Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35587 Trifolium pratense HOM05D004165 ORTHO05D005063 3.9e-31 137.5 70 100.0
TPR.G2291 Trifolium pratense HOM05D004165 ORTHO05D005063 1.3e-29 132.5 70 97.1
Ca_17683_v3 Cicer arietinum L. HOM05D004165 ORTHO05D005063 3.7e-29 131.0 70 95.7
Lj4g0014922 Lotus japonicus HOM05D004165 ORTHO05D005063 1.4e-28 129.0 70 92.9
Medtr8g092100 Medicago truncatula HOM05D004165 ORTHO05D005063 1.8e-28 128.6 70 92.9
Dinv21242 Davidia involucrata HOM05D004165 ORTHO05D005063 6.9e-28 126.7 70 90.0
Atru.chr4.460 Acer truncatum HOM05D004165 ORTHO05D005063 9.1e-28 126.3 70 90.0
Psat7g050200 Pisum sativum HOM05D004165 ORTHO05D005063 5.9e-27 123.6 69 92.8
arahy.Tifrunner.gnm1.ann1.F6TX6D Arachis hypogaea HOM05D004165 ORTHO05D005063 1.0e-26 122.9 70 88.6
arahy.Tifrunner.gnm1.ann1.KAY7L7 Arachis hypogaea HOM05D004165 ORTHO05D005063 1.0e-26 122.9 70 88.6
Glyma.05G185300 Glycine max HOM05D004165 ORTHO05D005063 1.0e-26 122.9 70 90.0
Lalb_Chr13g0296271 Lupinus albus HOM05D004165 ORTHO05D005063 1.0e-26 122.9 70 90.0
Phvul.002G266300 Phaseolus vulgaris HOM05D004165 ORTHO05D005063 1.3e-26 122.5 70 90.0
Cfa002775 Carpinus fangiana HOM05D004165 ORTHO05D005063 2.2e-26 121.7 70 87.1
Glyma.08G143200 Glycine max HOM05D004165 ORTHO05D005063 2.9e-26 121.3 70 90.0
Haze_25067 Corylus avellana HOM05D004165 ORTHO05D005063 5.0e-26 120.6 70 85.7
Gohir.A12G083100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 1.4e-25 119.0 69 87.0
Gohir.D12G093100 Gossypium hirsutum HOM05D004165 ORTHO05D005063 1.4e-25 119.0 69 87.0
Duzib147G0774 Durio zibethinus HOM05D004165 ORTHO05D005063 1.9e-25 118.6 69 87.0
Gorai.008G100800 Gossypium raimondii HOM05D004165 ORTHO05D005063 1.9e-25 118.6 69 85.5
Thecc.01G115900 Theobroma cacao HOM05D004165 ORTHO05D005063 9.4e-25 116.3 69 87.0
CiPaw.03G132500 Carya illinoinensis HOM05D004165 ORTHO05D005063 1.2e-24 115.9 70 84.3
CANSAT01G1143 Cannabis sativa HOM05D004165 ORTHO05D005063 2.7e-24 114.8 70 82.9
Prupe.6G168600 Prunus persica HOM05D004165 ORTHO05D005063 2.7e-24 114.8 70 84.3
Lj4C863G6 Lonicera japonica HOM05D004165 ORTHO05D005063 4.7e-24 114.0 70 81.4
QL06p031619 Quercus lobata HOM05D004165 ORTHO05D005063 4.7e-24 114.0 70 84.3
PSO170G0015 Papaver somniferum HOM05D004165 ORTHO05D005063 6.1e-24 113.6 70 81.4
PSO210G1143 Papaver somniferum HOM05D004165 ORTHO05D005063 6.1e-24 113.6 70 81.4
GSVIVG01022255001 Vitis vinifera HOM05D004165 ORTHO05D005063 1.0e-23 112.8 70 85.7
CSS0013219 Camellia sinensis var. sinensis HOM05D004165 ORTHO05D005063 1.4e-23 112.5 70 82.9
Cc07_g16560 Coffea canephora HOM05D004165 ORTHO05D005063 1.4e-23 112.5 70 81.4
Cpa.g.sc72.11 Carica papaya HOM05D004165 ORTHO05D005063 3.0e-23 111.3 70 78.6
TAR628G1404 Trochodendron aralioides HOM05D004165 ORTHO05D005063 3.9e-23 110.9 70 81.4
Hma1.2p1_0134F.1_g061540 Hydrangea macrophylla HOM05D004165 ORTHO05D005063 5.1e-23 110.5 74 78.4
Rhsim10G0147800 Rhododendron simsii HOM05D004165 ORTHO05D005063 8.8e-23 109.8 70 81.4
Sabra05G0071000 Salix brachista HOM05D004165 ORTHO05D005063 1.1e-22 109.4 70 78.6
MD15G1330600 Malus domestica HOM05D004165 ORTHO05D005063 1.5e-22 109.0 70 78.6
vmacro12886 Vaccinium macrocarpon HOM05D004165 ORTHO05D005063 2.0e-22 108.6 70 80.0
FvH4_1g23050 Fragaria vesca HOM05D004165 ORTHO05D005063 2.6e-22 108.2 70 78.6
FAN19G2841 Fragaria x ananassa HOM05D004165 ORTHO05D005063 2.6e-22 108.2 70 78.6
FAN23G0468 Fragaria x ananassa HOM05D004165 ORTHO05D005063 2.6e-22 108.2 70 78.6
FAN26G2965 Fragaria x ananassa HOM05D004165 ORTHO05D005063 2.6e-22 108.2 70 78.6
FAN28G2110 Fragaria x ananassa HOM05D004165 ORTHO05D005063 2.6e-22 108.2 70 78.6
Potri.005G086100 Populus trichocarpa HOM05D004165 ORTHO05D005063 3.3e-22 107.8 70 77.1
Potri.007G078650 Populus trichocarpa HOM05D004165 ORTHO05D005063 5.7e-22 107.1 70 77.1
RcHm_v2.0_Chr2g0117761 Rosa chinensis HOM05D004165 ORTHO05D005063 9.7e-22 106.3 70 78.6
ECA233G2130 Erigeron canadensis HOM05D004165 ORTHO05D005063 1.3e-21 105.9 70 74.3
Peaxi162Scf00702g00610 Petunia axillaris HOM05D004165 ORTHO05D005063 1.3e-21 105.9 70 77.1
Actinidia28449 Actinidia chinensis HOM05D004165 ORTHO05D005063 2.2e-21 105.1 70 78.6
Manes.12G144600 Manihot esculenta HOM05D004165 ORTHO05D005063 2.2e-21 105.1 70 75.7
PGR004G2408 Punica granatum HOM05D004165 ORTHO05D005063 2.8e-21 104.8 70 78.6
Eucgr.I00310 Eucalyptus grandis HOM05D004165 ORTHO05D005063 3.7e-21 104.4 70 74.3
Nn5g28841 Nelumbo nucifera HOM05D004165 ORTHO05D005063 3.7e-21 104.4 70 77.1
THA.LOC104804480 Tarenaya hassleriana HOM05D004165 ORTHO05D005063 4.8e-21 104.0 70 74.3
AL7G11450 Arabidopsis lyrata HOM05D004165 ORTHO05D005063 8.2e-21 103.2 70 74.3
Sc03g0004750 Simmondsia chinensis HOM05D004165 ORTHO05D005063 8.2e-21 103.2 69 78.3
Aqoxy5G02023 Aquilegia oxysepala HOM05D004165 ORTHO05D005063 1.4e-20 102.4 70 72.9
CDE07G1357 Ceratophyllum demersum HOM05D004165 ORTHO05D005063 1.4e-20 102.4 70 74.3
Carub.0007s0134 Capsella rubella HOM05D004165 ORTHO05D005063 1.8e-20 102.1 70 74.3
Nitab4.5_0009050g0020 Nicotiana tabacum HOM05D004165 ORTHO05D005063 1.8e-20 102.1 70 77.1
A01p00380 Brassica napus HOM05D004165 ORTHO05D005063 2.4e-20 101.7 69 73.9
BraA01t00046Z Brassica rapa HOM05D004165 ORTHO05D005063 2.4e-20 101.7 69 73.9
Sp7g36440 Schrenkiella parvula HOM05D004165 ORTHO05D005063 2.4e-20 101.7 70 74.3
Nitab4.5_0000184g0120 Nicotiana tabacum HOM05D004165 ORTHO05D005063 4.1e-20 100.9 70 75.7
MSTRG.23305 Avicennia marina HOM05D004165 ORTHO05D005063 6.9e-20 100.1 70 74.3
Oeu054941.1 Olea europaea HOM05D004165 ORTHO05D005063 6.9e-20 100.1 70 72.9
Thhalv10024179m.g Eutrema salsugineum HOM05D004165 ORTHO05D005063 9.1e-20 99.8 69 72.5
Solyc04g051570.4 Solanum lycopersicum HOM05D004165 ORTHO05D005063 9.1e-20 99.8 70 74.3
Sopen04g022920 Solanum pennellii HOM05D004165 ORTHO05D005063 9.1e-20 99.8 70 74.3
C01p00530 Brassica napus HOM05D004165 ORTHO05D005063 1.5e-19 99.0 69 72.5
BolC1t00056H Brassica oleracea HOM05D004165 ORTHO05D005063 1.5e-19 99.0 69 72.5
Aa31LG6G15850 Aethionema arabicum HOM05D004165 ORTHO05D005063 2.0e-19 98.6 70 72.9
AT4G39420 Arabidopsis thaliana HOM05D004165 ORTHO05D005063 2.0e-19 98.6 70 71.4
CARHR247290 Cardamine hirsuta HOM05D004165 ORTHO05D005063 4.5e-19 97.4 70 70.0
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 5.9e-19 97.1 68 69.1
SalBow6G1439 Salvia bowleyana HOM05D004165 ORTHO05D005063 1.0e-18 96.3 70 71.4
Migut.H02450 Erythranthe guttata HOM05D004165 ORTHO05D005063 2.2e-18 95.1 70 68.6
ClCG01G015940 Citrullus lanatus HOM05D004165 ORTHO05D005063 6.5e-18 93.6 70 67.1
MELO3C007461.2 Cucumis melo HOM05D004165 ORTHO05D005063 6.5e-18 93.6 70 67.1
SGA_v2.0_scaffold2G01283 Striga asiatica HOM05D004165 ORTHO05D005063 1.4e-17 92.4 70 67.1
CsaV3_6G042210 Cucumis sativus L. HOM05D004165 ORTHO05D005063 1.9e-17 92.0 70 65.7
DCAR_016674 Daucus carota HOM05D004165 ORTHO05D005063 1.9e-17 92.0 69 69.6
Lsat_1_v5_gn_9_57180 Lactuca sativa HOM05D004165 ORTHO05D005063 4.2e-17 90.9 70 67.1
SEGI_01323 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 1.4e-15 85.9 69 65.2
SEGI_35182 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 1.4e-15 85.9 69 65.2
Sed0015867 Sechium edule HOM05D004165 ORTHO05D005063 1.8e-15 85.5 70 64.3
HPP92_013327 Vanilla planifolia HOM05D004165 ORTHO05D005063 1.8e-15 85.5 70 67.1
HPP92_013330 Vanilla planifolia HOM05D004165 ORTHO05D005063 1.8e-15 85.5 70 67.1
HanXRQChr08g0218061 Helianthus annuus HOM05D004165 ORTHO05D005063 3.9e-15 84.3 70 67.1
EL10Ac6g15255 Beta vulgaris HOM05D004165 ORTHO05D005063 8.8e-15 83.2 70 65.7
SHI11791 Sapria himalayana HOM05D004165 ORTHO05D005063 4.4e-14 80.9 70 61.4
SEGI_28584 Sequoiadendron giganteum HOM05D004165 ORTHO05D005063 4.4e-14 80.9 69 60.9
Zm00001eb062420 Zea mays HOM05D004165 ORTHO05D005063 9.7e-14 79.7 69 60.9
unitig_899.g14615 Utricularia gibba HOM05D004165 ORTHO05D005063 2.2e-13 78.6 70 60.0
SMO116G0345 Selaginella moellendorffii HOM05D004165 ORTHO05D005063 2.4e-12 75.1 69 59.4
AUR62003622 Chenopodium quinoa HOM05D004165 ORTHO05D005063 3.1e-12 74.7 70 62.9
AUR62017931 Chenopodium quinoa HOM05D004165 ORTHO05D005063 3.1e-12 74.7 70 62.9
Pp3c10_13600 Physcomitrium patens HOM05D004165 ORTHO05D005063 4.5e-11 70.9 69 52.2
Pp3c3_30110 Physcomitrium patens HOM05D004165 ORTHO05D005063 1.3e-10 69.3 69 50.7
Mapoly0066s0021 Marchantia polymorpha HOM05D004165 ORTHO05D005063 1.9e-09 65.5 70 50.0
Pp3c7_14700 Physcomitrium patens HOM05D004165 ORTHO05D005063 1.6e-08 62.4 69 47.8


User provided reference genes

Program Settings