Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3462 Trifolium pratense HOM05D006523 ORTHO05D008212 1.9e-111 406.0 219 100.0
Medtr5g080020 Medicago truncatula HOM05D006523 ORTHO05D008212 3.3e-84 315.5 179 87.7
Ca_05884_v3 Cicer arietinum L. HOM05D006523 ORTHO05D008212 3.1e-82 308.9 177 86.4
LjContig00141g0009707 Lotus japonicus HOM05D006523 ORTHO05D008212 4.6e-70 268.5 179 75.4
Lalb_Chr10g0104601 Lupinus albus HOM05D006523 ORTHO05D008212 6.2e-67 258.1 177 74.6
Phvul.008G232100 Phaseolus vulgaris HOM05D006523 ORTHO05D008212 6.9e-66 254.6 178 74.2
VMungo0647G1953 Vigna mungo HOM05D006523 ORTHO05D008212 7.6e-65 251.1 178 71.9
Glyma.14G067900 Glycine max HOM05D006523 ORTHO05D008212 1.2e-62 243.8 173 72.8
Duzib114G1044 Durio zibethinus HOM05D006523 ORTHO05D008212 2.1e-62 243.0 173 71.7
Thecc.10G036400 Theobroma cacao HOM05D006523 ORTHO05D008212 1.3e-61 240.4 171 73.1
Gorai.012G071600 Gossypium raimondii HOM05D006523 ORTHO05D008212 1.8e-61 240.0 173 71.1
COL.COLO4_15080 Corchorus olitorius HOM05D006523 ORTHO05D008212 3.0e-61 239.2 171 71.3
THA.LOC104826739 Tarenaya hassleriana HOM05D006523 ORTHO05D008212 3.0e-61 239.2 178 68.0
Dinv15863 Davidia involucrata HOM05D006523 ORTHO05D008212 3.9e-61 238.8 171 72.5
Dinv03705 Davidia involucrata HOM05D006523 ORTHO05D008212 5.1e-61 238.4 171 72.5
Gohir.D04G064000 Gossypium hirsutum HOM05D006523 ORTHO05D008212 6.7e-61 238.0 173 70.5
Ciclev10033366m.g Citrus clementina HOM05D006523 ORTHO05D008212 1.5e-60 236.9 171 70.8
arahy.Tifrunner.gnm1.ann1.PJ9UI9 Arachis hypogaea HOM05D006523 ORTHO05D008212 5.7e-60 235.0 202 66.3
Cpa.g.sc1.423 Carica papaya HOM05D006523 ORTHO05D008212 9.6e-60 234.2 171 71.3
Gohir.A05G348500 Gossypium hirsutum HOM05D006523 ORTHO05D008212 1.3e-59 233.8 173 69.9
ECA238G1917 Erigeron canadensis HOM05D006523 ORTHO05D008212 2.8e-59 232.6 170 69.4
Manes.10G029100 Manihot esculenta HOM05D006523 ORTHO05D008212 3.7e-59 232.3 171 67.8
GSVIVG01016519001 Vitis vinifera HOM05D006523 ORTHO05D008212 3.7e-59 232.3 172 68.6
Potri.010G202200 Populus trichocarpa HOM05D006523 ORTHO05D008212 6.3e-59 231.5 170 70.0
PGR142G0925 Punica granatum HOM05D006523 ORTHO05D008212 6.3e-59 231.5 171 67.3
QL08p059471 Quercus lobata HOM05D006523 ORTHO05D008212 1.1e-58 230.7 171 69.0
TWI15G0822 Tripterygium wilfordii HOM05D006523 ORTHO05D008212 1.4e-58 230.3 173 70.5
Prupe.2G237400 Prunus persica HOM05D006523 ORTHO05D008212 2.4e-58 229.6 177 67.8
CSS0042327 Camellia sinensis var. sinensis HOM05D006523 ORTHO05D008212 3.1e-58 229.2 171 70.8
TAR633G0385 Trochodendron aralioides HOM05D006523 ORTHO05D008212 6.9e-58 228.0 171 68.4
FAN01G0853 Fragaria x ananassa HOM05D006523 ORTHO05D008212 9.0e-58 227.6 175 67.4
FvH4_7g22770 Fragaria vesca HOM05D006523 ORTHO05D008212 1.2e-57 227.3 175 67.4
CsaV3_5G026760 Cucumis sativus L. HOM05D006523 ORTHO05D008212 2.0e-57 226.5 171 68.4
FAN10G0859 Fragaria x ananassa HOM05D006523 ORTHO05D008212 2.6e-57 226.1 175 66.9
Nn8g38773 Nelumbo nucifera HOM05D006523 ORTHO05D008212 4.5e-57 225.3 172 68.6
Nitab4.5_0001040g0050 Nicotiana tabacum HOM05D006523 ORTHO05D008212 4.5e-57 225.3 172 68.0
Lsat_1_v5_gn_2_118400 Lactuca sativa HOM05D006523 ORTHO05D008212 5.9e-57 224.9 166 69.3
Cc02_g07640 Coffea canephora HOM05D006523 ORTHO05D008212 1.0e-56 224.2 172 68.0
arahy.Tifrunner.gnm1.ann1.KN5X6X Arachis hypogaea HOM05D006523 ORTHO05D008212 1.3e-56 223.8 195 66.2
Nitab4.5_0001655g0150 Nicotiana tabacum HOM05D006523 ORTHO05D008212 1.7e-56 223.4 170 67.1
Eucgr.G02942 Eucalyptus grandis HOM05D006523 ORTHO05D008212 2.9e-56 222.6 170 67.1
MD07G1200600 Malus domestica HOM05D006523 ORTHO05D008212 2.9e-56 222.6 177 68.4
Migut.F01454 Erythranthe guttata HOM05D006523 ORTHO05D008212 3.8e-56 222.2 175 64.6
HanXRQChr07g0201431 Helianthus annuus HOM05D006523 ORTHO05D008212 5.0e-56 221.9 172 65.1
RcHm_v2.0_Chr1g0367871 Rosa chinensis HOM05D006523 ORTHO05D008212 5.0e-56 221.9 175 65.7
Ah.16g102450 Amaranthus hybridus HOM05D006523 ORTHO05D008212 3.2e-55 219.2 174 67.8
FAN01G0003 Fragaria x ananassa HOM05D006523 ORTHO05D008212 4.2e-55 218.8 184 63.6
EL10Ac2g04730 Beta vulgaris HOM05D006523 ORTHO05D008212 5.5e-55 218.4 191 61.3
Carub.0006s1202 Capsella rubella HOM05D006523 ORTHO05D008212 5.5e-55 218.4 171 64.3
Aa31sc24G140 Aethionema arabicum HOM05D006523 ORTHO05D008212 7.2e-55 218.0 178 65.2
Actinidia23669 Actinidia chinensis HOM05D006523 ORTHO05D008212 9.3e-55 217.6 170 66.5
FAN06G3404 Fragaria x ananassa HOM05D006523 ORTHO05D008212 9.3e-55 217.6 189 62.4
MBI14_g12127_MAGBIO Magnolia biondii HOM05D006523 ORTHO05D008212 1.6e-54 216.9 171 66.7
CANSAT56G2206 Cannabis sativa HOM05D006523 ORTHO05D008212 3.6e-54 215.7 175 64.0
CANSAT56G0033 Cannabis sativa HOM05D006523 ORTHO05D008212 4.6e-54 215.3 175 64.0
AL6G24460 Arabidopsis lyrata HOM05D006523 ORTHO05D008212 7.9e-54 214.5 171 64.3
CiPaw.01G289000 Carya illinoinensis HOM05D006523 ORTHO05D008212 7.9e-54 214.5 177 65.0
SalBow6G0031 Salvia bowleyana HOM05D006523 ORTHO05D008212 1.3e-53 213.8 172 67.4
Sp6g30170 Schrenkiella parvula HOM05D006523 ORTHO05D008212 1.3e-53 213.8 171 63.7
SGA_v2.0_scaffold221G42676 Striga asiatica HOM05D006523 ORTHO05D008212 1.3e-53 213.8 183 62.8
AT5G13830 Arabidopsis thaliana HOM05D006523 ORTHO05D008212 1.8e-53 213.4 171 64.9
MSTRG.278 Avicennia marina HOM05D006523 ORTHO05D008212 1.8e-53 213.4 171 63.7
FAN03G0736 Fragaria x ananassa HOM05D006523 ORTHO05D008212 1.8e-53 213.4 199 60.3
Aqoxy1G00906 Aquilegia oxysepala HOM05D006523 ORTHO05D008212 2.3e-53 213.0 178 64.0
Haze_17085 Corylus avellana HOM05D006523 ORTHO05D008212 6.7e-53 211.5 167 67.1
AUR62039361 Chenopodium quinoa HOM05D006523 ORTHO05D008212 8.7e-53 211.1 172 65.1
MELO3C021618.2 Cucumis melo HOM05D006523 ORTHO05D008212 1.1e-52 210.7 195 59.0
Sabra10G0156100 Salix brachista HOM05D006523 ORTHO05D008212 1.9e-52 209.9 214 55.1
Thhalv10014583m.g Eutrema salsugineum HOM05D006523 ORTHO05D008212 2.5e-52 209.5 171 63.2
A10p24510 Brassica napus HOM05D006523 ORTHO05D008212 5.7e-52 208.4 174 62.1
BcaC04g24249 Brassica carinata HOM05D006523 ORTHO05D008212 1.3e-51 207.2 174 60.9
Zm00001eb062790 Zea mays HOM05D006523 ORTHO05D008212 1.3e-51 207.2 171 60.8
PSO513G0162 Papaver somniferum HOM05D006523 ORTHO05D008212 1.6e-51 206.8 176 60.8
BcaC04g19074 Brassica carinata HOM05D006523 ORTHO05D008212 2.8e-51 206.1 173 60.7
BolC9t59161H Brassica oleracea HOM05D006523 ORTHO05D008212 2.8e-51 206.1 173 60.7
CARHR199600 Cardamine hirsuta HOM05D006523 ORTHO05D008212 2.8e-51 206.1 171 62.0
unitig_61.g26158 Utricularia gibba HOM05D006523 ORTHO05D008212 4.8e-51 205.3 172 59.9
unitig_70.g32538 Utricularia gibba HOM05D006523 ORTHO05D008212 4.8e-51 205.3 172 59.9
BraA10t44516Z Brassica rapa HOM05D006523 ORTHO05D008212 6.3e-51 204.9 174 60.9
FAN06G1109 Fragaria x ananassa HOM05D006523 ORTHO05D008212 6.3e-51 204.9 175 62.9
C09p63250 Brassica napus HOM05D006523 ORTHO05D008212 1.1e-50 204.1 171 60.8
Sed0022265 Sechium edule HOM05D006523 ORTHO05D008212 1.4e-50 203.8 173 62.4
PSO339G5561 Papaver somniferum HOM05D006523 ORTHO05D008212 3.1e-50 202.6 169 62.1
Peaxi162Scf00658g00085 Petunia axillaris HOM05D006523 ORTHO05D008212 1.3e-48 197.2 149 67.8
Os03g0822300 Oryza sativa ssp. japonica HOM05D006523 ORTHO05D008212 3.8e-48 195.7 171 57.3
Nn2g11152 Nelumbo nucifera HOM05D006523 ORTHO05D008212 1.2e-46 190.7 170 59.4
CDE07G1400 Ceratophyllum demersum HOM05D006523 ORTHO05D008212 2.6e-44 183.0 163 58.3
Hund16077 Selenicereus undatus HOM05D006523 ORTHO05D008212 2.6e-44 183.0 173 60.7
ATR0559G152 Amborella trichopoda HOM05D006523 ORTHO05D008212 2.2e-43 179.9 157 61.1
SEGI_07978 Sequoiadendron giganteum HOM05D006523 ORTHO05D008212 4.8e-43 178.7 174 56.9
Atru.chr12.422 Acer truncatum HOM05D006523 ORTHO05D008212 4.5e-41 172.2 136 65.4
Mapoly0038s0066 Marchantia polymorpha HOM05D006523 ORTHO05D008212 7.7e-41 171.4 171 53.8
ClCG09G019630 Citrullus lanatus HOM05D006523 ORTHO05D008212 1.7e-40 170.2 141 63.8
Lj1C939G12 Lonicera japonica HOM05D006523 ORTHO05D008212 1.7e-40 170.2 127 70.9
DCAR_011715 Daucus carota HOM05D006523 ORTHO05D008212 1.0e-37 161.0 136 64.7
Pp3c22_17560 Physcomitrium patens HOM05D006523 ORTHO05D008212 7.4e-36 154.8 166 50.6
AagrBONN_evm.TU.Sc2ySwM_228.3773 Anthoceros agrestis HOM05D006523 ORTHO05D008212 1.3e-35 154.1 165 49.7
QL02p008420 Quercus lobata HOM05D006523 ORTHO05D008212 1.2e-33 147.5 114 71.1
vmacro07184 Vaccinium macrocarpon HOM05D006523 ORTHO05D008212 5.0e-32 142.1 193 46.6
AUR62012110 Chenopodium quinoa HOM05D006523 ORTHO05D008212 1.9e-31 140.2 135 58.5
SMO145G0100 Selaginella moellendorffii HOM05D006523 ORTHO05D008212 2.7e-30 136.3 170 45.9
Oeu016465.1 Olea europaea HOM05D006523 ORTHO05D008212 4.7e-30 135.6 113 64.6
arahy.Tifrunner.gnm1.ann1.E9XZMQ Arachis hypogaea HOM05D006523 ORTHO05D015430 7.7e-25 118.2 92 71.7
arahy.Tifrunner.gnm1.ann1.5RG0UU Arachis hypogaea HOM05D006523 ORTHO05D008212 1.2e-22 110.9 106 63.2
arahy.Tifrunner.gnm1.ann1.67Z0GV Arachis hypogaea HOM05D006523 ORTHO05D008212 3.6e-22 109.4 108 62.0
arahy.Tifrunner.gnm1.ann1.5T6QS1 Arachis hypogaea HOM05D006523 ORTHO05D008212 6.1e-22 108.6 92 68.5
arahy.Tifrunner.gnm1.ann1.96VUID Arachis hypogaea HOM05D006523 ORTHO05D008212 4.0e-21 105.9 105 61.9
arahy.Tifrunner.gnm1.ann1.TGUH8U Arachis hypogaea HOM05D006523 ORTHO05D008212 3.4e-20 102.8 105 61.0
MD01G1135900 Malus domestica HOM05D006523 ORTHO05D008212 1.4e-18 97.4 87 58.6
MCO07G108 Micromonas commoda HOM05D006523 ORTHO05D008212 5.4e-18 95.5 176 36.9
CBR_g48797 Chara braunii HOM05D001732 ORTHO05D006715 7.7e-17 91.7 248 28.6
Cre06.g302650 Chlamydomonas reinhardtii HOM05D006523 ORTHO05D008212 1.0e-16 91.3 175 36.0
CBR_g49713 Chara braunii HOM05D006523 ORTHO05D008212 3.8e-16 89.4 247 27.5
Sc14g0004660 Simmondsia chinensis HOM05D006523 ORTHO05D008212 1.0e-13 81.3 61 63.9
Cc08_g07630 Coffea canephora HOM05D006523 ORTHO05D008212 2.4e-10 70.1 59 64.4
PRCOL_00004637 Prasinoderma coloniale HOM05D006523 ORTHO05D008212 2.4e-10 70.1 149 36.2
Nitab4.5_0004559g0030 Nicotiana tabacum HOM05D006523 ORTHO05D008212 4.1e-10 69.3 69 53.6
Nitab4.5_0000004g0130 Nicotiana tabacum HOM05D006523 ORTHO05D008212 7.8e-09 65.1 93 45.2
SHI30750 Sapria himalayana HOM05D000023 ORTHO05D000014 1.7e-08 63.9 47 63.8
HPP92_015540 Vanilla planifolia HOM05D006523 ORTHO05D008212 3.8e-08 62.8 50 58.0


User provided reference genes

Program Settings