Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35467 Trifolium pratense HOM05D014115 ORTHO05D004704 2.7e-145 518.8 305 100.0
Medtr3g058930 Medicago truncatula HOM05D014115 ORTHO05D004704 3.4e-63 246.1 314 56.1
Psat5g169040 Pisum sativum HOM05D014115 ORTHO05D004704 1.0e-38 164.9 307 45.6
Lj6g0007370 Lotus japonicus HOM05D005849 ORTHO05D004704 2.2e-33 147.1 314 45.5
Glyma.18G077800 Glycine max HOM05D014115 ORTHO05D004704 1.2e-23 114.8 315 38.1
Phvul.006G056700 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 4.5e-23 112.8 301 35.9
Glyma.08G329000 Glycine max HOM05D005849 ORTHO05D004704 1.3e-22 111.3 314 38.2
Ca_22134_v3 Cicer arietinum L. HOM05D014115 ORTHO05D004704 1.7e-22 110.9 313 35.8
VMungo0540G1302 Vigna mungo HOM05D005849 ORTHO05D004704 1.9e-21 107.5 314 34.7
Glyma.02G300100 Glycine max HOM05D014115 ORTHO05D004704 8.8e-19 98.6 314 33.8
VMungo0647G1046 Vigna mungo HOM05D014115 ORTHO05D004704 7.0e-16 89.0 260 34.2
Glyma.14G013800 Glycine max HOM05D014115 ORTHO05D004704 7.7e-15 85.5 308 31.5
Medtr5g095710 Medicago truncatula HOM05D014115 ORTHO05D004704 2.9e-14 83.6 301 36.2
TPR.G8608 Trifolium pratense HOM05D014115 ORTHO05D015996 5.5e-13 79.3 250 37.6
Phvul.008G278800 Phaseolus vulgaris HOM05D014115 ORTHO05D004704 7.2e-13 79.0 311 30.9
Lalb_Chr15g0082031 Lupinus albus HOM05D005849 ORTHO05D004704 8.8e-11 72.0 218 35.8
QL08p004345 Quercus lobata HOM05D005849 ORTHO05D004704 2.2e-09 67.4 274 30.3
QL11p054311 Quercus lobata HOM05D005849 ORTHO05D004704 2.2e-09 67.4 274 30.3
CiPaw.12G137700 Carya illinoinensis HOM05D005849 ORTHO05D004704 6.3e-09 65.9 295 28.8
Haze_09816 Corylus avellana HOM05D005849 ORTHO05D004704 1.2e-07 61.6 162 34.0
Duzib138G1177 Durio zibethinus HOM05D005849 ORTHO05D004704 1.2e-07 61.6 68 55.9
CiPaw.11G203200 Carya illinoinensis HOM05D005849 ORTHO05D004704 2.7e-07 60.5 113 38.1
Thecc.01G196200 Theobroma cacao HOM05D005849 ORTHO05D004704 7.7e-07 58.9 67 53.7
Duzib133G0645 Durio zibethinus HOM05D005849 ORTHO05D004704 3.8e-06 56.6 68 52.9
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 3.8e-06 56.6 67 55.2
Dinv10326 Davidia involucrata HOM05D005849 ORTHO05D004704 5.0e-06 56.2 66 53.0


User provided reference genes

Program Settings