Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34575 Trifolium pratense HOM05D003726 ORTHO05D003520 2.5e-176 622.1 334 100.0
Psat2g057960 Pisum sativum HOM05D003726 ORTHO05D003520 7.7e-93 344.7 346 63.3
Medtr5g071090 Medicago truncatula HOM05D003726 ORTHO05D003520 1.5e-88 330.5 352 61.9
Ca_05609_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 4.7e-74 282.3 231 74.0
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 7.5e-72 275.0 378 52.9
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 3.6e-66 256.1 403 47.6
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 1.4e-62 244.2 403 46.7
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 1.7e-60 237.3 399 44.6
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 1.9e-59 233.8 401 44.6
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 2.9e-55 219.9 417 42.9
arahy.Tifrunner.gnm1.ann1.8UNH89 Arachis hypogaea HOM05D003726 ORTHO05D003520 4.6e-37 159.5 364 38.2
arahy.Tifrunner.gnm1.ann1.XHL4C7 Arachis hypogaea HOM05D003726 ORTHO05D003520 2.3e-36 157.1 358 38.0
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 9.6e-35 151.8 440 35.2
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 2.0e-32 144.1 443 34.5
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 9.9e-32 141.7 364 38.2
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 1.7e-31 141.0 385 35.8
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 2.9e-31 140.2 403 35.2
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 1.1e-30 138.3 417 34.3
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 4.2e-30 136.3 428 33.9
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 1.8e-28 131.0 417 34.1
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 3.9e-28 129.8 412 32.5
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 2.0e-24 117.5 412 32.0
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 3.4e-24 116.7 438 32.6
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 4.9e-23 112.8 365 34.2
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 4.9e-23 112.8 441 30.2
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.9e-22 110.9 421 32.5
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 3.2e-22 110.2 369 33.9
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 4.2e-22 109.8 428 33.2
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 5.5e-22 109.4 423 33.3
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 7.1e-22 109.0 443 30.5
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 7.1e-22 109.0 419 32.7
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 1.8e-20 104.4 393 32.6
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 2.3e-20 104.0 363 34.7
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 3.0e-20 103.6 393 31.8
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 3.0e-20 103.6 426 32.2
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 2.1e-18 97.4 426 30.8
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 3.7e-18 96.7 386 34.7
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 6.3e-18 95.9 368 31.5
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.1e-17 93.6 392 32.7
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 3.1e-17 93.6 374 31.8
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 6.9e-17 92.4 392 32.1
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 9.0e-17 92.0 433 28.4
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.0e-16 90.9 392 32.4
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 2.9e-15 87.0 438 29.7
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 5.0e-15 86.3 399 30.3
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.1e-14 85.1 360 29.7
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.4e-14 84.7 402 31.3
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 7.2e-14 82.4 303 32.0
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.2e-13 81.6 390 30.8
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 1.2e-13 81.6 400 29.8
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 2.7e-13 80.5 390 30.8
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 4.6e-13 79.7 413 28.8
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 2.3e-12 77.4 379 28.2
Lsat_1_v5_gn_8_70880 Lactuca sativa HOM05D003726 ORTHO05D003520 2.3e-12 77.4 342 30.4
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 3.9e-12 76.6 365 30.7
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 3.9e-12 76.6 383 27.9
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.5e-11 74.7 393 29.0
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 2.5e-11 73.9 371 29.9
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 7.4e-11 72.4 410 27.6
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 3.7e-10 70.1 346 29.2
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 3.7e-10 70.1 369 29.5
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 1.8e-09 67.8 369 30.4
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 2.4e-09 67.4 418 26.8
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 3.1e-09 67.0 394 29.7
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 1.5e-08 64.7 382 27.7
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 3.4e-08 63.5 365 29.6
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 4.5e-08 63.2 373 27.9
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 7.7e-08 62.4 261 26.8
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.0e-07 62.0 297 27.6
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 2.2e-07 60.8 399 26.6
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 3.8e-07 60.1 428 25.9
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 3.8e-07 60.1 423 25.5
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 1.4e-06 58.2 369 28.2
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 1.4e-06 58.2 396 25.5
BraA10t43670Z Brassica rapa HOM05D011448 ORTHO05D003520 1.9e-06 57.8 373 28.7
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.9e-06 57.8 193 33.2


User provided reference genes

Program Settings