Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35170 Trifolium pratense HOM05D008118 ORTHO05D012883 1.9e-68 262.3 125 100.0
TPR.G20486 Trifolium pratense HOM05D008118 ORTHO05D012883 2.6e-62 241.9 125 92.8
TPR.G36322 Trifolium pratense HOM05D008118 ORTHO05D012883 5.9e-62 240.7 125 91.2
TPR.G10682 Trifolium pratense HOM05D008118 ORTHO05D012883 2.2e-61 238.8 125 91.2
TPR.G39459 Trifolium pratense HOM05D008118 ORTHO05D012883 1.4e-60 236.1 125 91.2
TPR.G40598 Trifolium pratense HOM05D008118 ORTHO05D012883 4.2e-60 234.6 125 89.6
TPR.G27560 Trifolium pratense HOM05D008118 ORTHO05D012883 7.2e-60 233.8 125 88.8
TPR.G28107 Trifolium pratense HOM05D000150 ORTHO05D000108 1.2e-59 233.0 125 88.8
TPR.G17660 Trifolium pratense HOM05D008118 ORTHO05D012883 2.0e-57 225.7 113 93.8
TPR.G35807 Trifolium pratense HOM05D008118 ORTHO05D012883 4.2e-52 208.0 120 81.7
TPR.G39906 Trifolium pratense HOM05D008118 ORTHO05D012883 9.4e-52 206.8 120 81.7
TPR.G21336 Trifolium pratense HOM05D008118 ORTHO05D012883 1.4e-50 203.0 125 77.6
TPR.G20344 Trifolium pratense HOM05D008118 ORTHO05D012883 2.3e-50 202.2 103 96.1
TPR.G25 Trifolium pratense HOM05D008118 ORTHO05D012883 3.7e-48 194.9 105 90.5
TPR.G40625 Trifolium pratense HOM05D008118 ORTHO05D012883 1.0e-42 176.8 95 88.4
TPR.G20369 Trifolium pratense HOM05D008118 ORTHO05D012883 2.6e-41 172.2 87 93.1
TPR.G7248 Trifolium pratense HOM05D008118 ORTHO05D012883 1.8e-39 166.0 81 96.3
TPR.G31543 Trifolium pratense HOM05D008118 ORTHO05D012883 7.2e-36 154.1 88 81.8
TPR.G40015 Trifolium pratense HOM05D008118 ORTHO05D012883 6.8e-34 147.5 90 77.8
Medtr4g069290 Medicago truncatula HOM05D008118 ORTHO05D011003 8.6e-21 104.0 124 48.4
Medtr6g036940 Medicago truncatula HOM05D008118 ORTHO05D011003 1.5e-20 103.2 115 52.2
Medtr7g055890 Medicago truncatula HOM05D008118 ORTHO05D011003 2.8e-19 99.0 119 49.6
Medtr2g083590 Medicago truncatula HOM05D008118 ORTHO05D011003 1.1e-18 97.1 117 50.4
Medtr5g053480 Medicago truncatula HOM05D008118 ORTHO05D011003 1.4e-18 96.7 117 51.3
Medtr1g052845 Medicago truncatula HOM05D008118 ORTHO05D261005 4.4e-17 91.7 118 49.2
Medtr4g061900 Medicago truncatula HOM05D008118 ORTHO05D260629 8.3e-16 87.4 113 48.7
Medtr6g466390 Medicago truncatula HOM05D008118 ORTHO05D011003 8.3e-16 87.4 83 55.4
Medtr7g061620 Medicago truncatula HOM05D008118 ORTHO05D011003 8.3e-16 87.4 118 47.5
Medtr7g061360 Medicago truncatula HOM05D008118 ORTHO05D011003 1.1e-15 87.0 118 47.5
Medtr1g053405 Medicago truncatula HOM05D008118 ORTHO05D257646 1.4e-15 86.7 110 47.3
Medtr4g022300 Medicago truncatula HOM05D008118 ORTHO05D262149 2.4e-15 85.9 110 46.4
Medtr5g067630 Medicago truncatula HOM05D008118 ORTHO05D011003 5.4e-15 84.7 119 45.4
Medtr5g063995 Medicago truncatula HOM05D008118 ORTHO05D011003 7.0e-15 84.3 119 45.4
Medtr1g036730 Medicago truncatula HOM05D008118 ORTHO05D011003 9.2e-15 84.0 109 48.6
Medtr8g470030 Medicago truncatula HOM05D008118 ORTHO05D011003 9.2e-15 84.0 119 47.9
Medtr2g058650 Medicago truncatula HOM05D008118 ORTHO05D011003 1.2e-14 83.6 118 47.5
Medtr3g060830 Medicago truncatula HOM05D008118 ORTHO05D011003 1.6e-14 83.2 118 49.2
Medtr5g009790 Medicago truncatula HOM05D008118 ORTHO05D011003 1.6e-14 83.2 119 45.4
Medtr5g072370 Medicago truncatula HOM05D008118 ORTHO05D011003 1.6e-14 83.2 119 46.2
Medtr5g044895 Medicago truncatula HOM05D008118 ORTHO05D011003 3.5e-14 82.0 119 46.2
Medtr0005s0220 Medicago truncatula HOM05D008118 ORTHO05D011003 6.0e-14 81.3 114 46.5
Medtr5g080380 Medicago truncatula HOM05D008118 ORTHO05D011003 1.3e-13 80.1 90 55.6
Medtr6g043270 Medicago truncatula HOM05D008118 ORTHO05D011003 1.3e-13 80.1 119 44.5
TPR.G973 Trifolium pratense HOM05D008118 ORTHO05D012883 1.3e-13 80.1 61 67.2
Medtr3g028620 Medicago truncatula HOM05D008118 ORTHO05D011003 2.3e-13 79.3 118 44.1
Medtr3g033840 Medicago truncatula HOM05D008118 ORTHO05D011003 6.6e-13 77.8 117 45.3
Medtr6g042710 Medicago truncatula HOM05D008118 ORTHO05D011003 1.1e-12 77.0 90 54.4
Medtr0214s0030 Medicago truncatula HOM05D008118 ORTHO05D011003 1.5e-12 76.6 95 48.4
Medtr0360s0010 Medicago truncatula HOM05D008118 ORTHO05D011003 1.9e-12 76.3 98 48.0
Medtr4g045603 Medicago truncatula HOM05D008118 ORTHO05D011003 2.5e-12 75.9 118 42.4
Medtr8g466300 Medicago truncatula HOM05D008118 ORTHO05D011003 3.3e-12 75.5 122 43.4
Medtr7g051090 Medicago truncatula HOM05D008118 ORTHO05D011003 5.6e-12 74.7 90 53.3
Medtr5g048800 Medicago truncatula HOM05D008118 ORTHO05D011003 1.2e-11 73.6 95 47.4
Medtr7g056780 Medicago truncatula HOM05D008118 ORTHO05D011003 8.1e-11 70.9 59 62.7
Medtr0083s0070 Medicago truncatula HOM05D008118 ORTHO05D011003 1.4e-10 70.1 103 44.7
Medtr8g479440 Medicago truncatula HOM05D008118 ORTHO05D011003 3.1e-10 68.9 65 56.9
Medtr2g061240 Medicago truncatula HOM05D008118 ORTHO05D011003 5.2e-10 68.2 65 55.4
Medtr4g026610 Medicago truncatula HOM05D008118 ORTHO05D012883 8.9e-10 67.4 61 59.0
Medtr3g034000 Medicago truncatula HOM05D008118 ORTHO05D011003 2.6e-09 65.9 99 43.4
Medtr8g075640 Medicago truncatula HOM05D008118 ORTHO05D266095 9.9e-09 63.9 89 43.8
Medtr4g054700 Medicago truncatula HOM05D008118 ORTHO05D011003 1.3e-08 63.5 65 52.3
Medtr5g055710 Medicago truncatula HOM05D008118 ORTHO05D011003 1.1e-07 60.5 59 55.9
Medtr0520s0020 Medicago truncatula HOM05D008118 ORTHO05D011003 6.0e-06 54.7 57 54.4


User provided reference genes

Program Settings