Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35 Trifolium pratense HOM05D000645 ORTHO05D000494 2.7e-74 282.0 145 100.0
Medtr1g007740 Medicago truncatula HOM05D000645 ORTHO05D000494 6.6e-41 171.0 147 66.0
Ca_12780_v3 Cicer arietinum L. HOM05D000645 ORTHO05D000494 3.5e-34 148.7 157 56.1
Psat6g035840 Pisum sativum HOM05D000645 ORTHO05D000494 4.6e-34 148.3 144 59.7
Lalb_Chr11g0067021 Lupinus albus HOM05D000645 ORTHO05D000494 1.3e-15 87.0 140 42.9
Lalb_Chr08g0240061 Lupinus albus HOM05D000645 ORTHO05D000494 4.1e-14 82.0 141 41.8
arahy.Tifrunner.gnm1.ann1.HCI8A4 Arachis hypogaea HOM05D000645 ORTHO05D000494 1.2e-13 80.5 152 39.5
arahy.Tifrunner.gnm1.ann1.S6BA0E Arachis hypogaea HOM05D000645 ORTHO05D000494 2.0e-13 79.7 145 39.3
arahy.Tifrunner.gnm1.ann1.J0VNL8 Arachis hypogaea HOM05D000645 ORTHO05D000494 3.4e-13 79.0 152 38.8
TAR629G2932 Trochodendron aralioides HOM05D000645 ORTHO05D000494 1.0e-12 77.4 124 39.5
COL.COLO4_16807 Corchorus olitorius HOM05D000645 ORTHO05D000494 1.3e-12 77.0 124 37.1
Atru.chr5.707 Acer truncatum HOM05D000645 ORTHO05D000494 5.0e-12 75.1 142 35.2
Cpa.g.sc96.58 Carica papaya HOM05D000645 ORTHO05D000494 5.0e-12 75.1 142 34.5
Potri.015G009700 Populus trichocarpa HOM05D000645 ORTHO05D000494 8.5e-12 74.3 147 34.0
Sabra15G0007700 Salix brachista HOM05D000645 ORTHO05D000494 1.4e-11 73.6 148 37.2
Actinidia27298 Actinidia chinensis HOM05D000645 ORTHO05D000494 1.9e-11 73.2 133 35.3
Duzib084G0791 Durio zibethinus HOM05D000645 ORTHO05D000494 2.5e-11 72.8 124 36.3
RcHm_v2.0_Chr1g0381741 Rosa chinensis HOM05D000645 ORTHO05D000494 2.5e-11 72.8 128 36.7
Aqoxy7G00047 Aquilegia oxysepala HOM05D000645 ORTHO05D000494 4.2e-11 72.0 126 35.7
Duzib138G0076 Durio zibethinus HOM05D000645 ORTHO05D000494 9.4e-11 70.9 130 35.4
Manes.01G039500 Manihot esculenta HOM05D000645 ORTHO05D000494 9.4e-11 70.9 141 36.2
Prupe.2G314500 Prunus persica HOM05D000645 ORTHO05D000494 9.4e-11 70.9 149 38.9
QL09p007810 Quercus lobata HOM05D000645 ORTHO05D000494 9.4e-11 70.9 133 39.1
Actinidia06133 Actinidia chinensis HOM05D000645 ORTHO05D000494 1.2e-10 70.5 125 36.0
Manes.05G020700 Manihot esculenta HOM05D000645 ORTHO05D000494 1.2e-10 70.5 142 34.5
Actinidia07977 Actinidia chinensis HOM05D000645 ORTHO05D000494 2.1e-10 69.7 152 38.2
arahy.Tifrunner.gnm1.ann1.9TDX6K Arachis hypogaea HOM05D000645 ORTHO05D000494 2.1e-10 69.7 140 37.9
Oeu061003.2 Olea europaea HOM05D000645 ORTHO05D000494 2.1e-10 69.7 120 36.7
FAN10G3550 Fragaria x ananassa HOM05D000645 ORTHO05D000494 2.7e-10 69.3 127 39.4
Gohir.D07G141800 Gossypium hirsutum HOM05D000645 ORTHO05D000494 2.7e-10 69.3 132 39.4
FvH4_7g32140 Fragaria vesca HOM05D000645 ORTHO05D000494 3.6e-10 68.9 127 39.4
FAN06G0837 Fragaria x ananassa HOM05D000645 ORTHO05D000494 3.6e-10 68.9 127 39.4
FAN01G0083 Fragaria x ananassa HOM05D000645 ORTHO05D000494 4.6e-10 68.6 127 39.4
FAN10G3217 Fragaria x ananassa HOM05D000645 ORTHO05D000494 4.6e-10 68.6 127 39.4
Gohir.A07G136400 Gossypium hirsutum HOM05D000645 ORTHO05D000494 4.6e-10 68.6 132 39.4
Gorai.001G153400 Gossypium raimondii HOM05D000645 ORTHO05D000494 4.6e-10 68.6 132 39.4
MBI12_g15040_MAGBIO Magnolia biondii HOM05D000645 ORTHO05D000494 4.6e-10 68.6 137 35.8
CiPaw.05G199100 Carya illinoinensis HOM05D000645 ORTHO05D000494 1.0e-09 67.4 124 36.3
Cfa016206 Carpinus fangiana HOM05D000645 ORTHO05D000494 1.4e-09 67.0 141 37.6
Gorai.007G110600 Gossypium raimondii HOM05D000645 ORTHO05D000494 1.4e-09 67.0 133 38.3
Thecc.03G202600 Theobroma cacao HOM05D000645 ORTHO05D000494 1.4e-09 67.0 124 34.7
TWI39G0544 Tripterygium wilfordii HOM05D000645 ORTHO05D000494 1.4e-09 67.0 133 38.3
Dinv35354 Davidia involucrata HOM05D000645 ORTHO05D000494 2.3e-09 66.2 131 38.2
Glyma.06G131400 Glycine max HOM05D000645 ORTHO05D000494 2.3e-09 66.2 147 34.0
Medtr3g491920 Medicago truncatula HOM05D000645 ORTHO05D000494 2.3e-09 66.2 135 34.1
Actinidia20255 Actinidia chinensis HOM05D000645 ORTHO05D000494 3.0e-09 65.9 149 38.9
Cc02_g01240 Coffea canephora HOM05D000645 ORTHO05D000494 3.9e-09 65.5 124 34.7
TAR375G0740 Trochodendron aralioides HOM05D000645 ORTHO05D000494 3.9e-09 65.5 140 30.7
PGR042G1301 Punica granatum HOM05D000645 ORTHO05D000494 6.7e-09 64.7 135 37.8
Gohir.A11G098700 Gossypium hirsutum HOM05D000645 ORTHO05D000494 8.8e-09 64.3 133 36.8
Potri.001G086600 Populus trichocarpa HOM05D000645 ORTHO05D000494 1.1e-08 63.9 133 33.1
Duzib205G1353 Durio zibethinus HOM05D000645 ORTHO05D000494 1.5e-08 63.5 127 33.9
Thecc.01G339300 Theobroma cacao HOM05D000645 ORTHO05D000494 1.5e-08 63.5 130 33.1
Lj1g0012213 Lotus japonicus HOM05D000645 ORTHO05D000494 2.0e-08 63.2 142 36.6
TAR374G1617 Trochodendron aralioides HOM05D000645 ORTHO05D000494 2.5e-08 62.8 124 31.5
VMungo1309G2757 Vigna mungo HOM05D000645 ORTHO05D000494 2.5e-08 62.8 145 35.2
Potri.003G144400 Populus trichocarpa HOM05D000645 ORTHO05D000494 3.3e-08 62.4 135 35.6
Haze_00243 Corylus avellana HOM05D000645 ORTHO05D000494 4.3e-08 62.0 141 34.0
Duzib068G1010 Durio zibethinus HOM05D000645 ORTHO05D000494 4.3e-08 62.0 140 33.6
PSO170G5775 Papaver somniferum HOM05D000645 ORTHO05D000494 4.3e-08 62.0 139 32.4
CiPaw.12G079600 Carya illinoinensis HOM05D000645 ORTHO05D000494 5.7e-08 61.6 140 32.1
Haze_00240 Corylus avellana HOM05D000645 ORTHO05D000494 5.7e-08 61.6 141 34.0
TWI14G0132 Tripterygium wilfordii HOM05D000645 ORTHO05D000494 5.7e-08 61.6 131 31.3
Hma1.2p1_0440F.1_g153660 Hydrangea macrophylla HOM05D000645 ORTHO05D000494 7.4e-08 61.2 126 34.9
Psat5g075520 Pisum sativum HOM05D000645 ORTHO05D000494 9.7e-08 60.8 137 36.5
Potri.002G174100 Populus trichocarpa HOM05D000645 ORTHO05D000494 9.7e-08 60.8 137 32.8
CSS0021807 Camellia sinensis var. sinensis HOM05D000645 ORTHO05D000494 1.3e-07 60.5 124 31.5
CSS0040811 Camellia sinensis var. sinensis HOM05D000645 ORTHO05D000494 1.3e-07 60.5 124 31.5
Actinidia18665 Actinidia chinensis HOM05D000645 ORTHO05D000494 1.7e-07 60.1 121 31.4
Potri.012G018200 Populus trichocarpa HOM05D000645 ORTHO05D000494 1.7e-07 60.1 150 34.0
GSVIVG01038588001 Vitis vinifera HOM05D000645 ORTHO05D000494 1.7e-07 60.1 130 33.1
ATR0757G147 Amborella trichopoda HOM05D000645 ORTHO05D000494 2.2e-07 59.7 119 31.9
Dinv06366 Davidia involucrata HOM05D000645 ORTHO05D000494 2.2e-07 59.7 147 34.0
Glyma.04G233400 Glycine max HOM05D000645 ORTHO05D000494 2.2e-07 59.7 140 32.9
Manes.05G192200 Manihot esculenta HOM05D000645 ORTHO05D000494 2.2e-07 59.7 133 32.3
Lj1C1022T12 Lonicera japonica HOM05D000645 ORTHO05D000494 2.8e-07 59.3 142 34.5
AUR62022737 Chenopodium quinoa HOM05D000645 ORTHO05D000494 3.7e-07 58.9 129 31.0
THA.LOC104814935 Tarenaya hassleriana HOM05D000645 ORTHO05D000494 3.7e-07 58.9 132 31.1
Ah.05g179360 Amaranthus hybridus HOM05D000645 ORTHO05D000494 4.8e-07 58.5 125 31.2
Gohir.D11G103300 Gossypium hirsutum HOM05D000645 ORTHO05D000494 4.8e-07 58.5 133 36.1
Nn3g18921 Nelumbo nucifera HOM05D000645 ORTHO05D000494 4.8e-07 58.5 142 31.7
AUR62004518 Chenopodium quinoa HOM05D000645 ORTHO05D000494 6.3e-07 58.2 129 31.0
Sabra01G0062700 Salix brachista HOM05D000645 ORTHO05D000494 6.3e-07 58.2 134 33.6
Sabra12G0014300 Salix brachista HOM05D000645 ORTHO05D000494 6.3e-07 58.2 147 29.3
Aa31LG11G3600 Aethionema arabicum HOM05D000645 ORTHO05D000494 8.2e-07 57.8 129 34.1
COL.COLO4_06236 Corchorus olitorius HOM05D000645 ORTHO05D000494 8.2e-07 57.8 130 35.4
CSS0035932 Camellia sinensis var. sinensis HOM05D000645 ORTHO05D000494 1.1e-06 57.4 133 33.8
Sabra02G0139300 Salix brachista HOM05D000645 ORTHO05D000494 1.1e-06 57.4 138 32.6
CANSAT21G1385 Cannabis sativa HOM05D000645 ORTHO05D000494 1.4e-06 57.0 142 30.3
MD01G1224100 Malus domestica HOM05D000645 ORTHO05D000494 1.4e-06 57.0 103 40.8
CSS0003166 Camellia sinensis var. sinensis HOM05D000645 ORTHO05D000494 1.8e-06 56.6 145 31.0
CSS0036699 Camellia sinensis var. sinensis HOM05D000645 ORTHO05D000494 1.8e-06 56.6 145 31.0
DCAR_020341 Daucus carota HOM05D000645 ORTHO05D000494 1.8e-06 56.6 149 31.5
Cpa.g.sc3.112 Carica papaya HOM05D000645 ORTHO05D000494 2.4e-06 56.2 147 35.4
Haze_09130 Corylus avellana HOM05D000645 ORTHO05D000494 2.4e-06 56.2 131 32.8
MD07G1294900 Malus domestica HOM05D000645 ORTHO05D000494 2.4e-06 56.2 145 31.7
Manes.01G244100 Manihot esculenta HOM05D000645 ORTHO05D000494 3.1e-06 55.8 137 31.4
Sabra03G0105000 Salix brachista HOM05D000645 ORTHO05D000494 3.1e-06 55.8 133 33.1
EL10Ac1g00235 Beta vulgaris HOM05D000645 ORTHO05D000494 4.1e-06 55.5 142 28.9
Sed0004227 Sechium edule HOM05D000645 ORTHO05D000494 4.1e-06 55.5 137 37.2
Sc01g0002460 Simmondsia chinensis HOM05D000645 ORTHO05D000494 4.1e-06 55.5 129 31.8
Rhsim02G0249200 Rhododendron simsii HOM05D000645 ORTHO05D000494 6.9e-06 54.7 114 33.3
Hund16723 Selenicereus undatus HOM05D000645 ORTHO05D000494 6.9e-06 54.7 149 34.2
Lsat_1_v5_gn_2_136381 Lactuca sativa HOM05D000645 ORTHO05D000494 9.1e-06 54.3 150 31.3


User provided reference genes

Program Settings