Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 5.4e-116 421.0 213 100.0
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 2.4e-92 342.4 214 82.7
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 2.7e-91 339.0 213 81.2
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 4.1e-71 271.9 219 65.8
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 2.2e-69 266.2 219 65.3
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 9.4e-68 260.8 218 62.4
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 2.7e-67 259.2 219 64.4
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 3.6e-67 258.8 217 65.4
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 3.7e-64 248.8 145 82.8
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 3.1e-63 245.7 218 61.9
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 5.0e-61 238.4 216 59.7
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 4.2e-60 235.3 216 59.7
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 4.2e-60 235.3 186 61.8
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 4.7e-59 231.9 221 57.0
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 6.1e-59 231.5 209 57.9
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 1.0e-58 230.7 217 57.6
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 2.6e-57 226.1 216 57.9
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 1.7e-56 223.4 219 56.6
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 2.2e-56 223.0 222 55.0
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 3.7e-56 222.2 190 55.8
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 4.8e-56 221.9 171 60.2
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 8.2e-56 221.1 211 55.9
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 1.1e-55 220.7 190 55.8
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 1.4e-55 220.3 216 52.3
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 4.1e-55 218.8 215 55.3
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 5.3e-55 218.4 190 55.3
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 5.3e-55 218.4 190 55.3
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 5.3e-55 218.4 190 55.3
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 9.1e-55 217.6 215 53.0
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 2.0e-54 216.5 223 55.2
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 2.0e-54 216.5 220 53.2
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 2.0e-54 216.5 218 53.7
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 3.5e-54 215.7 215 54.9
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 1.3e-53 213.8 183 54.1
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 2.2e-53 213.0 191 59.2
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 2.2e-53 213.0 213 54.5
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 2.9e-53 212.6 215 54.9
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 5.0e-53 211.8 218 53.2
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 5.0e-53 211.8 216 56.5
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 5.0e-53 211.8 218 52.3
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 8.5e-53 211.1 183 53.6
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 8.5e-53 211.1 178 54.5
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 2.5e-52 209.5 190 53.2
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 7.2e-52 208.0 191 55.0
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 7.2e-52 208.0 217 50.7
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 9.4e-52 207.6 216 54.6
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.2e-51 207.2 218 52.8
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 1.6e-51 206.8 209 53.1
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.1e-51 206.5 218 52.3
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 1.4e-50 203.8 222 52.3
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 1.8e-50 203.4 169 55.6
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.8e-50 203.4 238 50.0
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 1.8e-50 203.4 226 50.0
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 3.0e-50 202.6 191 52.4
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 3.0e-50 202.6 169 58.0
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 5.2e-50 201.8 169 54.4
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 3.3e-49 199.1 207 48.3
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 3.3e-49 199.1 213 47.9
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 4.4e-49 198.7 188 50.0
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 1.3e-48 197.2 182 54.4
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 1.3e-48 197.2 214 50.0
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 1.7e-48 196.8 172 55.8
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 2.2e-48 196.4 175 54.9
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 2.2e-48 196.4 182 54.9
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 2.8e-48 196.1 213 47.9
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 4.8e-48 195.3 227 48.0
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 3.5e-46 189.1 223 52.5
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 4.5e-46 188.7 197 51.3
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 4.5e-46 188.7 208 49.0
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 4.5e-46 188.7 208 49.5
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 1.3e-45 187.2 127 63.0
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 2.2e-45 186.4 175 53.1
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 5.0e-45 185.3 223 46.6
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 1.9e-44 183.3 180 51.7
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 3.2e-44 182.6 214 48.6
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 3.2e-44 182.6 214 49.5
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 2.1e-43 179.9 229 44.5
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 3.6e-43 179.1 221 41.6
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 3.0e-42 176.0 190 52.6
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 4.0e-42 175.6 188 48.9
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 6.8e-42 174.9 197 45.7
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 5.7e-41 171.8 297 36.7
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 8.3e-40 167.9 157 52.2
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 1.1e-39 167.5 190 49.5
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 1.0e-37 161.0 143 52.4
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 1.3e-37 160.6 179 45.3
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.7e-37 160.2 231 43.3
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 2.2e-37 159.8 143 53.1
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 5.0e-37 158.7 156 52.6
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 4.7e-35 152.1 183 44.3
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 8.8e-34 147.9 231 39.4
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 1.7e-32 143.7 231 42.0
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 2.7e-22 109.8 200 35.5
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 3.3e-20 102.8 138 42.8
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 6.2e-19 98.6 99 50.5
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 5.8e-17 92.0 178 32.6
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 9.8e-17 91.3 168 35.1
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 1.7e-13 80.5 193 29.5
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 4.3e-12 75.9 66 53.0
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 8.1e-11 71.6 97 40.2
Mapoly0007s0106 Marchantia polymorpha HOM05D007480 ORTHO05D009460 1.1e-07 61.2 134 35.8


User provided reference genes

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