Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34753 Trifolium pratense HOM05D050964 ORTHO05D000008 3.4e-77 291.6 147 100.0
TPR.G25026 Trifolium pratense HOM05D050964 ORTHO05D000008 3.0e-49 198.7 145 71.7
Medtr4g022460 Medicago truncatula HOM05D000009 ORTHO05D000008 3.1e-14 82.4 142 41.5
Medtr4g022480 Medicago truncatula HOM05D000009 ORTHO05D000008 4.5e-13 78.6 132 42.4
Medtr4g022540 Medicago truncatula HOM05D000009 ORTHO05D000008 7.8e-13 77.8 132 42.4
TPR.G20667 Trifolium pratense HOM05D000009 ORTHO05D000008 1.3e-12 77.0 144 40.3
Medtr4g021690 Medicago truncatula HOM05D000009 ORTHO05D000008 1.7e-12 76.6 131 42.0
TPR.G5608 Trifolium pratense HOM05D000009 ORTHO05D000008 4.3e-11 72.0 137 40.9
Medtr4g022560 Medicago truncatula HOM05D000009 ORTHO05D000008 5.6e-11 71.6 131 39.7
Medtr4g022960 Medicago truncatula HOM05D000009 ORTHO05D000008 7.3e-11 71.2 132 40.2
TPR.G34166 Trifolium pratense HOM05D000009 ORTHO05D000008 7.3e-11 71.2 107 42.1
TPR.G5617 Trifolium pratense HOM05D000009 ORTHO05D000008 1.6e-10 70.1 124 41.9
TPR.G20670 Trifolium pratense HOM05D000009 ORTHO05D000008 2.1e-10 69.7 149 36.9
TPR.G34109 Trifolium pratense HOM05D000009 ORTHO05D000008 4.7e-10 68.6 144 38.2
TPR.G5629 Trifolium pratense HOM05D000009 ORTHO05D000008 1.8e-09 66.6 93 45.2
Gohir.A10G015640 Gossypium hirsutum HOM05D000009 ORTHO05D000008 4.4e-08 62.0 78 47.4
Gohir.A10G015620 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.2e-07 59.7 85 44.7
Eucgr.I00474 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.9e-07 59.3 97 40.2
QL93p0049_0392 Quercus lobata HOM05D000009 ORTHO05D000008 3.7e-07 58.9 84 44.0
QL04p021203 Quercus lobata HOM05D000009 ORTHO05D000008 4.9e-07 58.5 130 33.1
Gorai.007G330900 Gossypium raimondii HOM05D000009 ORTHO05D000008 6.4e-07 58.2 97 41.2
QL04p003342 Quercus lobata HOM05D000009 ORTHO05D000008 6.4e-07 58.2 71 43.7
QL04p050457 Quercus lobata HOM05D000009 ORTHO05D000008 6.4e-07 58.2 90 41.1
Eucgr.H02956 Eucalyptus grandis HOM05D000009 ORTHO05D000008 8.3e-07 57.8 104 33.7
QL03p054181 Quercus lobata HOM05D000009 ORTHO05D000008 8.3e-07 57.8 86 38.4
QL04p003173 Quercus lobata HOM05D000009 ORTHO05D000008 8.3e-07 57.8 77 42.9
QL04p000042 Quercus lobata HOM05D000009 ORTHO05D000008 1.1e-06 57.4 81 42.0
PSO170G6124 Papaver somniferum HOM05D000009 ORTHO05D000008 1.4e-06 57.0 76 43.4
Eucgr.I00549 Eucalyptus grandis HOM05D000009 ORTHO05D000008 2.4e-06 56.2 97 39.2
Gohir.D11G336100 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.4e-06 56.2 97 38.1
MD03G1280200 Malus domestica HOM05D000009 ORTHO05D000008 2.4e-06 56.2 94 38.3
Gohir.A11G316200 Gossypium hirsutum HOM05D000009 ORTHO05D000008 3.2e-06 55.8 102 35.3
Gorai.007G365800 Gossypium raimondii HOM05D000009 ORTHO05D000008 3.2e-06 55.8 118 36.4
Gorai.007G365900 Gossypium raimondii HOM05D000009 ORTHO05D000008 3.2e-06 55.8 97 39.2
MD03G1278800 Malus domestica HOM05D000009 ORTHO05D000008 3.2e-06 55.8 108 35.2
MD03G1279600 Malus domestica HOM05D000009 ORTHO05D000008 3.2e-06 55.8 108 35.2
Gohir.A10G015680 Gossypium hirsutum HOM05D000009 ORTHO05D000008 4.1e-06 55.5 85 43.5
Gohir.A11G316500 Gossypium hirsutum HOM05D000009 ORTHO05D000008 4.1e-06 55.5 83 44.6
Gohir.D11G335200 Gossypium hirsutum HOM05D000009 ORTHO05D000008 4.1e-06 55.5 97 38.1
PSO104G0177 Papaver somniferum HOM05D000009 ORTHO05D000008 4.1e-06 55.5 81 43.2
QL04p001750 Quercus lobata HOM05D000009 ORTHO05D000008 4.1e-06 55.5 74 43.2
QL04p008975 Quercus lobata HOM05D000009 ORTHO05D000008 4.1e-06 55.5 76 44.7
CiPaw.13G156500 Carya illinoinensis HOM05D000009 ORTHO05D000008 5.4e-06 55.1 76 44.7
Gohir.A11G316926 Gossypium hirsutum HOM05D000009 ORTHO05D000008 5.4e-06 55.1 78 47.4
Gorai.007G364400 Gossypium raimondii HOM05D000009 ORTHO05D000008 5.4e-06 55.1 81 43.2
Hma1.2p1_0487F.1_g163560 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.4e-06 55.1 126 35.7
MD17G1030800 Malus domestica HOM05D000009 ORTHO05D000008 5.4e-06 55.1 79 40.5
PSO104G0277 Papaver somniferum HOM05D000009 ORTHO05D000008 5.4e-06 55.1 92 42.4
QL04p009063 Quercus lobata HOM05D000009 ORTHO05D000008 5.4e-06 55.1 76 46.1
Gohir.D11G333100 Gossypium hirsutum HOM05D000009 ORTHO05D000008 7.0e-06 54.7 81 43.2
Gohir.D11G336000 Gossypium hirsutum HOM05D000009 ORTHO05D000008 7.0e-06 54.7 97 38.1
Gorai.007G364100 Gossypium raimondii HOM05D000009 ORTHO05D000008 7.0e-06 54.7 81 43.2
QL04p001460 Quercus lobata HOM05D000009 ORTHO05D000008 7.0e-06 54.7 71 43.7
QL04p003301 Quercus lobata HOM05D000009 ORTHO05D000008 7.0e-06 54.7 71 43.7
CsaV3_6G033980 Cucumis sativus L. HOM05D000009 ORTHO05D000008 9.2e-06 54.3 103 34.0
Gohir.D11G335100 Gossypium hirsutum HOM05D000009 ORTHO05D000008 9.2e-06 54.3 81 42.0
QL04p009376 Quercus lobata HOM05D000009 ORTHO05D000008 9.2e-06 54.3 76 44.7
QL04p021141 Quercus lobata HOM05D000009 ORTHO05D000008 9.2e-06 54.3 78 44.9
QL07p029302 Quercus lobata HOM05D000009 ORTHO05D000008 9.2e-06 54.3 96 39.6


User provided reference genes

Program Settings