Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3499 Trifolium pratense HOM05D004237 ORTHO05D005002 1.7e-135 486.5 349 100.0
Glyma.02G247200 Glycine max HOM05D004237 ORTHO05D005002 1.6e-93 347.1 349 65.9
Psat2g041040 Pisum sativum HOM05D004237 ORTHO05D005002 1.1e-92 344.4 356 65.2
Phvul.008G233700 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 8.9e-92 341.3 349 62.8
Medtr5g079680 Medicago truncatula HOM05D004237 ORTHO05D005002 2.4e-89 333.2 349 69.6
Ca_05866_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 3.2e-89 332.8 360 71.7
Ca_29976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 3.2e-89 332.8 360 71.7
Oeu047420.1 Olea europaea HOM05D004237 ORTHO05D005002 4.3e-86 322.4 353 59.8
LjContig00141g0018818 Lotus japonicus HOM05D004237 ORTHO05D005002 6.9e-84 315.1 349 66.8
Dinv14873 Davidia involucrata HOM05D004237 ORTHO05D005002 9.0e-84 314.7 365 59.2
CAN.G625.84 Capsicum annuum HOM05D004237 ORTHO05D005002 2.4e-81 306.6 355 53.8
CSS0027261 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 5.4e-81 305.4 399 48.9
Gorai.009G294600 Gossypium raimondii HOM05D004237 ORTHO05D005002 2.3e-79 300.1 398 53.8
Actinidia17655 Actinidia chinensis HOM05D004237 ORTHO05D005002 6.6e-79 298.5 349 51.0
Gohir.A05G279600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 6.6e-79 298.5 398 53.5
Nitab4.5_0002248g0060 Nicotiana tabacum HOM05D004237 ORTHO05D005002 1.1e-78 297.7 382 54.2
Sopen02g035740 Solanum pennellii HOM05D004237 ORTHO05D005002 1.9e-78 297.0 383 48.0
Atru.chr4.1671 Acer truncatum HOM05D004237 ORTHO05D005002 2.5e-78 296.6 392 54.3
Gohir.D05G281200 Gossypium hirsutum HOM05D004237 ORTHO05D005002 5.6e-78 295.4 398 53.3
FvH4_7g06071 Fragaria vesca HOM05D004237 ORTHO05D005002 1.3e-77 294.3 406 52.5
CiPaw.03G068200 Carya illinoinensis HOM05D004237 ORTHO05D005002 2.1e-77 293.5 390 47.2
GSVIVG01030867001 Vitis vinifera HOM05D004237 ORTHO05D005002 1.8e-76 290.4 353 59.5
Prupe.3G158400 Prunus persica HOM05D004237 ORTHO05D005002 3.1e-76 289.7 406 53.0
arahy.Tifrunner.gnm1.ann1.MQJ11K Arachis hypogaea HOM05D004237 ORTHO05D005002 9.0e-76 288.1 372 58.9
Sabra04G0058600 Salix brachista HOM05D004237 ORTHO05D005002 9.0e-76 288.1 404 47.5
RcHm_v2.0_Chr7g0221661 Rosa chinensis HOM05D004237 ORTHO05D005002 1.5e-75 287.3 402 52.2
SalBow3G4435 Salvia bowleyana HOM05D004237 ORTHO05D005002 1.5e-75 287.3 398 48.7
Cfa007846 Carpinus fangiana HOM05D004237 ORTHO05D005002 2.0e-75 287.0 409 51.3
arahy.Tifrunner.gnm1.ann1.68W1N1 Arachis hypogaea HOM05D004237 ORTHO05D005002 2.6e-75 286.6 371 60.4
FAN06G1641 Fragaria x ananassa HOM05D004237 ORTHO05D005002 2.6e-75 286.6 405 50.9
Potri.004G088000 Populus trichocarpa HOM05D004237 ORTHO05D005002 3.4e-75 286.2 402 58.2
Solyc02g091090.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 1.7e-74 283.9 377 46.9
Lalb_Chr10g0104521 Lupinus albus HOM05D004237 ORTHO05D005002 3.8e-74 282.7 351 61.0
Manes.03G011500 Manihot esculenta HOM05D004237 ORTHO05D005002 3.8e-74 282.7 398 51.8
Hund16204 Selenicereus undatus HOM05D004237 ORTHO05D005002 4.9e-74 282.3 403 48.9
EL10Ac2g04487 Beta vulgaris HOM05D004237 ORTHO05D005002 6.4e-74 282.0 400 44.0
Duzib106G0201 Durio zibethinus HOM05D004237 ORTHO05D005002 2.4e-73 280.0 398 48.0
MD09G1261100 Malus domestica HOM05D004237 ORTHO05D005002 1.6e-72 277.3 410 48.8
Haze_14220 Corylus avellana HOM05D004237 ORTHO05D005002 2.1e-72 276.9 401 49.4
Cc07_g08200 Coffea canephora HOM05D004237 ORTHO05D005002 6.0e-72 275.4 386 45.1
HanXRQChr09g0262291 Helianthus annuus HOM05D004237 ORTHO05D005002 6.0e-72 275.4 366 55.7
Thecc.10G175300 Theobroma cacao HOM05D004237 ORTHO05D005002 1.0e-71 274.6 401 49.1
DCAR_025876 Daucus carota HOM05D004237 ORTHO05D005002 3.0e-71 273.1 375 56.5
Rhsim08G0085800 Rhododendron simsii HOM05D004237 ORTHO05D005002 4.3e-70 269.2 372 52.4
Cpa.g.sc118.40 Carica papaya HOM05D004237 ORTHO05D005002 5.6e-70 268.9 358 51.4
ECA232G1788 Erigeron canadensis HOM05D004237 ORTHO05D005002 1.6e-69 267.3 352 47.4
TAR633G2403 Trochodendron aralioides HOM05D004237 ORTHO05D005002 1.6e-69 267.3 394 42.9
Lsat_1_v5_gn_4_154701 Lactuca sativa HOM05D004237 ORTHO05D005002 1.4e-68 264.2 376 50.5
AUR62023243 Chenopodium quinoa HOM05D004237 ORTHO05D005002 2.6e-67 260.0 393 44.3
Sc11g0008610 Simmondsia chinensis HOM05D004237 ORTHO05D005002 2.6e-67 260.0 376 44.1
Migut.H00265 Erythranthe guttata HOM05D004237 ORTHO05D005002 4.5e-67 259.2 398 45.0
Aqoxy5G01640 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 2.4e-65 253.4 403 46.7
SGA_v2.0_scaffold149G36490 Striga asiatica HOM05D004237 ORTHO05D005002 2.4e-65 253.4 357 42.9
CANSAT54G2538 Cannabis sativa HOM05D004237 ORTHO05D005002 9.3e-65 251.5 429 48.7
Hma1.2p1_3512F.1_g336510 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 2.7e-64 250.0 364 45.6
PGR004G2154 Punica granatum HOM05D004237 ORTHO05D005002 2.7e-64 250.0 414 47.6
SHI19441 Sapria himalayana HOM05D004237 ORTHO05D005002 1.9e-62 243.8 389 40.6
Nn3g18884 Nelumbo nucifera HOM05D004237 ORTHO05D005002 4.3e-62 242.7 407 41.5
ClCG05G010910 Citrullus lanatus HOM05D004237 ORTHO05D005002 6.9e-60 235.3 414 48.1
Sed0014224 Sechium edule HOM05D004237 ORTHO05D005002 2.0e-59 233.8 393 43.3
QL11p004173 Quercus lobata HOM05D004237 ORTHO05D005002 4.5e-59 232.6 410 41.0
Eucgr.F02819 Eucalyptus grandis HOM05D004237 ORTHO05D005002 2.9e-58 229.9 436 46.6
CsaV3_3G021670 Cucumis sativus L. HOM05D004237 ORTHO05D005002 4.9e-58 229.2 413 44.6
MELO3C020294.2 Cucumis melo HOM05D004237 ORTHO05D005002 1.4e-57 227.6 415 44.6
Glyma.14G069000 Glycine max HOM05D004237 ORTHO05D005002 7.6e-51 205.3 278 64.4
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 2.2e-50 203.8 389 42.2
CDE09G1075 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 1.8e-47 194.1 141 67.4
CDE02G0048 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 1.5e-46 191.0 124 71.8
MBI08_g18909_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 3.4e-43 179.9 124 67.7
Nitab4.5_0004399g0090 Nicotiana tabacum HOM05D004237 ORTHO05D005002 6.1e-40 169.1 299 52.5
MBI11_g07416_MAGBIO Magnolia biondii HOM05D004237 ORTHO05D005002 2.3e-39 167.2 121 62.0
Mapoly0008s0013 Marchantia polymorpha HOM05D004237 ORTHO05D005002 6.7e-39 165.6 122 59.0
SEGI_20207 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 8.8e-39 165.2 122 59.8
ATR0743G026 Amborella trichopoda HOM05D004237 ORTHO05D005002 1.1e-38 164.9 140 57.9
SEGI_05374 Sequoiadendron giganteum HOM05D004237 ORTHO05D005002 2.0e-38 164.1 124 59.7
HanXRQChr15g0484241 Helianthus annuus HOM05D004237 ORTHO05D005002 9.7e-38 161.8 117 59.8
Peaxi162Scf00003g00001 Petunia axillaris HOM05D004237 ORTHO05D005002 1.7e-37 161.0 298 47.0
arahy.Tifrunner.gnm1.ann1.BLV0FA Arachis hypogaea HOM05D004237 ORTHO05D005002 3.7e-37 159.8 128 59.4
arahy.Tifrunner.gnm1.ann1.T9JHLZ Arachis hypogaea HOM05D004237 ORTHO05D005002 3.7e-37 159.8 128 59.4
SGA_v2.0_scaffold31G12582 Striga asiatica HOM05D004237 ORTHO05D005002 3.7e-37 159.8 128 55.5
ATR0561G250 Amborella trichopoda HOM05D004237 ORTHO05D005002 6.3e-37 159.1 132 56.1
Peaxi162Scf00047g00110 Petunia axillaris HOM05D004237 ORTHO05D005002 6.3e-37 159.1 121 60.3
Cpa.g.sc83.32 Carica papaya HOM05D004237 ORTHO05D005002 8.2e-37 158.7 136 55.9
Oeu063463.1 Olea europaea HOM05D004237 ORTHO05D005002 8.2e-37 158.7 123 57.7
PGSC0003DMG400026424 Solanum tuberosum HOM05D004237 ORTHO05D005002 8.2e-37 158.7 122 59.0
Ca_17976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 1.1e-36 158.3 127 56.7
Rhsim02G0061200 Rhododendron simsii HOM05D004237 ORTHO05D005002 1.4e-36 157.9 128 57.0
RhsimUnG0035800 Rhododendron simsii HOM05D004237 ORTHO05D005002 1.4e-36 157.9 128 57.0
Sc13g0000310 Simmondsia chinensis HOM05D004237 ORTHO05D005002 1.4e-36 157.9 121 58.7
Actinidia11451 Actinidia chinensis HOM05D004237 ORTHO05D005002 2.4e-36 157.1 121 58.7
Medtr8g085190 Medicago truncatula HOM05D004237 ORTHO05D005002 2.4e-36 157.1 123 56.9
Psat7g073000 Pisum sativum HOM05D004237 ORTHO05D005002 2.4e-36 157.1 122 57.4
Cfa014954 Carpinus fangiana HOM05D004237 ORTHO05D005002 3.1e-36 156.8 125 56.8
Eucgr.H02692 Eucalyptus grandis HOM05D004237 ORTHO05D005002 3.1e-36 156.8 126 57.9
Oeu025033.1 Olea europaea HOM05D004237 ORTHO05D005002 3.1e-36 156.8 120 60.0
Haze_11643 Corylus avellana HOM05D004237 ORTHO05D005002 4.1e-36 156.4 125 56.8
Phvul.003G050200 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 4.1e-36 156.4 126 56.3
Potri.017G058200 Populus trichocarpa HOM05D004237 ORTHO05D005002 4.1e-36 156.4 130 54.6
Sabra17G0051800 Salix brachista HOM05D004237 ORTHO05D005002 4.1e-36 156.4 130 54.6
vmacro15560 Vaccinium macrocarpon HOM05D004237 ORTHO05D005002 4.1e-36 156.4 121 58.7
Dinv27207 Davidia involucrata HOM05D004237 ORTHO05D005002 5.3e-36 156.0 125 56.0
Nitab4.5_0007828g0040 Nicotiana tabacum HOM05D004237 ORTHO05D005002 5.3e-36 156.0 123 57.7
Lj4g0001711 Lotus japonicus HOM05D004237 ORTHO05D005002 6.9e-36 155.6 128 55.5
Solyc09g092210.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 6.9e-36 155.6 122 58.2
Sopen09g035130 Solanum pennellii HOM05D004237 ORTHO05D005002 6.9e-36 155.6 122 58.2
GSVIVG01021000001 Vitis vinifera HOM05D004237 ORTHO05D005002 9.1e-36 155.2 129 52.7
Dinv38185 Davidia involucrata HOM05D004237 ORTHO05D005002 1.2e-35 154.8 125 56.0
Glyma.05G153300 Glycine max HOM05D004237 ORTHO05D005002 1.2e-35 154.8 126 56.3
TPR.G11799 Trifolium pratense HOM05D004237 ORTHO05D005002 1.2e-35 154.8 131 54.2
Lsat_1_v5_gn_2_45661 Lactuca sativa HOM05D004237 ORTHO05D005002 2.0e-35 154.1 122 56.6
Manes.03G145100 Manihot esculenta HOM05D004237 ORTHO05D005002 2.0e-35 154.1 139 54.0
VMungo0251G2499 Vigna mungo HOM05D004237 ORTHO05D005002 2.0e-35 154.1 126 55.6
CSS0022501 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 3.4e-35 153.3 121 57.9
Hma1.2p1_2958F.1_g330800 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 3.4e-35 153.3 126 54.8
Lj2P435T33 Lonicera japonica HOM05D004237 ORTHO05D005002 4.5e-35 152.9 133 66.9
Lalb_Chr07g0186771 Lupinus albus HOM05D004237 ORTHO05D005002 4.5e-35 152.9 120 55.8
CAN.G1565.17 Capsicum annuum HOM05D004237 ORTHO05D005002 5.9e-35 152.5 122 57.4
Atru.chr4.1600 Acer truncatum HOM05D004237 ORTHO05D005002 1.0e-34 151.8 124 56.5
MSTRG.21980 Avicennia marina HOM05D004237 ORTHO05D005002 1.0e-34 151.8 142 50.7
DCAR_030819 Daucus carota HOM05D004237 ORTHO05D005002 1.0e-34 151.8 134 52.2
Prupe.1G163000 Prunus persica HOM05D004237 ORTHO05D005002 1.0e-34 151.8 137 51.1
MELO3C020354.2 Cucumis melo HOM05D004237 ORTHO05D005002 1.3e-34 151.4 128 53.9
TAR636G2161 Trochodendron aralioides HOM05D004237 ORTHO05D005002 1.3e-34 151.4 128 53.1
Duzib212G0922 Durio zibethinus HOM05D004237 ORTHO05D005002 2.2e-34 150.6 125 56.0
MD04G1016300 Malus domestica HOM05D004237 ORTHO05D005002 2.2e-34 150.6 150 47.3
unitig_45.g31537 Utricularia gibba HOM05D004237 ORTHO05D005002 2.2e-34 150.6 121 55.4
unitig_578.g16513 Utricularia gibba HOM05D004237 ORTHO05D005002 2.2e-34 150.6 121 55.4
Gohir.A10G128300 Gossypium hirsutum HOM05D004237 ORTHO05D005002 2.9e-34 150.2 127 55.1
Manes.15G056100 Manihot esculenta HOM05D004237 ORTHO05D005002 2.9e-34 150.2 126 56.3
Thecc.04G196500 Theobroma cacao HOM05D004237 ORTHO05D005002 2.9e-34 150.2 127 55.1
CiPaw.01G118000 Carya illinoinensis HOM05D004237 ORTHO05D005002 3.8e-34 149.8 125 55.2
Potri.001G318600 Populus trichocarpa HOM05D004237 ORTHO05D005002 3.8e-34 149.8 131 51.9
CsaV3_2G011170 Cucumis sativus L. HOM05D004237 ORTHO05D005002 5.0e-34 149.4 128 53.1
Sabra16G0201600 Salix brachista HOM05D004237 ORTHO05D005002 5.0e-34 149.4 131 51.9
Actinidia28992 Actinidia chinensis HOM05D004237 ORTHO05D005002 1.1e-33 148.3 121 56.2
CANSAT78G0306 Cannabis sativa HOM05D004237 ORTHO05D005002 1.4e-33 147.9 133 51.9
Ciclev10004964m.g Citrus clementina HOM05D004237 ORTHO05D005002 2.5e-33 147.1 124 54.8
FvH4_4g13400 Fragaria vesca HOM05D004237 ORTHO05D005002 3.2e-33 146.7 127 55.1
MD13G1282300 Malus domestica HOM05D004237 ORTHO05D005002 5.5e-33 146.0 138 50.7
FAN12G1632 Fragaria x ananassa HOM05D004237 ORTHO05D005002 7.2e-33 145.6 127 54.3
CDE05G0646 Ceratophyllum demersum HOM05D004237 ORTHO05D005002 1.6e-32 144.4 114 57.0
FAN07G1461 Fragaria x ananassa HOM05D004237 ORTHO05D005002 1.6e-32 144.4 127 54.3
RcHm_v2.0_Chr4g0413771 Rosa chinensis HOM05D004237 ORTHO05D005002 1.6e-32 144.4 131 51.9
Aqoxy2G03968 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 2.1e-32 144.1 140 50.0
CBR_g29388 Chara braunii HOM05D004237 ORTHO05D005002 3.6e-32 143.3 121 52.9
QL06p026437 Quercus lobata HOM05D004237 ORTHO05D005002 5.7e-30 136.0 100 60.0
HPP92_024243 Vanilla planifolia HOM05D004237 ORTHO05D005002 5.7e-30 136.0 127 49.6
RcHm_v2.0_Chr1g0334211 Rosa chinensis HOM05D004237 ORTHO05D005002 4.5e-27 126.3 277 39.7
Migut.N00416 Erythranthe guttata HOM05D004237 ORTHO05D005002 5.9e-27 125.9 99 55.6
ECA238G4613 Erigeron canadensis HOM05D004237 ORTHO05D005002 1.0e-26 125.2 95 58.9
COL.COLO4_20213 Corchorus olitorius HOM05D004237 ORTHO05D005002 3.8e-26 123.2 109 50.5
AUR62020847 Chenopodium quinoa HOM05D004237 ORTHO05D005002 5.0e-26 122.9 99 54.5
Gohir.D10G137600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 6.5e-26 122.5 108 51.9
Gorai.011G152800 Gossypium raimondii HOM05D004237 ORTHO05D005002 6.5e-26 122.5 108 51.9
Sed0001983 Sechium edule HOM05D004237 ORTHO05D005002 5.5e-25 119.4 103 50.5
RcHm_v2.0_Chr1g0333491 Rosa chinensis HOM05D003866 ORTHO05D004508 2.1e-24 117.5 95 67.4
AUR62023195 Chenopodium quinoa HOM05D004237 ORTHO05D005002 8.0e-24 115.5 299 33.8
PSO017G6634 Papaver somniferum HOM05D004237 ORTHO05D005002 2.7e-16 90.5 126 42.9
RcHm_v2.0_Chr1g0333501 Rosa chinensis HOM05D004237 ORTHO05D005002 5.9e-11 72.8 65 52.3


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