Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 4.2e-45 184.5 106 100.0
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 1.5e-26 122.9 111 72.1
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 4.9e-25 117.9 110 71.8
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 6.4e-25 117.5 109 61.5
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 1.6e-23 112.8 108 70.4
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 5.0e-22 107.8 105 60.0
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 3.3e-21 105.1 106 60.4
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 4.3e-21 104.8 105 59.0
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 2.8e-20 102.1 106 58.5
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 3.1e-19 98.6 107 59.8
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 6.8e-19 97.4 100 55.0
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 2.6e-18 95.5 105 54.3
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 3.4e-18 95.1 105 55.2
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 4.4e-18 94.7 97 55.7
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 4.4e-18 94.7 105 55.2
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 7.5e-18 94.0 105 55.2
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 9.8e-18 93.6 108 56.5
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 9.8e-18 93.6 108 56.5
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 1.3e-17 93.2 105 55.2
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 2.2e-17 92.4 105 51.4
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 2.2e-17 92.4 105 55.2
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 3.7e-17 91.7 108 51.9
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 3.7e-17 91.7 105 51.4
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 6.4e-17 90.9 105 53.3
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 6.4e-17 90.9 102 60.8
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 6.4e-17 90.9 105 59.0
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.4e-16 89.7 105 51.4
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 1.9e-16 89.4 105 50.5
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 1.9e-16 89.4 95 54.7
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 3.2e-16 88.6 106 50.9
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 4.1e-16 88.2 106 51.9
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 7.1e-16 87.4 105 52.4
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 7.1e-16 87.4 106 49.1
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 1.2e-15 86.7 105 48.6
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 1.2e-15 86.7 105 50.5
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 1.2e-15 86.7 105 50.5
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 1.6e-15 86.3 101 49.5
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 2.7e-15 85.5 106 50.9
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 2.7e-15 85.5 105 52.4
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 3.5e-15 85.1 102 51.0
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 3.5e-15 85.1 104 51.0
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 4.6e-15 84.7 106 50.0
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 4.6e-15 84.7 106 46.2
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 6.0e-15 84.3 100 50.0
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 7.8e-15 84.0 106 48.1
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 7.8e-15 84.0 105 47.6
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 1.3e-14 83.2 106 50.9
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 1.7e-14 82.8 103 50.5
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 1.7e-14 82.8 97 52.6
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 3.9e-14 81.6 87 59.8
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 3.9e-14 81.6 102 48.0
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 3.9e-14 81.6 102 51.0
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 3.9e-14 81.6 106 51.9
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 5.1e-14 81.3 95 49.5
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 6.6e-14 80.9 102 49.0
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.5e-13 79.7 99 47.5
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 1.5e-13 79.7 103 47.6
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 1.5e-13 79.7 107 49.5
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 2.5e-13 79.0 105 48.6
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 3.3e-13 78.6 102 47.1
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 3.3e-13 78.6 102 47.1
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 3.3e-13 78.6 105 44.8
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 7.3e-13 77.4 94 48.9
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 9.5e-13 77.0 94 48.9
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 9.5e-13 77.0 110 46.4
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 1.2e-12 76.6 104 47.1
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 1.2e-12 76.6 105 45.7
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 1.2e-12 76.6 100 48.0
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 1.6e-12 76.3 94 47.9
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 2.1e-12 75.9 105 45.7
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 2.1e-12 75.9 105 43.8
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 2.1e-12 75.9 102 47.1
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 2.8e-12 75.5 101 52.5
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 2.8e-12 75.5 107 45.8
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 2.8e-12 75.5 102 47.1
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 2.8e-12 75.5 102 47.1
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 3.6e-12 75.1 102 47.1
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 3.6e-12 75.1 132 41.7
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 4.7e-12 74.7 107 46.7
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 4.7e-12 74.7 93 52.7
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 8.1e-12 73.9 106 44.3
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 8.1e-12 73.9 106 44.3
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 8.1e-12 73.9 102 46.1
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.4e-11 73.2 114 42.1
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 1.4e-11 73.2 105 43.8
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 1.8e-11 72.8 95 47.4
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 1.8e-11 72.8 95 47.4
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 2.3e-11 72.4 114 41.2
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 2.3e-11 72.4 102 45.1
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 3.1e-11 72.0 98 46.9
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 3.1e-11 72.0 98 46.9
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.0e-11 71.6 113 41.6
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 5.2e-11 71.2 99 42.4
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 1.2e-10 70.1 130 40.8
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 2.0e-10 69.3 96 44.8
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 2.6e-10 68.9 102 43.1
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 5.8e-10 67.8 106 49.1
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 2.2e-09 65.9 50 70.0
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 6.4e-09 64.3 47 68.1
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 1.1e-08 63.5 120 37.5
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 1.1e-08 63.5 88 42.0
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 1.1e-08 63.5 105 38.1
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 4.1e-08 61.6 36 72.2
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 4.1e-08 61.6 36 72.2
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 4.1e-08 61.6 105 38.1
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 2.7e-07 58.9 43 62.8
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 7.8e-07 57.4 95 42.1
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 1.0e-06 57.0 82 43.9
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 1.7e-06 56.2 108 36.1
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.3e-06 55.8 108 36.1
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.3e-06 55.8 108 36.1
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 3.9e-06 55.1 110 36.4
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 8.6e-06 53.9 95 40.0


User provided reference genes

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