Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 8.8e-204 713.4 356 100.0
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 2.3e-188 662.1 356 92.7
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 3.0e-188 661.8 355 92.4
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 5.0e-175 617.8 339 90.9
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 5.6e-174 614.4 352 86.6
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 6.2e-173 610.9 352 86.4
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 2.1e-168 595.9 333 87.4
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 2.6e-163 578.9 340 84.7
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 4.9e-162 574.7 332 84.0
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 4.1e-161 571.6 348 82.8
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 2.4e-153 545.8 369 76.2
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 4.6e-152 541.6 325 81.8
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 3.4e-147 525.4 320 80.9
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 1.7e-146 523.1 314 81.2
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 1.1e-145 520.4 317 80.4
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 1.1e-145 520.4 317 80.4
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 1.4e-145 520.0 315 81.0
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.6e-144 516.5 326 77.6
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.5e-142 509.2 312 80.1
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 4.3e-142 508.4 342 75.1
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 5.6e-142 508.1 343 73.5
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 3.6e-141 505.4 314 79.3
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 5.3e-140 501.5 312 79.2
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 4.5e-139 498.4 314 79.0
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 9.9e-139 497.3 313 79.6
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.3e-138 496.9 314 78.0
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 1.7e-138 496.5 313 79.2
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 3.8e-138 495.4 312 77.6
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 4.9e-138 495.0 325 75.4
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.1e-137 493.8 312 77.9
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 1.1e-137 493.8 312 77.2
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.1e-137 493.8 312 78.2
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 1.4e-137 493.4 320 76.6
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.9e-137 493.0 312 77.9
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.9e-137 493.0 321 76.9
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 4.2e-137 491.9 312 77.6
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 7.1e-137 491.1 319 75.2
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 7.1e-137 491.1 313 78.6
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 9.3e-137 490.7 314 77.1
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 6.0e-136 488.0 313 77.3
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 7.9e-136 487.6 313 77.3
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 7.9e-136 487.6 313 77.3
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 7.9e-136 487.6 312 76.6
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 7.9e-136 487.6 337 73.6
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 7.9e-136 487.6 314 77.4
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 8.7e-135 484.2 314 76.1
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.3e-133 480.3 313 75.7
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 2.4e-132 476.1 349 66.8
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 2.4e-132 476.1 315 73.7
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 1.2e-131 473.8 339 71.4
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 1.2e-131 473.8 315 73.0
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 2.6e-131 472.6 312 73.7
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.4e-131 472.2 340 68.5
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 7.6e-131 471.1 314 72.3
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 2.9e-130 469.2 313 71.9
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 6.5e-130 468.0 313 71.9
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 8.4e-130 467.6 339 69.6
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 7.1e-129 464.5 348 70.7
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 1.2e-128 463.8 341 68.6
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.6e-128 463.4 349 65.3
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.6e-128 463.4 310 72.9
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 3.5e-128 462.2 314 72.9
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 4.1e-124 448.7 289 75.8
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 5.3e-124 448.4 311 68.8
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 2.2e-122 443.0 270 81.1
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 3.8e-122 442.2 312 71.2
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 1.4e-121 440.3 300 71.7
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.5e-121 439.5 325 67.4
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 7.2e-121 438.0 323 66.9
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 9.3e-121 437.6 321 67.9
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 9.3e-121 437.6 323 66.6
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 1.2e-120 437.2 340 63.5
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 3.5e-120 435.6 312 68.3
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 1.8e-119 433.3 318 68.6
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 6.7e-119 431.4 279 76.7
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 6.7e-119 431.4 323 65.9
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 5.3e-116 421.8 323 65.3
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 5.3e-116 421.8 323 65.0
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 1.7e-114 416.8 317 63.1
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 2.2e-114 416.4 346 61.6
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 1.4e-113 413.7 307 71.3
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 2.5e-113 412.9 313 63.6
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 5.5e-113 411.8 313 63.3
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 1.4e-111 407.1 314 65.0
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 3.8e-106 389.0 253 76.3
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 2.7e-104 382.9 248 74.6
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 4.7e-104 382.1 239 80.3
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 3.3e-102 375.9 328 58.2
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 2.4e-100 369.8 309 57.0
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 1.6e-99 367.1 313 60.7
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 2.6e-94 349.7 290 58.3
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 8.0e-88 328.2 316 50.6
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 5.7e-86 322.0 309 51.5
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 6.3e-85 318.5 259 60.2
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.8e-84 317.0 320 48.4
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.8e-84 317.0 320 48.4
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.7e-83 311.6 338 46.2
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.3e-82 310.8 348 45.1
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 2.2e-82 310.1 324 52.8
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.1e-80 302.0 349 44.7
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 7.5e-78 295.0 224 64.3
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.7e-77 293.9 314 46.2
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.8e-77 293.1 346 44.5
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 5.4e-76 288.9 324 44.8
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 3.6e-72 276.2 340 46.5
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 1.5e-70 270.8 322 44.1
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 2.0e-67 260.4 309 48.2
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 8.1e-56 221.9 213 51.2
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 4.6e-43 179.5 270 40.4
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.0e-30 137.5 115 61.7
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 8.4e-29 132.1 107 58.9
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 1.8e-07 61.2 40 70.0


User provided reference genes

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