Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 1.9e-212 742.3 384 100.0
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 4.8e-139 498.4 389 72.5
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 2.9e-128 462.6 384 65.9
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 7.2e-127 458.0 378 67.2
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 8.8e-125 451.1 385 64.9
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.5e-124 450.3 389 63.2
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 2.4e-122 443.0 334 73.4
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 1.5e-116 423.7 392 59.4
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 9.5e-111 404.4 260 83.5
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 9.5e-103 377.9 323 63.8
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 1.5e-87 327.4 380 50.0
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 5.2e-85 318.9 214 78.5
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 2.6e-84 316.6 370 49.5
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 1.1e-77 294.7 407 45.2
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 2.6e-76 290.0 258 61.6
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 7.6e-76 288.5 258 61.6
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 9.9e-76 288.1 258 61.2
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.3e-72 276.9 250 61.2
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.6e-70 270.8 255 57.3
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 2.1e-70 270.4 255 57.3
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 3.6e-70 269.6 256 59.0
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 4.7e-70 269.2 255 57.3
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 2.4e-69 266.9 262 55.7
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 4.0e-69 266.2 289 54.3
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 6.9e-69 265.4 286 54.5
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 2.0e-68 263.8 256 58.2
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 7.6e-68 261.9 286 53.1
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 2.2e-67 260.4 272 55.5
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 5.4e-66 255.8 259 54.4
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 6.0e-65 252.3 272 51.8
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 6.6e-64 248.8 223 61.9
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 8.7e-64 248.4 248 56.9
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 1.5e-63 247.7 243 56.8
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 9.6e-63 245.0 380 42.9
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 1.8e-61 240.7 251 53.8
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 1.8e-61 240.7 255 51.0
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.8e-61 240.7 246 54.5
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 3.1e-61 240.0 267 49.4
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 2.6e-60 236.9 251 51.4
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 5.8e-60 235.7 276 51.8
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 7.6e-60 235.3 401 39.7
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 9.9e-60 235.0 252 52.4
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 1.7e-59 234.2 255 51.4
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 2.2e-59 233.8 275 49.5
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 2.4e-58 230.3 280 47.1
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 2.4e-58 230.3 255 51.0
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.5e-57 226.5 344 43.6
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 4.6e-57 226.1 255 50.6
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 1.0e-56 224.9 251 49.4
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 1.0e-56 224.9 305 45.2
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 1.3e-56 224.6 231 54.5
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 2.3e-56 223.8 370 38.9
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 2.3e-56 223.8 247 51.8
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 5.1e-56 222.6 188 64.9
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 6.7e-56 222.2 256 50.4
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 6.7e-56 222.2 256 50.0
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 6.7e-56 222.2 256 50.0
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 8.7e-56 221.9 256 50.0
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.3e-54 218.0 274 48.9
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 1.6e-54 217.6 255 46.7
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 2.8e-54 216.9 256 49.2
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 4.8e-54 216.1 285 46.7
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 6.2e-54 215.7 251 50.2
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 6.2e-54 215.7 257 48.2
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 1.4e-53 214.5 252 47.2
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 2.4e-53 213.8 187 60.4
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 2.0e-52 210.7 505 30.1
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 3.4e-52 209.9 240 47.9
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 3.4e-52 209.9 240 48.3
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 7.6e-52 208.8 284 46.1
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 8.4e-51 205.3 218 52.3
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 3.2e-50 203.4 222 52.3
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 4.2e-50 203.0 346 38.2
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 1.8e-48 197.6 255 46.3
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.0e-48 196.8 198 56.1
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 1.5e-47 194.5 374 36.4
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.4e-45 188.0 182 54.9
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 1.4e-45 188.0 269 42.8
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 4.5e-44 183.0 336 38.4
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 6.5e-43 179.1 490 30.6
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 2.1e-41 174.1 293 37.5
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 6.0e-41 172.6 510 27.8
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.3e-40 171.4 202 49.5
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 1.4e-34 151.4 134 57.5
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 7.2e-34 149.1 267 39.0
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 1.6e-33 147.9 256 37.9
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 4.8e-30 136.3 107 64.5
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 1.4e-29 134.8 148 52.0
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 4.5e-28 129.8 270 37.4
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 1.2e-25 121.7 90 68.9
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 7.4e-23 112.5 273 28.6
VMungo1309G0092 Vigna mungo HOM05D007522 ORTHO05D009518 3.8e-19 100.1 113 46.0
Cfa021487 Carpinus fangiana HOM05D000146 ORTHO05D007947 8.5e-19 99.0 257 28.4
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 7.2e-18 95.9 140 40.0
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 7.2e-18 95.9 149 40.9
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 1.1e-15 88.6 88 52.3
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 1.6e-12 78.2 51 78.4
Hund03006 Selenicereus undatus HOM05D007522 ORTHO05D009518 4.2e-10 70.1 157 33.8
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 1.2e-07 62.0 67 46.3
SMO329G0073 Selaginella moellendorffii HOM05D007522 ORTHO05D009518 1.7e-06 58.2 101 34.7


User provided reference genes

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