Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34808 Trifolium pratense HOM05D005424 ORTHO05D006726 5.1e-76 287.7 152 100.0
Ca_09953_v3 Cicer arietinum L. HOM05D005424 ORTHO05D006726 6.0e-69 264.2 152 91.4
Psat6g052720 Pisum sativum HOM05D005424 ORTHO05D006726 4.8e-66 254.6 152 87.5
Medtr1g077940 Medicago truncatula HOM05D005424 ORTHO05D006726 1.4e-65 253.1 153 90.2
Glyma.20G217700 Glycine max HOM05D005424 ORTHO05D006726 2.4e-65 252.3 152 87.5
VMungo0720G0206 Vigna mungo HOM05D005424 ORTHO05D006726 3.4e-64 248.4 152 87.5
Glyma.10G172500 Glycine max HOM05D005424 ORTHO05D006726 2.9e-63 245.4 152 85.5
Lj5g0003487 Lotus japonicus HOM05D005424 ORTHO05D006726 4.2e-62 241.5 152 84.9
arahy.Tifrunner.gnm1.ann1.BAML4E Arachis hypogaea HOM05D005424 ORTHO05D006726 2.2e-58 229.2 152 82.2
Lalb_Chr21g0311601 Lupinus albus HOM05D005424 ORTHO05D006726 3.1e-57 225.3 152 78.3
Phvul.L004801 Phaseolus vulgaris HOM05D005424 ORTHO05D006726 5.3e-57 224.6 152 80.9
Lalb_Chr21g0311581 Lupinus albus HOM05D005424 ORTHO05D006726 2.9e-55 218.8 150 77.3
Thecc.03G218200 Theobroma cacao HOM05D005424 ORTHO05D006726 4.1e-49 198.4 154 71.4
Cfa011902 Carpinus fangiana HOM05D005424 ORTHO05D006726 6.9e-49 197.6 154 68.8
COL.COLO4_10822 Corchorus olitorius HOM05D005424 ORTHO05D006726 1.2e-48 196.8 143 75.5
CiPaw.11G110500 Carya illinoinensis HOM05D005424 ORTHO05D006726 1.5e-48 196.4 154 68.8
Gohir.A12G241300 Gossypium hirsutum HOM05D005424 ORTHO05D006726 1.0e-47 193.7 154 69.5
Gohir.D12G242600 Gossypium hirsutum HOM05D005424 ORTHO05D006726 2.9e-47 192.2 143 72.0
Gorai.008G259800 Gossypium raimondii HOM05D005424 ORTHO05D006726 2.9e-47 192.2 143 72.0
Dinv12891 Davidia involucrata HOM05D005424 ORTHO05D006726 8.5e-47 190.7 147 72.1
QL02p027371 Quercus lobata HOM05D005424 ORTHO05D006726 2.1e-45 186.0 143 67.8
Duzib068G1314 Durio zibethinus HOM05D005424 ORTHO05D006726 2.7e-45 185.7 144 72.9
TAR636G1325 Trochodendron aralioides HOM05D005424 ORTHO05D006726 2.7e-45 185.7 150 69.3
Prupe.5G132500 Prunus persica HOM05D005424 ORTHO05D006726 4.7e-45 184.9 155 67.1
Manes.01G055600 Manihot esculenta HOM05D005424 ORTHO05D006726 7.9e-45 184.1 155 67.1
Potri.011G152600 Populus trichocarpa HOM05D005424 ORTHO05D006726 2.3e-44 182.6 156 67.3
GSVIVG01019675001 Vitis vinifera HOM05D005424 ORTHO05D006726 8.8e-44 180.6 158 66.5
Cpa.g.sc37.92 Carica papaya HOM05D005424 ORTHO05D006726 3.3e-43 178.7 134 70.9
MD06G1121800 Malus domestica HOM05D005424 ORTHO05D006726 4.4e-43 178.3 159 63.5
Potri.001G448900 Populus trichocarpa HOM05D005424 ORTHO05D006726 7.4e-43 177.6 156 65.4
Rhsim07G0076500 Rhododendron simsii HOM05D005424 ORTHO05D006726 9.7e-43 177.2 154 65.6
Sabra11G0148200 Salix brachista HOM05D005424 ORTHO05D006726 9.7e-43 177.2 156 66.0
Duzib205G0106 Durio zibethinus HOM05D005424 ORTHO05D006726 1.3e-42 176.8 155 65.8
Ciclev10018587m.g Citrus clementina HOM05D005424 ORTHO05D006726 2.2e-42 176.0 156 63.5
TWI81G0285 Tripterygium wilfordii HOM05D005424 ORTHO05D006726 2.2e-42 176.0 154 63.0
CANSAT21G2321 Cannabis sativa HOM05D005424 ORTHO05D006726 3.7e-42 175.3 140 69.3
Dinv18754 Davidia involucrata HOM05D005424 ORTHO05D006726 8.2e-42 174.1 154 65.6
MELO3C025037.2 Cucumis melo HOM05D005424 ORTHO05D006726 4.1e-41 171.8 151 64.9
ClCG08G001970 Citrullus lanatus HOM05D005424 ORTHO05D006726 7.0e-41 171.0 151 66.9
CsaV3_6G002490 Cucumis sativus L. HOM05D005424 ORTHO05D006726 1.2e-40 170.2 135 69.6
vmacro13840 Vaccinium macrocarpon HOM05D005424 ORTHO05D006726 7.7e-40 167.5 154 63.6
RcHm_v2.0_Chr7g0187521 Rosa chinensis HOM05D005424 ORTHO05D006726 2.9e-39 165.6 128 69.5
Solyc08g083290.4 Solanum lycopersicum HOM05D005424 ORTHO05D006726 3.8e-39 165.2 147 63.3
Sopen08g031500 Solanum pennellii HOM05D005424 ORTHO05D006726 1.1e-38 163.7 147 62.6
Cc08_g16940 Coffea canephora HOM05D005424 ORTHO05D006726 1.5e-38 163.3 160 60.0
FAN13G2865 Fragaria x ananassa HOM05D005424 ORTHO05D006726 1.9e-38 162.9 157 60.5
Nitab4.5_0002520g0100 Nicotiana tabacum HOM05D005424 ORTHO05D006726 4.2e-38 161.8 147 62.6
Sabra16G0303000 Salix brachista HOM05D005424 ORTHO05D006726 7.2e-38 161.0 131 68.7
Atru.chr9.1859 Acer truncatum HOM05D005424 ORTHO05D006726 9.4e-38 160.6 111 75.7
FAN08G3416 Fragaria x ananassa HOM05D005424 ORTHO05D006726 9.4e-38 160.6 157 61.1
Nitab4.5_0003419g0090 Nicotiana tabacum HOM05D005424 ORTHO05D006726 1.2e-37 160.2 147 61.9
FvH4_5g10620 Fragaria vesca HOM05D005424 ORTHO05D006726 6.1e-37 157.9 157 60.5
FAN18G4434 Fragaria x ananassa HOM05D005424 ORTHO05D006726 1.8e-36 156.4 156 60.3
Aqoxy7G00007 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 8.8e-36 154.1 161 56.5
Aqoxy8s003 Aquilegia oxysepala HOM05D005424 ORTHO05D006726 2.6e-35 152.5 161 56.5
Nn7g38300 Nelumbo nucifera HOM05D005424 ORTHO05D006726 2.8e-34 149.1 160 59.4
CSS0028831 Camellia sinensis var. sinensis HOM05D005424 ORTHO05D006726 2.4e-33 146.0 108 74.1
Eucgr.D01670 Eucalyptus grandis HOM05D005424 ORTHO05D006726 3.1e-33 145.6 137 62.0
MBI12_g14812_MAGBIO Magnolia biondii HOM05D005424 ORTHO05D006726 5.3e-33 144.8 158 57.6
HanXRQChr07g0192271 Helianthus annuus HOM05D005424 ORTHO05D006726 1.2e-32 143.7 155 55.5
PSO063G2765 Papaver somniferum HOM05D005424 ORTHO05D006726 3.5e-32 142.1 160 56.2
Peaxi162Scf00074g00151 Petunia axillaris HOM05D005424 ORTHO05D006726 4.5e-32 141.7 119 66.4
AUR62019939 Chenopodium quinoa HOM05D005424 ORTHO05D006726 1.3e-31 140.2 138 59.4
THA.LOC104813063 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 2.2e-31 139.4 156 55.8
CAN.G567.102 Capsicum annuum HOM05D005424 ORTHO05D006726 5.0e-31 138.3 125 60.8
Aa31LG6G7470 Aethionema arabicum HOM05D005424 ORTHO05D006726 1.1e-30 137.1 143 58.0
TAR374G0493 Trochodendron aralioides HOM05D005424 ORTHO05D006726 1.1e-30 137.1 148 57.4
PSO782G1858 Papaver somniferum HOM05D005424 ORTHO05D006726 2.5e-30 136.0 136 61.0
EL10Ac5g12404 Beta vulgaris HOM05D005424 ORTHO05D006726 9.4e-30 134.0 126 61.9
AUR62007075 Chenopodium quinoa HOM05D005424 ORTHO05D006726 9.4e-30 134.0 123 62.6
PGR031G0320 Punica granatum HOM05D005424 ORTHO05D006726 9.4e-30 134.0 112 64.3
MSTRG.13701 Avicennia marina HOM05D005424 ORTHO05D006726 2.3e-28 129.4 101 72.3
Ah.07g198200 Amaranthus hybridus HOM05D005424 ORTHO05D006726 3.0e-28 129.0 132 56.1
THA.LOC104806458 Tarenaya hassleriana HOM05D005424 ORTHO05D006726 3.0e-28 129.0 106 68.9
Hund11337 Selenicereus undatus HOM05D005424 ORTHO05D006726 6.8e-28 127.9 135 57.0
Lj2A154T41 Lonicera japonica HOM05D005424 ORTHO05D006726 8.8e-28 127.5 106 70.8
Sc01g0010800 Simmondsia chinensis HOM05D005424 ORTHO05D006726 1.2e-27 127.1 153 53.6
Thhalv10006636m.g Eutrema salsugineum HOM05D005424 ORTHO05D006726 3.4e-27 125.6 107 66.4
AL1G47110 Arabidopsis lyrata HOM05D005424 ORTHO05D006726 7.5e-27 124.4 135 57.8
Haze_09196 Corylus avellana HOM05D005424 ORTHO05D006726 1.7e-26 123.2 117 61.5
CARHR032180 Cardamine hirsuta HOM05D005424 ORTHO05D006726 4.8e-26 121.7 136 58.1
BcaB04g17977 Brassica carinata HOM05D005424 ORTHO05D006726 1.8e-25 119.8 110 62.7
Migut.E00727 Erythranthe guttata HOM05D005424 ORTHO05D006726 1.6e-24 116.7 112 60.7
AT1G32810 Arabidopsis thaliana HOM05D005424 ORTHO05D006726 4.5e-24 115.2 133 54.1
BcaC07g37610 Brassica carinata HOM05D005424 ORTHO05D006726 8.5e-23 110.9 154 49.4
SGA_v2.0_scaffold88G27243 Striga asiatica HOM05D005424 ORTHO05D006726 8.5e-23 110.9 102 66.7
BraA08t32921Z Brassica rapa HOM05D005424 ORTHO05D006726 1.9e-22 109.8 106 59.4
Sp1g28160 Schrenkiella parvula HOM05D005424 ORTHO05D006726 1.9e-22 109.8 104 59.6
Carub.0001s3113 Capsella rubella HOM05D005424 ORTHO05D006726 3.2e-22 109.0 104 62.5
A08p09200 Brassica napus HOM05D005424 ORTHO05D006726 7.2e-22 107.8 106 59.4
BolC8t47971H Brassica oleracea HOM05D005424 ORTHO05D006726 7.2e-22 107.8 106 59.4
DCAR_009582 Daucus carota HOM05D005424 ORTHO05D006726 6.1e-21 104.8 116 60.3
Lsat_1_v5_gn_6_11441 Lactuca sativa HOM05D005424 ORTHO05D006726 1.8e-20 103.2 122 53.3
DCAR_019998 Daucus carota HOM05D005424 ORTHO05D006726 2.3e-20 102.8 141 51.1
ECA233G6131 Erigeron canadensis HOM05D005424 ORTHO05D006726 3.4e-19 99.0 108 58.3
CDE11G1187 Ceratophyllum demersum HOM05D005424 ORTHO05D006726 3.1e-17 92.4 130 42.3
unitig_699.g19549 Utricularia gibba HOM05D005424 ORTHO05D006726 1.7e-15 86.7 134 44.8
PGSC0003DMG401012227 Solanum tuberosum HOM05D005424 ORTHO05D006726 5.0e-15 85.1 82 56.1
SEGI_18929 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 6.6e-15 84.7 192 39.1
SEGI_29779 Sequoiadendron giganteum HOM05D005424 ORTHO05D006726 7.3e-14 81.3 192 38.0
Oeu038526.1 Olea europaea HOM05D000700 ORTHO05D000397 9.5e-14 80.9 60 71.7
HPP92_001577 Vanilla planifolia HOM05D005424 ORTHO05D006726 1.2e-13 80.5 151 42.4
Sed0006250 Sechium edule HOM05D005424 ORTHO05D006726 2.1e-13 79.7 44 81.8
Oeu010728.1 Olea europaea HOM05D005424 ORTHO05D006726 1.4e-12 77.0 37 91.9
AagrBONN_evm.TU.Sc2ySwM_117.701 Anthoceros agrestis HOM05D005424 ORTHO05D006726 1.8e-12 76.6 116 47.4
SHI06919 Sapria himalayana HOM05D005424 ORTHO05D006726 1.2e-11 73.9 37 86.5
Os04g0221600 Oryza sativa ssp. japonica HOM05D005424 ORTHO05D006726 2.0e-11 73.2 118 45.8
Ah.12g053330 Amaranthus hybridus HOM05D001091 ORTHO05D001020 5.7e-11 71.6 63 58.7


User provided reference genes

Program Settings