Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35414 Trifolium pratense HOM05D011582 ORTHO05D010299 1.5e-55 219.5 134 100.0
Medtr4g084970 Medicago truncatula HOM05D011582 ORTHO05D010299 3.0e-27 125.6 130 76.2
Ca_18727_v3 Cicer arietinum L. HOM05D011582 ORTHO05D010299 5.0e-27 124.8 129 75.2
Psat7g129520 Pisum sativum HOM05D011582 ORTHO05D010299 9.5e-26 120.6 139 63.3
Glyma.07G216800 Glycine max HOM05D011582 ORTHO05D010299 2.1e-20 102.8 138 66.7
Glyma.20G013700 Glycine max HOM05D011582 ORTHO05D010299 1.1e-18 97.1 137 64.2
Phvul.002G093100 Phaseolus vulgaris HOM05D011582 ORTHO05D010299 4.3e-18 95.1 137 61.3
VMungo0251G2113 Vigna mungo HOM05D011582 ORTHO05D010299 2.8e-17 92.4 137 60.6
Lj4g0017408 Lotus japonicus HOM05D011582 ORTHO05D010299 4.7e-17 91.7 128 63.3
Glyma.07G165300 Glycine max HOM05D011582 ORTHO05D010299 6.8e-16 87.8 153 52.3
Lalb_Chr05g0219431 Lupinus albus HOM05D011582 ORTHO05D010299 6.8e-16 87.8 138 55.8
Lalb_Chr04g0258631 Lupinus albus HOM05D011582 ORTHO05D010299 9.2e-13 77.4 134 49.3
CSS0046736 Camellia sinensis var. sinensis HOM05D009257 ORTHO05D010622 3.0e-11 72.4 124 50.0
Duzib251G0093 Durio zibethinus HOM05D009257 ORTHO05D010299 1.5e-10 70.1 135 48.9
Lalb_Chr10g0096201 Lupinus albus HOM05D011582 ORTHO05D010299 2.5e-10 69.3 145 44.8
Duzib268G0344 Durio zibethinus HOM05D009257 ORTHO05D010299 4.3e-10 68.6 127 52.8
Gohir.A03G121900 Gossypium hirsutum HOM05D009257 ORTHO05D010299 1.2e-09 67.0 138 44.9
Gohir.D02G144800 Gossypium hirsutum HOM05D009257 ORTHO05D010299 2.1e-09 66.2 138 44.9
Gorai.005G162200 Gossypium raimondii HOM05D009257 ORTHO05D010299 4.7e-09 65.1 138 47.8
Aqoxy3G03825 Aquilegia oxysepala HOM05D009257 ORTHO05D010622 5.2e-08 61.6 125 42.4
Duzib248G0803 Durio zibethinus HOM05D009257 ORTHO05D010299 6.8e-08 61.2 132 47.7
Gohir.D01G145300 Gossypium hirsutum HOM05D009257 ORTHO05D010299 6.8e-08 61.2 148 48.6
Thecc.02G281400 Theobroma cacao HOM05D009257 ORTHO05D010299 8.9e-08 60.8 128 46.1
Gorai.002G179300 Gossypium raimondii HOM05D009257 ORTHO05D010299 1.2e-07 60.5 148 48.6
TWI75G1765 Tripterygium wilfordii HOM05D009257 ORTHO05D010622 1.5e-07 60.1 125 52.8
TAR630G0006 Trochodendron aralioides HOM05D009257 ORTHO05D010622 1.5e-07 60.1 106 52.8
DCAR_026775 Daucus carota HOM05D009525 ORTHO05D010622 2.6e-07 59.3 128 50.0
DCAR_023605 Daucus carota HOM05D009525 ORTHO05D010622 5.8e-07 58.2 107 40.2
Potri.010G113300 Populus trichocarpa HOM05D009257 ORTHO05D010622 7.6e-07 57.8 107 54.2
Haze_11006 Corylus avellana HOM05D012022 ORTHO05D013822 1.7e-06 56.6 98 54.1
TWI31G1011 Tripterygium wilfordii HOM05D009257 ORTHO05D010622 1.7e-06 56.6 139 47.5
Dinv07644 Davidia involucrata HOM05D009257 ORTHO05D010622 2.2e-06 56.2 125 54.4
Phvul.003G023700 Phaseolus vulgaris HOM05D011582 ORTHO05D010299 3.8e-06 55.5 161 40.4
Manes.15G127400 Manihot esculenta HOM05D009257 ORTHO05D010622 6.4e-06 54.7 101 55.4
Nitab4.5_0002523g0010 Nicotiana tabacum HOM05D009525 ORTHO05D010622 6.4e-06 54.7 135 42.2
RcHm_v2.0_Chr4g0441241 Rosa chinensis HOM05D012022 ORTHO05D013822 8.4e-06 54.3 54 53.7


User provided reference genes

Program Settings