Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35624 Trifolium pratense HOM05D001766 ORTHO05D024730 3.2e-50 201.4 100 100.0
TPR.G20071 Trifolium pratense HOM05D001766 ORTHO05D024730 6.9e-21 104.0 60 90.0
TPR.G40169 Trifolium pratense HOM05D001766 ORTHO05D001875 5.1e-16 87.8 76 67.1
TPR.G29087 Trifolium pratense HOM05D001766 ORTHO05D001875 2.0e-12 75.9 75 64.0
Psat2g177400 Pisum sativum HOM05D001766 ORTHO05D001875 1.0e-11 73.6 74 55.4
TPR.G21944 Trifolium pratense HOM05D001766 ORTHO05D001875 4.9e-11 71.2 43 76.7
Ca_24595_v3 Cicer arietinum L. HOM05D001766 ORTHO05D001875 9.3e-10 67.0 76 55.3
Medtr5g013020 Medicago truncatula HOM05D001766 ORTHO05D001875 1.6e-09 66.2 76 55.3
Lj2g0012296 Lotus japonicus HOM05D001766 ORTHO05D001875 4.6e-09 64.7 55 61.8
VMungo1215G2095 Vigna mungo HOM05D001766 ORTHO05D001875 4.6e-09 64.7 59 59.3
arahy.Tifrunner.gnm1.ann1.NN5THJ Arachis hypogaea HOM05D001766 ORTHO05D001875 1.3e-08 63.2 63 52.4
arahy.Tifrunner.gnm1.ann1.V17G3V Arachis hypogaea HOM05D001766 ORTHO05D001875 1.3e-08 63.2 63 52.4
Lalb_Chr16g0379451 Lupinus albus HOM05D001766 ORTHO05D001875 2.3e-08 62.4 55 56.4
Phvul.002G056200 Phaseolus vulgaris HOM05D001766 ORTHO05D001875 2.3e-08 62.4 56 58.9
Gorai.008G233000 Gossypium raimondii HOM05D001766 ORTHO05D001875 6.7e-08 60.8 74 48.6
CANSAT21G0959 Cannabis sativa HOM05D001766 ORTHO05D001875 4.3e-07 58.2 54 51.9
Sed0000728 Sechium edule HOM05D001766 ORTHO05D001875 5.7e-07 57.8 55 50.9
Glyma.01G207200 Glycine max HOM05D001766 ORTHO05D001875 1.3e-06 56.6 56 57.1
Ciclev10020946m.g Citrus clementina HOM05D001766 ORTHO05D001875 1.6e-06 56.2 54 51.9
Atru.chr9.1255 Acer truncatum HOM05D001766 ORTHO05D001875 2.1e-06 55.8 59 52.5
CiPaw.11G083100 Carya illinoinensis HOM05D001766 ORTHO05D001875 2.8e-06 55.5 52 51.9
Glyma.11G036032 Glycine max HOM05D001766 ORTHO05D024730 2.8e-06 55.5 81 38.3
Potri.001G154600 Populus trichocarpa HOM05D001766 ORTHO05D001875 2.8e-06 55.5 50 52.0
Aa31LG6G210 Aethionema arabicum HOM05D001766 ORTHO05D001875 3.7e-06 55.1 49 53.1
Potri.003G080100 Populus trichocarpa HOM05D001766 ORTHO05D001875 4.8e-06 54.7 50 50.0
SGA_v2.0_scaffold199G41190 Striga asiatica HOM05D001766 ORTHO05D001875 4.8e-06 54.7 52 53.8
CSS0044715 Camellia sinensis var. sinensis HOM05D001766 ORTHO05D001875 8.2e-06 53.9 45 53.3
CsaV3_3G002510 Cucumis sativus L. HOM05D001766 ORTHO05D001875 8.2e-06 53.9 55 50.9
Duzib205G1428 Durio zibethinus HOM05D001766 ORTHO05D001875 8.2e-06 53.9 52 53.8
PGR042G2193 Punica granatum HOM05D001766 ORTHO05D001875 8.2e-06 53.9 58 46.6
QL12p010900 Quercus lobata HOM05D001766 ORTHO05D001875 8.2e-06 53.9 51 54.9


User provided reference genes

Program Settings