Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 3.4e-76 288.5 175 100.0
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 5.5e-66 254.6 175 81.7
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 5.5e-66 254.6 175 80.0
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 1.4e-61 240.0 175 74.3
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.7e-54 216.5 175 78.3
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 8.3e-54 214.2 175 71.4
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 1.1e-53 213.8 175 68.6
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 3.5e-52 208.8 179 65.9
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 8.5e-51 204.1 176 68.2
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 7.2e-50 201.1 177 64.4
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 9.4e-50 200.7 176 68.8
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 9.4e-50 200.7 176 68.8
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 9.4e-50 200.7 179 74.9
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.2e-49 200.3 180 64.4
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.6e-49 199.9 175 66.9
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.6e-49 199.9 176 63.6
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 1.6e-49 199.9 176 63.6
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.6e-49 199.9 176 73.3
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 2.1e-49 199.5 178 62.4
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 2.7e-49 199.1 179 65.9
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.7e-49 199.1 178 63.5
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 3.6e-49 198.7 175 65.1
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 3.6e-49 198.7 184 65.2
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 4.7e-49 198.4 175 68.0
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 4.7e-49 198.4 177 63.3
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 4.7e-49 198.4 176 63.1
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.0e-48 197.2 177 65.0
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.0e-48 197.2 177 65.0
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.0e-48 197.2 177 67.8
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 1.8e-48 196.4 175 64.0
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 1.8e-48 196.4 177 66.1
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.8e-48 196.4 181 62.4
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.8e-48 196.4 175 70.3
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 1.8e-48 196.4 177 64.4
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 2.3e-48 196.1 176 64.2
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 2.3e-48 196.1 176 71.0
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.0e-48 195.7 177 67.2
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 5.2e-48 194.9 177 64.4
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 5.2e-48 194.9 177 64.4
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.2e-48 194.9 177 64.4
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 5.2e-48 194.9 175 62.9
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 5.2e-48 194.9 181 62.4
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 5.2e-48 194.9 177 62.1
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 1.2e-47 193.7 182 69.8
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.2e-47 193.7 177 61.6
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 2.0e-47 193.0 176 65.3
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 3.4e-47 192.2 176 62.5
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 3.4e-47 192.2 177 68.9
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.7e-47 191.4 173 68.2
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 7.5e-47 191.0 176 61.9
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 9.8e-47 190.7 175 60.6
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 1.7e-46 189.9 175 60.6
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 2.8e-46 189.1 176 61.4
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 3.7e-46 188.7 179 63.7
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 4.9e-46 188.3 180 68.3
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 8.3e-46 187.6 180 62.8
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 8.3e-46 187.6 176 60.8
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.4e-45 186.8 175 72.0
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.8e-45 186.4 176 63.6
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.1e-45 185.7 176 59.1
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 5.4e-45 184.9 185 59.5
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 7.0e-45 184.5 179 62.6
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 9.1e-45 184.1 177 66.7
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 9.1e-45 184.1 175 67.4
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 1.2e-44 183.7 175 68.6
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.6e-44 183.3 180 61.7
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.6e-44 183.3 177 63.3
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 3.5e-44 182.2 178 62.4
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 4.5e-44 181.8 175 68.0
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.7e-43 179.9 171 62.0
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 2.3e-43 179.5 176 59.7
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.3e-43 179.5 176 64.8
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.9e-43 179.1 176 64.8
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 2.9e-43 179.1 177 65.5
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 2.9e-43 179.1 175 67.4
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 3.8e-43 178.7 178 59.0
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 8.6e-43 177.6 162 64.8
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 8.6e-43 177.6 181 61.9
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 1.1e-42 177.2 181 58.0
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 1.5e-42 176.8 136 69.1
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.5e-42 176.8 181 59.1
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.9e-42 176.4 107 82.2
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 3.3e-42 175.6 179 60.9
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 3.3e-42 175.6 179 59.2
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 3.3e-42 175.6 179 59.2
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 4.2e-42 175.3 130 70.8
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 4.2e-42 175.3 183 61.2
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 4.2e-42 175.3 142 66.2
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 5.6e-42 174.9 132 69.7
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 7.2e-42 174.5 178 63.5
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 7.2e-42 174.5 112 77.7
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 9.5e-42 174.1 180 61.1
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 9.5e-42 174.1 182 60.4
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.6e-41 173.3 178 57.3
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.6e-41 173.3 174 59.2
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 3.6e-41 172.2 189 55.6
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 4.7e-41 171.8 179 57.5
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 4.7e-41 171.8 179 57.5
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 6.1e-41 171.4 173 58.4
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.0e-40 170.6 110 78.2
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.4e-40 170.2 128 69.5
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.8e-40 169.9 103 82.5
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 2.3e-40 169.5 180 57.2
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 2.3e-40 169.5 176 60.2
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 3.0e-40 169.1 176 58.0
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 3.0e-40 169.1 132 69.7
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 5.2e-40 168.3 136 66.9
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 6.8e-40 167.9 178 57.9
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.6e-39 166.0 133 67.7
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 4.4e-39 165.2 176 60.2
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 7.5e-39 164.5 171 64.3
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 8.3e-38 161.0 110 74.5
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 1.8e-37 159.8 180 56.7
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 5.4e-37 158.3 85 94.1
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.2e-36 157.1 164 57.9
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 9.5e-34 147.5 114 64.0
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 5.8e-31 138.3 134 55.2
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 3.7e-30 135.6 139 61.2
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 8.3e-30 134.4 132 53.8
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 1.6e-28 130.2 133 52.6
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.3e-27 127.1 99 64.6
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 2.3e-27 126.3 124 53.2
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 8.9e-24 114.4 120 51.7
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 1.9e-21 106.7 131 51.9
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 6.6e-19 98.2 139 41.7
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 1.5e-18 97.1 116 44.8
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 4.7e-17 92.0 92 58.7
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 4.4e-15 85.5 170 52.4


User provided reference genes

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