Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.9e-224 782.3 434 100.0
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 1.7e-140 503.4 465 67.5
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 1.6e-130 470.3 480 60.0
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 1.8e-81 307.4 562 41.8
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 5.4e-78 295.8 576 43.2
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 2.0e-77 293.9 497 44.7
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 1.3e-76 291.2 579 40.2
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 1.4e-70 271.2 493 44.0
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 1.0e-68 265.0 495 44.0
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 1.2e-64 251.5 438 45.2
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 6.6e-36 156.0 450 33.3
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 2.5e-35 154.1 500 30.0
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 9.6e-35 152.1 473 32.1
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 8.1e-34 149.1 475 31.2
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 5.2e-33 146.4 468 32.3
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 1.5e-32 144.8 479 32.2
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 2.9e-31 140.6 500 32.0
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.8e-31 140.2 413 32.2
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 5.4e-30 136.3 441 30.6
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 9.3e-30 135.6 423 30.7
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 6.0e-29 132.9 470 30.6
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 7.8e-29 132.5 466 33.3
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.3e-28 131.7 434 32.3
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 1.7e-28 131.3 474 30.6
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 3.0e-28 130.6 419 29.8
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 1.1e-27 128.6 462 30.1
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 1.5e-27 128.3 434 32.5
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 1.9e-27 127.9 433 32.8
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 5.6e-27 126.3 518 30.5
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 5.6e-27 126.3 478 29.7
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.8e-26 124.0 480 29.6
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 2.4e-25 120.9 473 29.6
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 3.1e-25 120.6 464 31.2
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.0e-25 120.2 458 29.7
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 9.0e-25 119.0 487 28.3
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.0e-24 117.9 457 29.8
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 2.0e-24 117.9 447 29.5
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 4.4e-24 116.7 486 28.2
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.3e-23 115.2 330 33.6
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.8e-23 113.6 449 28.1
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 7.1e-22 109.4 477 30.2
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 3.5e-21 107.1 407 29.2
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 2.3e-20 104.4 436 28.2
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 8.1e-18 95.9 450 28.4
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 2.4e-17 94.4 455 27.9
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 3.1e-17 94.0 210 37.6
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 3.1e-17 94.0 422 28.0
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 1.5e-16 91.7 92 54.3
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 7.6e-16 89.4 476 28.2
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 9.9e-16 89.0 237 33.3
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 9.9e-16 89.0 393 27.0
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 6.4e-15 86.3 229 34.9
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 2.4e-14 84.3 219 34.2
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 2.4e-14 84.3 488 26.4
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 4.2e-14 83.6 201 32.8
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 1.2e-13 82.0 164 33.5
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 1.6e-13 81.6 199 35.7
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.7e-13 80.9 322 31.1
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 4.6e-13 80.1 166 37.3
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 1.0e-12 79.0 90 44.4
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.5e-11 75.1 512 25.0
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 9.6e-11 72.4 215 30.2
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 1.6e-10 71.6 464 26.5
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 4.8e-10 70.1 416 28.1
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 8.1e-10 69.3 433 26.6
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 5.3e-09 66.6 407 29.0
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 5.3e-09 66.6 330 25.8
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 1.2e-08 65.5 80 47.5
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 2.0e-08 64.7 409 26.4
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 2.0e-08 64.7 421 25.9
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 7.1e-06 56.2 411 24.3


User provided reference genes

Program Settings