Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 2.0e-30 135.2 72 100.0
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 3.4e-22 107.8 66 81.8
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 4.5e-22 107.5 64 81.2
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 4.5e-22 107.5 64 81.2
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 1.1e-20 102.8 66 72.7
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 9.3e-20 99.8 69 75.4
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 2.3e-18 95.1 68 69.1
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 3.3e-17 91.3 64 70.3
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 9.7e-17 89.7 66 65.2
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 1.6e-16 89.0 66 65.2
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 1.6e-16 89.0 66 62.1
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 2.2e-16 88.6 66 60.6
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 2.8e-16 88.2 66 66.7
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 2.8e-16 88.2 66 57.6
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 3.7e-16 87.8 66 59.1
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 6.3e-16 87.0 66 62.1
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.4e-15 85.9 67 62.7
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 1.8e-15 85.5 66 62.1
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 5.3e-15 84.0 66 59.1
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 5.3e-15 84.0 66 60.6
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 5.3e-15 84.0 65 60.0
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 9.0e-15 83.2 69 59.4
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.2e-14 82.8 66 60.6
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.2e-14 82.8 66 60.6
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 1.2e-14 82.8 66 56.1
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 1.5e-14 82.4 66 56.1
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.5e-14 82.4 66 56.1
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.5e-14 82.4 66 57.6
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.5e-14 82.4 66 59.1
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 1.5e-14 82.4 66 57.6
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.0e-14 82.0 58 65.5
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 2.6e-14 81.6 67 56.7
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 2.6e-14 81.6 58 63.8
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 4.5e-14 80.9 71 56.3
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 7.7e-14 80.1 66 56.1
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 6.5e-13 77.0 68 51.5
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.4e-12 75.9 66 54.5
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.4e-12 75.9 66 54.5
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 1.9e-12 75.5 59 54.2
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 1.9e-12 75.5 66 50.0
Medtr6g086730 Medicago truncatula HOM05D007950 ORTHO05D009951 2.5e-12 75.1 50 78.0
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 3.2e-12 74.7 66 50.0
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 4.2e-12 74.3 66 53.0
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 9.4e-12 73.2 61 52.5
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 1.2e-11 72.8 66 50.0
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 6.1e-11 70.5 65 47.7
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 1.0e-10 69.7 65 50.8
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 1.8e-10 68.9 66 45.5
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 3.0e-10 68.2 66 45.5
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 3.0e-10 68.2 66 45.5
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 3.9e-10 67.8 66 48.5
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 3.9e-10 67.8 63 47.6
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 5.1e-10 67.4 63 47.6
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 6.7e-10 67.0 67 46.3
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 6.7e-10 67.0 63 46.0
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 8.8e-10 66.6 64 48.4
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 8.8e-10 66.6 66 47.0
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 8.8e-10 66.6 66 47.0
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 1.1e-09 66.2 66 45.5
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 2.0e-09 65.5 62 50.0
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 2.0e-09 65.5 72 47.2
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 2.5e-09 65.1 62 48.4
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 4.3e-09 64.3 62 45.2
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 9.7e-09 63.2 65 49.2
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 2.8e-08 61.6 68 45.6
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 3.7e-08 61.2 62 41.9
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 3.7e-08 61.2 62 41.9
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 6.3e-08 60.5 62 41.9
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 1.1e-07 59.7 68 47.1
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 1.4e-07 59.3 69 43.5
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 3.1e-07 58.2 63 42.9
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 1.5e-06 55.8 57 42.1
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 4.5e-06 54.3 71 39.4
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 5.9e-06 53.9 62 37.1


User provided reference genes

Program Settings