Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35334 Trifolium pratense HOM05D008537 ORTHO05D010652 8.8e-75 283.5 139 100.0
Gorai.001G167800 Gossypium raimondii HOM05D008537 ORTHO05D010652 8.0e-68 260.4 130 98.5
SabraMtG0006100 Salix brachista HOM05D008537 ORTHO05D010652 1.6e-60 236.1 117 95.7
CsaV3_UNG209980 Cucumis sativus L. HOM05D008537 ORTHO05D010652 2.1e-60 235.7 118 95.8
CARHR287170 Cardamine hirsuta HOM05D008537 ORTHO05D010652 1.2e-58 229.9 117 99.1
Ca_27707_v3 Cicer arietinum L. HOM05D008537 ORTHO05D010652 1.2e-58 229.9 113 96.5
RcHm_v2.0_MTg0499151 Rosa chinensis HOM05D008537 ORTHO05D010652 1.5e-58 229.6 114 96.5
arahy.Tifrunner.gnm1.ann1.DJ3Y2L Arachis hypogaea HOM05D008537 ORTHO05D010652 2.6e-58 228.8 109 100.0
arahy.Tifrunner.gnm1.ann1.PZS5LY Arachis hypogaea HOM05D008537 ORTHO05D010652 2.6e-58 228.8 109 100.0
Solyc00g500256.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 5.7e-58 227.6 115 94.8
Solyc00g500112.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 2.8e-57 225.3 115 94.8
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 8.3e-57 223.8 109 98.2
Ah.10g028020 Amaranthus hybridus HOM05D008537 ORTHO05D010652 1.1e-56 223.4 114 94.7
arahy.Tifrunner.gnm1.ann1.75TDV4 Arachis hypogaea HOM05D008537 ORTHO05D010652 9.1e-56 220.3 109 95.4
Lalb_Chr00c51g0413211 Lupinus albus HOM05D008537 ORTHO05D010652 1.2e-55 219.9 113 98.2
Actinidia34884 Actinidia chinensis HOM05D008537 ORTHO05D010652 1.7e-54 216.1 113 92.0
SEGI_04170 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 1.9e-53 212.6 129 83.7
SEGI_18574 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 1.9e-53 212.6 129 83.7
SEGI_08781 Sequoiadendron giganteum HOM05D008537 ORTHO05D010652 2.8e-52 208.8 129 82.2
CDE02G3137 Ceratophyllum demersum HOM05D008537 ORTHO05D010652 8.0e-52 207.2 135 80.7
BolSC28t60361H Brassica oleracea HOM05D008537 ORTHO05D010652 1.3e-49 199.9 122 86.9
BraSC177t45759Z Brassica rapa HOM05D008537 ORTHO05D010652 1.3e-49 199.9 122 86.9
BraSC48t46348Z Brassica rapa HOM05D008537 ORTHO05D010652 1.3e-49 199.9 122 86.9
LjContig00439g0010598 Lotus japonicus HOM05D008537 ORTHO05D010652 1.8e-48 196.1 125 84.0
LjContig00446g0012519 Lotus japonicus HOM05D008537 ORTHO05D010652 1.8e-48 196.1 125 84.0
Aa31csc464G100 Aethionema arabicum HOM05D008537 ORTHO05D010652 2.5e-45 185.7 98 91.8
Glyma.17G185800 Glycine max HOM05D008537 ORTHO05D010652 7.3e-45 184.1 122 82.0
Solyc11g030915.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 3.6e-36 155.2 95 81.1
C01p34740 Brassica napus HOM05D008537 ORTHO05D010652 1.3e-33 146.7 104 74.0
EL10Ac5g12180 Beta vulgaris HOM05D008537 ORTHO05D010652 3.4e-26 122.1 115 59.1
Mapoly3683s0001 Marchantia polymorpha HOM05D008537 ORTHO05D010652 5.1e-22 108.2 78 69.2
ATR1126G003 Amborella trichopoda HOM05D008537 ORTHO05D010652 1.6e-15 86.7 47 91.5
SHI26665 Sapria himalayana HOM05D008537 ORTHO05D010652 7.3e-13 77.8 97 51.5
TAR022G0005 Trochodendron aralioides HOM05D001750 ORTHO05D001825 7.3e-13 77.8 114 35.1
Haze_27121 Corylus avellana HOM05D001750 ORTHO05D001825 5.3e-11 71.6 123 27.6
SMO053G0013 Selaginella moellendorffii HOM05D001750 ORTHO05D001825 4.9e-09 65.1 117 41.9
SHI04797 Sapria himalayana HOM05D008537 ORTHO05D010652 8.4e-09 64.3 122 36.9
Solyc10g045727.1 Solanum lycopersicum HOM05D008537 ORTHO05D010652 2.7e-07 59.3 39 74.4
Nitab4.5_0003632g0010 Nicotiana tabacum HOM05D008537 ORTHO05D010652 5.1e-06 55.1 26 96.2
Peaxi162Scf00622g00018 Petunia axillaris HOM05D008537 ORTHO05D010652 5.1e-06 55.1 34 82.4


User provided reference genes

Program Settings