Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3487 Trifolium pratense HOM05D008294 ORTHO05D010468 8.3e-59 230.3 130 100.0
Medtr5g079600 Medicago truncatula HOM05D008294 ORTHO05D010468 1.7e-43 179.5 125 71.2
Glyma.02G246900 Glycine max HOM05D008294 ORTHO05D010468 1.7e-27 126.3 122 55.7
Lj1g0007014 Lotus japonicus HOM05D008294 ORTHO05D010468 2.4e-26 122.5 124 54.0
Psat2g041240 Pisum sativum HOM05D008294 ORTHO05D010468 3.2e-26 122.1 129 57.4
Phvul.008G234000 Phaseolus vulgaris HOM05D008294 ORTHO05D010468 4.3e-23 111.7 125 48.8
Glyma.14G069300 Glycine max HOM05D008294 ORTHO05D010468 1.1e-21 107.1 123 49.6
Lalb_Chr04g0251301 Lupinus albus HOM05D008294 ORTHO05D010468 1.7e-19 99.8 124 44.4
Lalb_Chr17g0346181 Lupinus albus HOM05D008294 ORTHO05D010468 5.4e-18 94.7 126 46.0
arahy.Tifrunner.gnm1.ann1.HG0CBG Arachis hypogaea HOM05D008294 ORTHO05D010468 9.2e-18 94.0 126 42.9
arahy.Tifrunner.gnm1.ann1.RHD4AQ Arachis hypogaea HOM05D008294 ORTHO05D010468 1.2e-17 93.6 126 42.1
VMungo0647G1342 Vigna mungo HOM05D008294 ORTHO05D010468 3.0e-16 89.0 125 43.2
Cpa.g.sc604.2 Carica papaya HOM05D008294 ORTHO05D010468 3.6e-14 82.0 91 44.0
Potri.004G088300 Populus trichocarpa HOM05D008294 ORTHO05D010468 4.8e-14 81.6 122 40.2
GSVIVG01030864001 Vitis vinifera HOM05D008294 ORTHO05D010468 8.1e-14 80.9 124 34.7
Sabra17G0107200 Salix brachista HOM05D008294 ORTHO05D010468 2.4e-13 79.3 123 37.4
Potri.017G128700 Populus trichocarpa HOM05D008294 ORTHO05D010468 9.0e-13 77.4 123 36.6
QL11p004113 Quercus lobata HOM05D008294 ORTHO05D010468 2.0e-12 76.3 88 48.9
Thecc.04G121200 Theobroma cacao HOM05D008294 ORTHO05D010468 2.0e-12 76.3 108 38.9
Manes.01G115600 Manihot esculenta HOM05D008294 ORTHO05D010468 4.4e-12 75.1 85 43.5
Gorai.008G058300 Gossypium raimondii HOM05D008294 ORTHO05D010468 7.6e-12 74.3 85 43.5
Cc07_g08180 Coffea canephora HOM05D008294 ORTHO05D010468 1.3e-11 73.6 105 36.2
Gohir.D12G055400 Gossypium hirsutum HOM05D008294 ORTHO05D010468 1.3e-11 73.6 116 37.1
Eucgr.F02821 Eucalyptus grandis HOM05D008294 ORTHO05D010468 2.2e-11 72.8 70 44.3
Oeu054753.1 Olea europaea HOM05D008294 ORTHO05D010468 2.9e-11 72.4 89 39.3
Atru.chr13.2285 Acer truncatum HOM05D008294 ORTHO05D010468 3.8e-11 72.0 124 37.1
Prupe.3G159000 Prunus persica HOM05D008294 ORTHO05D010468 1.9e-10 69.7 83 38.6
HanXRQChr14g0439951 Helianthus annuus HOM05D008294 ORTHO05D010468 1.2e-09 67.0 105 34.3
TAR017G0001 Trochodendron aralioides HOM05D008294 ORTHO05D010468 2.1e-09 66.2 121 33.9
Sed0009315 Sechium edule HOM05D008294 ORTHO05D010468 6.0e-09 64.7 87 36.8
ECA238G3741 Erigeron canadensis HOM05D008294 ORTHO05D010468 2.3e-08 62.8 86 39.5
SalBow7G4521 Salvia bowleyana HOM05D008294 ORTHO05D010468 2.3e-08 62.8 87 40.2
SGA_v2.0_scaffold329G48860 Striga asiatica HOM05D008294 ORTHO05D010468 2.3e-08 62.8 54 53.7
MSTRG.3520 Avicennia marina HOM05D008294 ORTHO05D010468 3.0e-08 62.4 93 39.8
Ciclev10013091m.g Citrus clementina HOM05D008294 ORTHO05D010468 3.0e-08 62.4 122 32.0
ClCG05G010930 Citrullus lanatus HOM05D008294 ORTHO05D010468 6.6e-08 61.2 68 41.2
MELO3C020292.2 Cucumis melo HOM05D008294 ORTHO05D010468 6.6e-08 61.2 63 46.0
DCAR_025875 Daucus carota HOM05D008294 ORTHO05D010468 6.6e-08 61.2 124 30.6
CsaV3_3G021650 Cucumis sativus L. HOM05D008294 ORTHO05D010468 1.3e-06 57.0 72 40.3
Lsat_1_v5_gn_2_81341 Lactuca sativa HOM05D008294 ORTHO05D010468 1.3e-06 57.0 85 36.5
MBI10_g08546_MAGBIO Magnolia biondii HOM05D008294 ORTHO05D010468 1.3e-06 57.0 108 34.3
Peaxi162Scf00118g00016 Petunia axillaris HOM05D008294 ORTHO05D010468 3.6e-06 55.5 114 33.3
Nitab4.5_0002366g0040 Nicotiana tabacum HOM05D008294 ORTHO05D010468 6.2e-06 54.7 87 34.5
Nn3g18213 Nelumbo nucifera HOM05D008294 ORTHO05D010468 8.1e-06 54.3 104 26.0


User provided reference genes

Program Settings