Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35147 Trifolium pratense HOM05D005635 ORTHO05D006838 4.1e-44 181.0 93 100.0
Psat5g100720 Pisum sativum HOM05D005635 ORTHO05D006838 9.5e-41 169.9 93 93.5
Lj6g0024009 Lotus japonicus HOM05D005635 ORTHO05D006838 1.1e-36 156.4 93 86.0
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 1.4e-36 156.0 90 88.9
Glyma.18G001800 Glycine max HOM05D005635 ORTHO05D006838 1.9e-36 155.6 93 84.9
VMungo1383G0014 Vigna mungo HOM05D005635 ORTHO05D006838 1.9e-36 155.6 93 83.9
Glyma.11G255300 Glycine max HOM05D005635 ORTHO05D006838 3.2e-36 154.8 93 84.9
Ca_16400_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 7.8e-35 150.2 89 86.5
arahy.Tifrunner.gnm1.ann1.KV01DF Arachis hypogaea HOM05D005635 ORTHO05D006838 7.3e-33 143.7 92 81.5
arahy.Tifrunner.gnm1.ann1.0WSK8D Arachis hypogaea HOM05D005635 ORTHO05D006838 9.5e-33 143.3 92 81.5
Phvul.001G267200 Phaseolus vulgaris HOM05D005635 ORTHO05D006838 4.7e-32 141.0 93 76.3
VMungo1127G1500 Vigna mungo HOM05D005635 ORTHO05D006838 2.0e-30 135.6 83 79.5
Lalb_Chr23g0278351 Lupinus albus HOM05D005635 ORTHO05D006838 4.4e-30 134.4 93 76.3
Duzib212G0953 Durio zibethinus HOM05D005635 ORTHO05D006838 7.5e-30 133.7 90 74.4
QL10p057536 Quercus lobata HOM05D005635 ORTHO05D006838 7.5e-30 133.7 91 72.5
MD15G1148200 Malus domestica HOM05D005635 ORTHO05D006838 2.2e-29 132.1 92 69.6
QL10p057166 Quercus lobata HOM05D005635 ORTHO05D006838 2.9e-29 131.7 91 71.4
Thecc.04G163300 Theobroma cacao HOM05D005635 ORTHO05D006838 3.7e-29 131.3 90 74.4
GSVIVG01038182001 Vitis vinifera HOM05D005635 ORTHO05D006838 6.4e-29 130.6 91 71.4
CiPaw.01G169400 Carya illinoinensis HOM05D005635 ORTHO05D006838 1.1e-28 129.8 91 70.3
RcHm_v2.0_Chr2g0085171 Rosa chinensis HOM05D005635 ORTHO05D006838 1.1e-28 129.8 91 70.3
CSS0001444 Camellia sinensis var. sinensis HOM05D005635 ORTHO05D006838 2.4e-28 128.6 91 72.5
MELO3C010738.2 Cucumis melo HOM05D005635 ORTHO05D006838 7.1e-28 127.1 90 70.0
FAN28G2262 Fragaria x ananassa HOM05D005635 ORTHO05D006838 7.1e-28 127.1 91 69.2
Haze_00856 Corylus avellana HOM05D005635 ORTHO05D006838 1.2e-27 126.3 98 67.3
FvH4_1g00540 Fragaria vesca HOM05D005635 ORTHO05D006838 1.2e-27 126.3 91 69.2
THA.LOC104802334 Tarenaya hassleriana HOM05D005635 ORTHO05D006838 1.2e-27 126.3 91 70.3
FAN23G1844 Fragaria x ananassa HOM05D005635 ORTHO05D006838 1.6e-27 125.9 91 68.1
Solyc03g059170.2 Solanum lycopersicum HOM05D005635 ORTHO05D006838 1.0e-26 123.2 91 72.5
Sopen03g013370 Solanum pennellii HOM05D005635 ORTHO05D006838 1.0e-26 123.2 91 72.5
Sp5g03370 Schrenkiella parvula HOM05D005635 ORTHO05D006838 1.3e-26 122.9 93 68.8
TWI15G0946 Tripterygium wilfordii HOM05D005635 ORTHO05D006838 1.3e-26 122.9 92 69.6
AT3G59780 Arabidopsis thaliana HOM05D005635 ORTHO05D006838 1.7e-26 122.5 91 71.4
Potri.013G128300 Populus trichocarpa HOM05D005635 ORTHO05D006838 2.3e-26 122.1 92 67.4
Sed0015570 Sechium edule HOM05D005635 ORTHO05D006838 2.3e-26 122.1 90 68.9
Atru.chr4.1498 Acer truncatum HOM05D005635 ORTHO05D006838 3.0e-26 121.7 91 64.8
ClCG08G017200 Citrullus lanatus HOM05D005635 ORTHO05D006838 3.9e-26 121.3 90 67.8
Thhalv10005829m.g Eutrema salsugineum HOM05D005635 ORTHO05D006838 3.9e-26 121.3 81 77.8
FAN26G0446 Fragaria x ananassa HOM05D005635 ORTHO05D006838 3.9e-26 121.3 91 67.0
Cfa015678 Carpinus fangiana HOM05D005635 ORTHO05D006838 5.1e-26 120.9 98 65.3
Cc03_g14460 Coffea canephora HOM05D005635 ORTHO05D006838 5.1e-26 120.9 85 70.6
Duzib151G1049 Durio zibethinus HOM05D005635 ORTHO05D006838 5.1e-26 120.9 90 68.9
Cpa.g.sc9.387 Carica papaya HOM05D005635 ORTHO05D006838 6.6e-26 120.6 92 68.5
Gohir.A09G213616 Gossypium hirsutum HOM05D005635 ORTHO05D006838 8.6e-26 120.2 92 68.5
Gohir.D09G212700 Gossypium hirsutum HOM05D005635 ORTHO05D006838 1.1e-25 119.8 92 68.5
Gorai.006G232500 Gossypium raimondii HOM05D005635 ORTHO05D006838 1.1e-25 119.8 92 68.5
CsaV3_2G025410 Cucumis sativus L. HOM05D005635 ORTHO05D006838 1.5e-25 119.4 90 67.8
AL5G41820 Arabidopsis lyrata HOM05D005635 ORTHO05D006838 1.9e-25 119.0 91 69.2
Aa31LG10G14030 Aethionema arabicum HOM05D005635 ORTHO05D006838 3.3e-25 118.2 89 66.3
Rhsim09G0007900 Rhododendron simsii HOM05D005635 ORTHO05D006838 4.3e-25 117.9 85 69.4
DCAR_029617 Daucus carota HOM05D005635 ORTHO05D006838 5.6e-25 117.5 87 73.6
Peaxi162Scf00883g00320 Petunia axillaris HOM05D005635 ORTHO05D006838 7.3e-25 117.1 91 67.0
A07p24820 Brassica napus HOM05D005635 ORTHO05D006838 9.5e-25 116.7 87 70.1
BraA07t30126Z Brassica rapa HOM05D005635 ORTHO05D006838 9.5e-25 116.7 87 70.1
Manes.05G131200 Manihot esculenta HOM05D005635 ORTHO05D006838 9.5e-25 116.7 91 63.7
Nn7g37529 Nelumbo nucifera HOM05D005635 ORTHO05D006838 9.5e-25 116.7 85 72.9
CANSAT56G0139 Cannabis sativa HOM05D005635 ORTHO05D006838 1.2e-24 116.3 86 68.6
ECA233G1690 Erigeron canadensis HOM05D005635 ORTHO05D006838 1.2e-24 116.3 91 67.0
Carub.0005s2650 Capsella rubella HOM05D005635 ORTHO05D006838 1.6e-24 115.9 73 76.7
CARHR170120 Cardamine hirsuta HOM05D005635 ORTHO05D006838 1.6e-24 115.9 91 68.1
Hma1.2p1_1156F.1_g262300 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 1.6e-24 115.9 75 77.3
BcaC08g45005 Brassica carinata HOM05D005635 ORTHO05D006838 2.1e-24 115.5 87 69.0
BolC6t37802H Brassica oleracea HOM05D005635 ORTHO05D006838 2.1e-24 115.5 87 69.0
C06p26400 Brassica napus HOM05D005635 ORTHO05D006838 2.8e-24 115.2 81 72.8
Sc19g0006380 Simmondsia chinensis HOM05D005635 ORTHO05D006838 4.7e-24 114.4 85 69.4
Eucgr.L00011 Eucalyptus grandis HOM05D005635 ORTHO05D006838 8.1e-24 113.6 84 67.9
Nitab4.5_0000064g0020 Nicotiana tabacum HOM05D005635 ORTHO05D006838 8.1e-24 113.6 93 66.7
PSO832G1829 Papaver somniferum HOM05D005635 ORTHO05D006838 1.4e-23 112.8 91 65.9
TAR362G0201 Trochodendron aralioides HOM05D005635 ORTHO05D006838 1.4e-23 112.8 92 66.3
MBI07_g33481_MAGBIO Magnolia biondii HOM05D005635 ORTHO05D006838 1.8e-23 112.5 80 73.8
AUR62023776 Chenopodium quinoa HOM05D005635 ORTHO05D006838 2.3e-23 112.1 91 63.7
AUR62002413 Chenopodium quinoa HOM05D005635 ORTHO05D006838 3.1e-23 111.7 91 64.8
SGA_v2.0_scaffold66G22529 Striga asiatica HOM05D005635 ORTHO05D006838 3.1e-23 111.7 84 69.0
PSO210G4833 Papaver somniferum HOM05D005635 ORTHO05D006838 1.2e-22 109.8 91 63.7
Migut.D00990 Erythranthe guttata HOM05D005635 ORTHO05D006838 1.5e-22 109.4 74 70.3
HanXRQChr02g0059091 Helianthus annuus HOM05D005635 ORTHO05D006838 1.5e-22 109.4 81 69.1
Sed0022147 Sechium edule HOM05D005635 ORTHO05D006838 1.5e-22 109.4 90 64.4
Nitab4.5_0002913g0010 Nicotiana tabacum HOM05D005635 ORTHO05D006838 2.6e-22 108.6 93 64.5
EL10Ac3g06107 Beta vulgaris HOM05D005635 ORTHO05D006838 3.4e-22 108.2 84 66.7
Lsat_1_v5_gn_6_67720 Lactuca sativa HOM05D005635 ORTHO05D006838 7.6e-22 107.1 83 65.1
Os01g0896500 Oryza sativa ssp. japonica HOM05D005635 ORTHO05D006838 7.6e-22 107.1 77 68.8
Potri.019G095833 Populus trichocarpa HOM05D005635 ORTHO05D006838 7.6e-22 107.1 82 68.3
Lj3C160T4 Lonicera japonica HOM05D005635 ORTHO05D006838 9.9e-22 106.7 85 68.2
Gohir.A10G145200 Gossypium hirsutum HOM05D005635 ORTHO05D006838 1.3e-21 106.3 75 72.0
Potri.019G097901 Populus trichocarpa HOM05D005635 ORTHO05D006838 2.2e-21 105.5 90 65.6
Zm00001eb144770 Zea mays HOM05D005635 ORTHO05D006838 3.7e-21 104.8 75 66.7
Gohir.D10G121800 Gossypium hirsutum HOM05D005635 ORTHO05D006838 4.9e-21 104.4 75 70.7
Gorai.011G133900 Gossypium raimondii HOM05D005635 ORTHO05D006838 4.9e-21 104.4 75 70.7
SalBow7G2884 Salvia bowleyana HOM05D005635 ORTHO05D006838 3.2e-20 101.7 79 67.1
Aqoxy5G00015 Aquilegia oxysepala HOM05D005635 ORTHO05D006838 5.4e-20 100.9 81 64.2
C08p34730 Brassica napus HOM05D005635 ORTHO05D006838 4.6e-19 97.8 93 58.1
unitig_32.g10984 Utricularia gibba HOM05D005635 ORTHO05D006838 2.3e-18 95.5 84 63.1
Hund22526 Selenicereus undatus HOM05D005635 ORTHO05D006838 6.6e-18 94.0 87 58.6
BcaB02g07447 Brassica carinata HOM05D005635 ORTHO05D006838 3.3e-17 91.7 62 67.7
BolC8t51075H Brassica oleracea HOM05D005635 ORTHO05D006838 9.6e-17 90.1 89 53.9
Oeu023600.1 Olea europaea HOM05D005635 ORTHO05D006838 9.6e-17 90.1 71 70.4
HPP92_007065 Vanilla planifolia HOM05D005635 ORTHO05D006838 1.6e-16 89.4 75 58.7
HPP92_007033 Vanilla planifolia HOM05D005635 ORTHO05D006838 2.8e-16 88.6 75 58.7
ATR0743G254 Amborella trichopoda HOM05D005635 ORTHO05D006838 8.1e-16 87.0 89 55.1
MD02G1004500 Malus domestica HOM05D005635 ORTHO05D006838 2.4e-15 85.5 56 73.2
BcaC07g40503 Brassica carinata HOM05D005635 ORTHO05D006838 4.0e-15 84.7 59 71.2
Sabra13G0107200 Salix brachista HOM05D005635 ORTHO05D006838 5.8e-14 80.9 58 70.7
BcaC07g40447 Brassica carinata HOM05D005635 ORTHO05D006838 1.3e-13 79.7 61 68.9
PGR044G0369 Punica granatum HOM05D005635 ORTHO05D006838 1.7e-13 79.3 49 81.6
SEGI_21812 Sequoiadendron giganteum HOM05D005635 ORTHO05D006838 5.1e-10 67.8 81 48.1
BcaB02g07446 Brassica carinata HOM05D000137 ORTHO05D021629 6.6e-10 67.4 50 64.0
Mapoly0056s0110 Marchantia polymorpha HOM05D005635 ORTHO05D006838 1.6e-08 62.8 90 44.4
Pp3c5_10150 Physcomitrium patens HOM05D005635 ORTHO05D006838 2.1e-08 62.4 96 40.6


User provided reference genes

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