Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34603 Trifolium pratense HOM05D007414 ORTHO05D009482 2.5e-23 111.3 57 100.0
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 1.7e-16 88.6 57 84.2
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 1.9e-15 85.1 56 80.4
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 6.7e-13 76.6 57 71.9
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 8.8e-13 76.3 57 71.9
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 7.4e-12 73.2 57 71.9
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 1.7e-11 72.0 57 68.4
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 4.8e-11 70.5 57 66.7
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 1.1e-10 69.3 57 70.2
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 6.9e-10 66.6 53 64.2
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 1.2e-09 65.9 53 64.2
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 1.5e-09 65.5 61 57.4
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 1.5e-09 65.5 55 65.5
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 2.6e-09 64.7 39 71.8
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 2.6e-09 64.7 57 59.6
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 3.4e-09 64.3 46 65.2
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 4.5e-09 63.9 55 60.0
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 4.5e-09 63.9 56 58.9
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 4.5e-09 63.9 54 57.4
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 4.5e-09 63.9 59 61.0
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 5.9e-09 63.5 57 56.1
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.9e-09 63.5 57 56.1
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.9e-09 63.5 57 56.1
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.9e-09 63.5 57 56.1
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 5.9e-09 63.5 39 71.8
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 7.7e-09 63.2 49 65.3
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 7.7e-09 63.2 54 57.4
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 1.0e-08 62.8 57 56.1
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 1.3e-08 62.4 55 58.2
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 1.3e-08 62.4 39 66.7
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 2.2e-08 61.6 55 60.0
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 2.2e-08 61.6 50 56.0
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 2.2e-08 61.6 56 60.7
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 2.9e-08 61.2 58 55.2
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 6.5e-08 60.1 40 65.0
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 8.5e-08 59.7 54 53.7
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 2.5e-07 58.2 49 59.2
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.5e-07 58.2 56 53.6
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 2.5e-07 58.2 56 53.6
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 3.2e-07 57.8 57 54.4
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 4.2e-07 57.4 53 54.7
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 4.2e-07 57.4 40 62.5
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 7.2e-07 56.6 40 60.0
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 7.2e-07 56.6 40 60.0
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.6e-06 55.5 40 60.0
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 2.1e-06 55.1 53 52.8
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.1e-06 55.1 56 51.8
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 2.7e-06 54.7 37 64.9
Sabra03G0146300 Salix brachista HOM05D007414 ORTHO05D009482 2.7e-06 54.7 43 60.5
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 3.6e-06 54.3 43 58.1
Oeu014631.1 Olea europaea HOM05D007414 ORTHO05D009482 3.6e-06 54.3 55 56.4
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 3.6e-06 54.3 40 57.5
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 4.7e-06 53.9 52 55.8
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 4.7e-06 53.9 57 47.4
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 7.9e-06 53.1 39 61.5
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 7.9e-06 53.1 39 61.5
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 7.9e-06 53.1 46 50.0
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 7.9e-06 53.1 64 45.3


User provided reference genes

Program Settings