Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3528 Trifolium pratense HOM05D007827 ORTHO05D009749 7.9e-128 460.7 274 100.0
Medtr3g104620 Medicago truncatula HOM05D007827 ORTHO05D009749 2.8e-72 276.2 282 55.7
Psat5g036160 Pisum sativum HOM05D007827 ORTHO05D009749 2.0e-62 243.4 275 51.6
Lj1g0018619 Lotus japonicus HOM05D007827 ORTHO05D009749 1.1e-47 194.5 281 46.6
Lalb_Chr23g0267841 Lupinus albus HOM05D007827 ORTHO05D009749 2.4e-47 193.4 273 45.4
Phvul.009G078700 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 1.8e-42 177.2 261 41.4
Lj5g0025960 Lotus japonicus HOM05D007827 ORTHO05D009749 1.4e-39 167.5 283 44.5
Medtr1g015840 Medicago truncatula HOM05D007827 ORTHO05D009749 1.5e-38 164.1 257 43.2
VMungo1309G0458 Vigna mungo HOM05D007827 ORTHO05D009749 3.8e-37 159.5 244 43.0
TPR.G13014 Trifolium pratense HOM05D007827 ORTHO05D009749 1.4e-36 157.5 292 40.4
Glyma.04G052400 Glycine max HOM05D007827 ORTHO05D009749 9.3e-36 154.8 247 43.7
Glyma.14G097100 Glycine max HOM05D007827 ORTHO05D009749 3.5e-35 152.9 298 38.9
Phvul.001G037300 Phaseolus vulgaris HOM05D007827 ORTHO05D009749 3.3e-33 146.4 291 40.2
MD15G1056900 Malus domestica HOM05D007827 ORTHO05D009749 3.1e-31 139.8 269 39.0
Psat6g021400 Pisum sativum HOM05D007827 ORTHO05D009749 3.4e-30 136.3 287 35.5
CiPaw.16G027300 Carya illinoinensis HOM05D007827 ORTHO05D009749 1.0e-29 134.8 259 35.5
QL02p000760 Quercus lobata HOM05D007827 ORTHO05D009749 4.9e-29 132.5 261 38.7
MELO3C011460.2 Cucumis melo HOM05D007827 ORTHO05D009749 5.5e-28 129.0 267 36.7
arahy.Tifrunner.gnm1.ann1.WVJ8VS Arachis hypogaea HOM05D007827 ORTHO05D009749 1.3e-26 124.4 251 42.6
CsaV3_6G032200 Cucumis sativus L. HOM05D007827 ORTHO05D009749 1.8e-26 124.0 264 36.7
arahy.Tifrunner.gnm1.ann1.S72ULK Arachis hypogaea HOM05D007827 ORTHO05D009749 8.7e-26 121.7 254 45.3
ClCG08G010040 Citrullus lanatus HOM05D007827 ORTHO05D009749 8.7e-26 121.7 261 36.0
VMungo0647G1789 Vigna mungo HOM05D007827 ORTHO05D009749 7.4e-25 118.6 288 38.5
Prupe.1G409500 Prunus persica HOM05D007827 ORTHO05D009749 3.7e-24 116.3 262 35.9
Sed0014394 Sechium edule HOM05D007827 ORTHO05D009749 4.8e-24 115.9 259 34.0
Haze_18158 Corylus avellana HOM05D007827 ORTHO05D009749 1.8e-23 114.0 261 33.3
RcHm_v2.0_Chr6g0311201 Rosa chinensis HOM05D007827 ORTHO05D009749 5.3e-23 112.5 287 30.3
FAN24G3029 Fragaria x ananassa HOM05D007827 ORTHO05D009749 7.6e-22 108.6 282 33.3
FvH4_2g31620 Fragaria vesca HOM05D007827 ORTHO05D009749 2.9e-21 106.7 282 33.3
Sed0025262 Sechium edule HOM05D007827 ORTHO05D009749 3.2e-20 103.2 265 32.5
Cpa.g.sc7.157 Carica papaya HOM05D007827 ORTHO05D009749 9.3e-20 101.7 285 33.3
FAN15G3566 Fragaria x ananassa HOM05D007827 ORTHO05D009749 4.6e-19 99.4 264 31.8
Manes.16G082000 Manihot esculenta HOM05D007827 ORTHO05D009749 2.5e-17 93.6 220 34.1
Nitab4.5_0007177g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 5.7e-17 92.4 273 30.4
Peaxi162Scf00297g00062 Petunia axillaris HOM05D007827 ORTHO05D009749 1.3e-16 91.3 266 30.1
Nitab4.5_0002039g0090 Nicotiana tabacum HOM05D007827 ORTHO05D009749 1.7e-16 90.9 284 29.2
Sabra06G0174900 Salix brachista HOM05D007827 ORTHO05D009749 2.2e-16 90.5 248 33.1
Nitab4.5_0000972g0020 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.8e-16 90.1 273 30.0
Cc08_g10870 Coffea canephora HOM05D007827 ORTHO05D009749 3.7e-16 89.7 272 29.0
Rhsim11G0042400 Rhododendron simsii HOM05D007827 ORTHO05D009749 1.1e-15 88.2 270 31.1
Nitab4.5_0007037g0010 Nicotiana tabacum HOM05D007827 ORTHO05D009749 2.4e-15 87.0 284 29.2
Potri.006G226200 Populus trichocarpa HOM05D007827 ORTHO05D009749 3.1e-15 86.7 246 33.7
Dinv28003 Davidia involucrata HOM05D007827 ORTHO05D009749 1.2e-14 84.7 266 28.9
arahy.Tifrunner.gnm1.ann1.EI9IQY Arachis hypogaea HOM05D007827 ORTHO05D009749 2.0e-14 84.0 218 32.1
CAN.G130.10 Capsicum annuum HOM05D007827 ORTHO05D009749 1.0e-13 81.6 269 29.0
Aqoxy7G01166 Aquilegia oxysepala HOM05D007827 ORTHO05D009749 2.9e-13 80.1 260 28.8
Hma1.2p1_0801F.1_g220250 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 6.5e-13 79.0 272 32.0
CSS0031213 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 1.1e-12 78.2 283 27.6
Solyc06g011440.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 1.1e-12 78.2 268 29.1
Thecc.09G056900 Theobroma cacao HOM05D007827 ORTHO05D009749 1.4e-12 77.8 265 30.2
Ciclev10010468m.g Citrus clementina HOM05D007827 ORTHO05D009749 3.2e-12 76.6 228 29.4
Sopen06g006480 Solanum pennellii HOM05D007827 ORTHO05D009749 4.2e-12 76.3 268 28.7
Peaxi162Scf01001g00001 Petunia axillaris HOM05D007827 ORTHO05D009749 7.2e-12 75.5 264 27.3
PGSC0003DMG400008199 Solanum tuberosum HOM05D007827 ORTHO05D009749 2.1e-11 73.9 283 26.9
Oeu018628.1 Olea europaea HOM05D007827 ORTHO05D009749 7.9e-11 72.0 261 26.4
Gorai.009G043700 Gossypium raimondii HOM05D007827 ORTHO05D009749 2.3e-10 70.5 237 29.1
FAN27G2967 Fragaria x ananassa HOM05D007827 ORTHO05D009749 1.5e-09 67.8 181 30.4
Gohir.D05G042650 Gossypium hirsutum HOM05D007827 ORTHO05D009749 1.5e-09 67.8 237 28.7
Solyc08g062840.1 Solanum lycopersicum HOM05D007827 ORTHO05D009749 1.5e-09 67.8 284 26.1
Atru.chr7.1942 Acer truncatum HOM05D007827 ORTHO05D009749 2.0e-09 67.4 76 51.3
Hma1.2p1_1933F.1_g308040 Hydrangea macrophylla HOM05D007827 ORTHO05D009749 3.3e-09 66.6 272 39.3
Oeu047101.1 Olea europaea HOM05D007827 ORTHO05D009749 4.4e-09 66.2 59 55.9
Migut.A00115 Erythranthe guttata HOM05D007827 ORTHO05D009749 5.7e-09 65.9 59 54.2
SalBow4G1896 Salvia bowleyana HOM05D007827 ORTHO05D009749 7.4e-09 65.5 72 48.6
CSS0004361 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.2e-08 63.9 63 50.8
CSS0026056 Camellia sinensis var. sinensis HOM05D007827 ORTHO05D009749 2.2e-08 63.9 252 25.8
COL.COLO4_08756 Corchorus olitorius HOM05D030950 ORTHO05D009749 2.2e-08 63.9 265 27.5
Actinidia01227 Actinidia chinensis HOM05D007827 ORTHO05D009749 3.7e-08 63.2 253 34.4
ECA240G3049 Erigeron canadensis HOM05D007827 ORTHO05D009749 4.8e-08 62.8 75 45.3
TAR626G1076 Trochodendron aralioides HOM05D007827 ORTHO05D009749 1.4e-07 61.2 257 25.3
PGSC0003DMG400029878 Solanum tuberosum HOM05D007827 ORTHO05D009749 2.4e-07 60.5 271 26.9
Lsat_1_v5_gn_6_13921 Lactuca sativa HOM05D007827 ORTHO05D009749 5.3e-07 59.3 62 51.6
MBI04_g36906_MAGBIO Magnolia biondii HOM05D007827 ORTHO05D009749 5.3e-07 59.3 280 25.7
Sopen08g018370 Solanum pennellii HOM05D007827 ORTHO05D009749 1.5e-06 57.8 258 25.6
DCAR_003136 Daucus carota HOM05D007827 ORTHO05D009749 5.9e-06 55.8 255 24.7
unitig_37.g12945 Utricularia gibba HOM05D007827 ORTHO05D009749 5.9e-06 55.8 54 55.6


User provided reference genes

Program Settings