Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 8.8e-175 617.5 475 100.0
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 1.9e-137 493.4 428 85.3
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 1.7e-133 480.3 425 83.8
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 1.3e-125 454.1 421 77.4
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 7.1e-124 448.4 375 85.1
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 7.1e-124 448.4 419 76.6
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 2.3e-122 443.4 422 78.2
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 2.1e-120 436.8 416 75.0
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 1.6e-115 420.6 430 75.3
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 6.4e-109 398.7 415 74.9
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 2.3e-106 390.2 427 72.4
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 1.6e-104 384.0 420 71.0
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 3.4e-102 376.3 403 73.4
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.1e-100 371.3 401 74.6
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 1.3e-98 364.4 400 75.5
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 1.8e-98 364.0 400 71.5
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 2.3e-98 363.6 365 77.0
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 1.1e-97 361.3 398 75.4
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.1e-97 361.3 403 73.9
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 5.6e-97 359.0 422 70.9
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.3e-96 357.8 411 72.5
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 2.8e-96 356.7 370 75.9
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.8e-95 354.0 427 67.7
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 1.8e-95 354.0 399 70.9
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.0e-95 352.8 401 70.1
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 1.3e-93 347.8 425 71.5
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.2e-93 347.1 402 74.1
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 6.4e-93 345.5 399 68.2
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 1.9e-92 344.0 419 67.8
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 2.4e-92 343.6 419 72.1
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.2e-91 341.3 402 66.4
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 7.9e-91 338.6 355 71.3
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 7.9e-91 338.6 406 71.7
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 3.9e-90 336.3 405 66.2
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 5.1e-90 335.9 405 71.4
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 6.7e-90 335.5 427 67.7
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 8.7e-90 335.1 397 61.0
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 1.9e-89 334.0 426 67.8
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 3.7e-88 329.7 415 71.3
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 3.7e-88 329.7 394 61.7
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 1.1e-87 328.2 405 67.7
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.8e-87 327.4 416 62.5
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 3.1e-87 326.6 356 64.3
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.2e-86 324.7 349 71.1
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 2.0e-86 323.9 404 67.1
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 1.3e-85 321.2 414 67.4
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 4.9e-85 319.3 422 67.5
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 4.9e-85 319.3 420 67.1
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 8.4e-85 318.5 417 69.1
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 1.1e-84 318.2 419 65.2
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 1.4e-84 317.8 399 67.7
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 4.2e-84 316.2 427 60.0
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.2e-84 316.2 251 74.1
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 4.2e-84 316.2 251 74.1
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 9.3e-84 315.1 420 67.1
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 1.2e-83 314.7 422 63.0
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 2.1e-83 313.9 426 66.7
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 7.9e-83 312.0 235 81.7
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 2.3e-82 310.5 419 64.4
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 3.0e-82 310.1 372 72.3
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 3.9e-82 309.7 422 64.5
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 5.1e-82 309.3 402 68.2
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 8.7e-82 308.5 420 58.8
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 7.4e-81 305.4 410 67.6
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 9.7e-81 305.1 430 68.6
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 2.2e-80 303.9 409 56.5
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 6.3e-80 302.4 415 64.3
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 6.3e-80 302.4 424 66.5
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.1e-79 301.6 408 64.2
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 5.3e-79 299.3 408 65.0
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 6.9e-79 298.9 442 62.2
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 3.4e-78 296.6 355 67.6
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 7.6e-78 295.4 289 68.9
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.2e-77 293.9 394 66.2
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 2.2e-77 293.9 251 72.1
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 1.4e-76 291.2 415 63.1
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.4e-76 291.2 251 72.5
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 2.7e-75 287.0 352 67.9
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 7.9e-75 285.4 165 86.1
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 2.3e-74 283.9 259 66.0
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.5e-73 281.2 343 67.3
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 1.3e-72 278.1 200 76.5
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 4.8e-72 276.2 264 62.5
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 6.3e-72 275.8 214 74.3
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 8.2e-72 275.4 165 82.4
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.4e-71 274.6 213 76.1
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 2.1e-67 260.8 252 64.7
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 5.1e-66 256.1 171 73.1
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.1e-65 255.0 147 84.4
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.0e-65 254.2 160 75.6
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 1.3e-64 251.5 165 75.2
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 2.8e-64 250.4 165 74.5
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 2.8e-64 250.4 165 74.5
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 2.8e-64 250.4 165 74.5
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 2.8e-64 250.4 222 68.5
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 1.4e-63 248.1 165 73.9
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.5e-62 244.6 167 74.3
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 1.0e-61 241.9 222 67.1
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 4.2e-60 236.5 264 59.5
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 1.5e-57 228.0 165 70.3
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 2.8e-56 223.8 164 67.7
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.1e-52 211.8 210 56.2
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.0e-50 205.3 375 61.6
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.2e-48 197.6 172 58.7
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.7e-48 196.8 163 62.0
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 9.1e-47 192.2 166 60.8
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 9.1e-47 192.2 166 60.8
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 5.4e-39 166.4 152 58.6
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 4.0e-34 150.2 165 51.5
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 1.0e-29 135.6 167 47.9
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 2.3e-26 124.4 166 44.0
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 1.7e-21 108.2 161 43.5
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.2e-17 95.5 139 41.7
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 2.4e-15 87.8 62 71.0
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 7.3e-12 76.3 95 48.4
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 1.4e-10 72.0 112 38.4
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 2.2e-08 64.7 82 45.1
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 4.6e-06 57.0 113 35.4


User provided reference genes

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