10 69.7 236 35.2
Prupe.7G144400 Prunus persica HOM05D000833 ORTHO05D000969 2.6e-10 69.7 235 36.2
CANSAT01G2586 Cannabis sativa HOM05D000833 ORTHO05D000969 3.4e-10 69.3 108 47.2
Lj2g0022463 Lotus japonicus HOM05D000833 ORTHO05D000969 4.5e-10 68.9 263 31.2
AL4G13450 Arabidopsis lyrata HOM05D000833 ORTHO05D000969 7.7e-10 68.2 226 35.8
MELO3C007520.2 Cucumis melo HOM05D000833 ORTHO05D000969 7.7e-10 68.2 187 35.3
COL.COLO4_22191 Corchorus olitorius HOM05D000833 ORTHO05D000969 1.0e-09 67.8 256 33.6
Thecc.01G046400 Theobroma cacao HOM05D000833 ORTHO05D000969 1.7e-09 67.0 254 32.7
CsaV3_6G042800 Cucumis sativus L. HOM05D000833 ORTHO05D000969 2.2e-09 66.6 300 30.3
BraA04t17410Z Brassica rapa HOM05D000833 ORTHO05D000969 2.9e-09 66.2 200 36.5
Aa31LG7G13520 Aethionema arabicum HOM05D000833 ORTHO05D000969 5.0e-09 65.5 265 30.9
Dinv39911 Davidia involucrata HOM05D000833 ORTHO05D000969 5.0e-09 65.5 89 49.4
Duzib187G1675 Durio zibethinus HOM05D000833 ORTHO05D000969 5.0e-09 65.5 253 32.4
Potri.007G035200 Populus trichocarpa HOM05D000833 ORTHO05D000969 6.5e-09 65.1 252 34.1
BolC4t26846H Brassica oleracea HOM05D000833 ORTHO05D000969 1.1e-08 64.3 203 35.5
Gohir.A02G161100 Gossypium hirsutum HOM05D000833 ORTHO05D000969 1.1e-08 64.3 255 32.9
Gohir.D03G019400 Gossypium hirsutum HOM05D000833 ORTHO05D000969 1.1e-08 64.3 255 32.9
MD02G1159500 Malus domestica HOM05D000833 ORTHO05D000969 1.4e-08 63.9 238 33.2
FAN28G0501 Fragaria x ananassa HOM05D000833 ORTHO05D000969 1.9e-08 63.5 235 33.6
AT2G23460 Arabidopsis thaliana HOM05D000833 ORTHO05D000969 2.5e-08 63.2 220 34.5
A04p17900 Brassica napus HOM05D000833 ORTHO05D000969 3.2e-08 62.8 196 36.2
CiPaw.01G028100 Carya illinoinensis HOM05D000833 ORTHO05D000969 3.2e-08 62.8 115 43.5
Gorai.003G019800 Gossypium raimondii HOM05D000833 ORTHO05D000969 3.2e-08 62.8 255 32.5
FvH4_1g14590 Fragaria vesca HOM05D000833 ORTHO05D000969 4.2e-08 62.4 237 32.9
FAN19G1800 Fragaria x ananassa HOM05D000833 ORTHO05D000969 4.2e-08 62.4 236 33.9
FAN26G2226 Fragaria x ananassa HOM05D000833 ORTHO05D000969 4.2e-08 62.4 235 34.9
FAN23G0151 Fragaria x ananassa HOM05D000833 ORTHO05D000969 5.5e-08 62.0 230 33.5
Sabra07G0030600 Salix brachista HOM05D000833 ORTHO05D000969 7.2e-08 61.6 252 32.9
C04p52810 Brassica napus HOM05D000833 ORTHO05D000969 9.4e-08 61.2 203 35.0
Lj4C136T11 Lonicera japonica HOM05D000833 ORTHO05D000969 9.4e-08 61.2 90 47.8
Oeu039059.1 Olea europaea HOM05D000833 ORTHO05D000969 9.4e-08 61.2 157 36.9
CAN.G836.25 Capsicum annuum HOM05D000833 ORTHO05D000969 1.2e-07 60.8 88 46.6
Peaxi162Scf00535g00723 Petunia axillaris HOM05D000833 ORTHO05D000969 1.2e-07 60.8 102 46.1
Manes.13G131400 Manihot esculenta HOM05D000833 ORTHO05D000969 1.6e-07 60.5 259 32.4
MD00G1067300 Malus domestica HOM05D000833 ORTHO05D000969 2.1e-07 60.1 235 33.6
CSS0050277 Camellia sinensis var. sinensis HOM05D000833 ORTHO05D000969 2.7e-07 59.7 90 46.7
Carub.0004s0269 Capsella rubella HOM05D000833 ORTHO05D000969 3.6e-07 59.3 217 32.3
Cc07_g05450 Coffea canephora HOM05D000833 ORTHO05D000969 4.6e-07 58.9 109 45.0
Hund16563 Selenicereus undatus HOM05D000833 ORTHO05D000969 4.6e-07 58.9 115 38.3
CSS0005744 Camellia sinensis var. sinensis HOM05D000833 ORTHO05D000969 6.1e-07 58.5 96 43.8
Duzib147G0267 Durio zibethinus HOM05D000833 ORTHO05D000969 6.1e-07 58.5 254 29.5
Ah.03g142060 Amaranthus hybridus HOM05D000833 ORTHO05D000969 7.9e-07 58.2 98 38.8
Sopen02g034850 Solanum pennellii HOM05D000833 ORTHO05D000969 7.9e-07 58.2 93 44.1
CiPaw.02G013100 Carya illinoinensis HOM05D000833 ORTHO05D000969 1.4e-06 57.4 88 45.5
Potri.005G131200 Populus trichocarpa HOM05D000833 ORTHO05D000969 1.4e-06 57.4 246 32.5
arahy.Tifrunner.gnm1.ann1.1233S2 Arachis hypogaea HOM05D000833 ORTHO05D000969 1.8e-06 57.0 168 35.1
PGSC0003DMG400010080 Solanum tuberosum HOM05D000833 ORTHO05D000969 1.8e-06 57.0 88 45.5
TWI09G0814 Tripterygium wilfordii HOM05D000833 ORTHO05D000969 1.8e-06 57.0 273 30.4
EL10Ac6g14831 Beta vulgaris HOM05D000833 ORTHO05D000969 2.3e-06 56.6 89 41.6
THA.LOC104807578 Tarenaya hassleriana HOM05D000833 ORTHO05D000969 2.3e-06 56.6 270 30.0
AUR62003243 Chenopodium quinoa HOM05D000833 ORTHO05D000969 3.0e-06 56.2 105 41.9
AUR62027227 Chenopodium quinoa HOM05D000833 ORTHO05D000969 3.0e-06 56.2 89 42.7
Solyc02g090160.3 Solanum lycopersicum HOM05D000833 ORTHO05D000969 3.0e-06 56.2 93 43.0
TAR628G0111 Trochodendron aralioides HOM05D000833 ORTHO05D000969 3.9e-06 55.8 117 41.0
arahy.Tifrunner.gnm1.ann1.B018JM Arachis hypogaea HOM05D000833 ORTHO05D000969 5.1e-06 55.5 158 35.4
vmacro17891 Vaccinium macrocarpon HOM05D000833 ORTHO05D000969 6.7e-06 55.1 94 42.6
Aqoxy6G00948 Aquilegia oxysepala HOM05D000833 ORTHO05D000969 8.8e-06 54.7 126 34.9


User provided reference genes

Program Settings