Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35309 Trifolium pratense HOM05D007848 ORTHO05D000174 2.2e-35 151.8 76 100.0
TPR.G5743 Trifolium pratense HOM05D000096 ORTHO05D000045 1.8e-21 105.5 50 100.0
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 7.1e-18 93.6 74 63.5
Medtr5g032920 Medicago truncatula HOM05D007848 ORTHO05D000174 2.1e-14 82.0 74 58.1
Medtr1g036740 Medicago truncatula HOM05D007848 ORTHO05D000174 6.8e-13 77.0 74 50.0
Medtr8g096680 Medicago truncatula HOM05D007848 ORTHO05D000174 6.8e-13 77.0 74 50.0
Medtr8g463820 Medicago truncatula HOM05D007848 ORTHO05D000174 6.8e-13 77.0 74 50.0
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.2e-12 76.3 68 48.5
Medtr1g094230 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-12 75.1 74 48.6
Medtr3g078440 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-12 75.1 74 48.6
Medtr4g471610 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-12 75.1 74 48.6
Medtr6g039240 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-12 75.1 74 48.6
Medtr8g036090 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-12 75.1 74 48.6
Medtr1788s0010 Medicago truncatula HOM05D007848 ORTHO05D000174 5.8e-12 73.9 74 48.6
Medtr3g032190 Medicago truncatula HOM05D007848 ORTHO05D000174 5.8e-12 73.9 74 47.3
Medtr5g060920 Medicago truncatula HOM05D007848 ORTHO05D000174 5.8e-12 73.9 74 47.3
Medtr3g095950 Medicago truncatula HOM05D007848 ORTHO05D000174 7.6e-12 73.6 74 47.3
Medtr7g093810 Medicago truncatula HOM05D007848 ORTHO05D000174 7.6e-12 73.6 74 47.3
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 9.9e-12 73.2 74 47.3
Medtr6g039230 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-11 72.8 74 47.3
Medtr3g116750 Medicago truncatula HOM05D007848 ORTHO05D000174 2.2e-11 72.0 74 45.9
Medtr7g089660 Medicago truncatula HOM05D007848 ORTHO05D000174 2.9e-11 71.6 74 45.9
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.9e-11 71.6 69 47.8
Medtr2g032570 Medicago truncatula HOM05D007848 ORTHO05D000174 4.9e-11 70.9 74 45.9
Medtr5g055160 Medicago truncatula HOM05D007848 ORTHO05D000174 4.9e-11 70.9 74 45.9
Medtr6g013350 Medicago truncatula HOM05D007848 ORTHO05D000174 4.9e-11 70.9 47 63.8
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.1e-10 69.7 67 47.8
Medtr7g117425 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-10 69.3 74 44.6
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 9.2e-10 66.6 74 45.9
Lj2g0011029 Lotus japonicus HOM05D000353 ORTHO05D000174 1.6e-09 65.9 74 37.8
Lj5g0006790 Lotus japonicus HOM05D007848 ORTHO05D000174 1.6e-09 65.9 74 37.8
Medtr5g085220 Medicago truncatula HOM05D007848 ORTHO05D000174 1.6e-09 65.9 74 43.2
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 1.7e-08 62.4 70 42.9
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 2.3e-08 62.0 28 96.4
Medtr6g013455 Medicago truncatula HOM05D007848 ORTHO05D000174 3.0e-08 61.6 74 39.2
Medtr7g104000 Medicago truncatula HOM05D007848 ORTHO05D000174 3.0e-08 61.6 74 39.2
Lj5g0019698 Lotus japonicus HOM05D007848 ORTHO05D000174 3.9e-08 61.2 74 43.2
Nitab4.5_0000534g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.1e-08 60.8 74 40.5
Medtr3g056240 Medicago truncatula HOM05D000353 ORTHO05D000174 6.6e-08 60.5 74 43.2
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 6.6e-08 60.5 74 43.2
Lj1g0016660 Lotus japonicus HOM05D012880 ORTHO05D010133 8.7e-08 60.1 75 34.7
Lj4g0012922 Lotus japonicus HOM05D007848 ORTHO05D000174 8.7e-08 60.1 74 43.2
Medtr5g056060 Medicago truncatula HOM05D007848 ORTHO05D000174 1.5e-07 59.3 74 37.8
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 4.3e-07 57.8 68 41.2
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 4.3e-07 57.8 68 41.2
Glyma.05G083400 Glycine max HOM05D000353 ORTHO05D000174 5.6e-07 57.4 59 49.2
Medtr3g463070 Medicago truncatula HOM05D007848 ORTHO05D000174 7.3e-07 57.0 49 46.9
Medtr2g054710 Medicago truncatula HOM05D000353 ORTHO05D000174 9.6e-07 56.6 68 41.2
Nitab4.5_0006891g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.6e-07 56.6 73 42.5
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 9.6e-07 56.6 54 42.6
Medtr5g068430 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-06 56.2 49 44.9
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-06 54.7 74 36.5
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-06 54.7 74 36.5
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-06 54.7 74 36.5
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-06 54.7 74 36.5
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 3.6e-06 54.7 74 36.5
Glyma.01G094700 Glycine max HOM05D007848 ORTHO05D000174 3.6e-06 54.7 51 49.0
PGSC0003DMG400005509 Solanum tuberosum HOM05D011943 ORTHO05D015721 3.6e-06 54.7 50 50.0
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 4.7e-06 54.3 74 36.5
Medtr5g070620 Medicago truncatula HOM05D000353 ORTHO05D008317 4.7e-06 54.3 69 42.0
Glyma.07G124150 Glycine max HOM05D007848 ORTHO05D000174 8.1e-06 53.5 60 46.7
Nitab4.5_0000999g0080 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.1e-06 53.5 73 38.4


User provided reference genes

Program Settings