Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34528 Trifolium pratense HOM05D007557 ORTHO05D009573 1.2e-58 229.6 111 100.0
Medtr3g074500 Medicago truncatula HOM05D007557 ORTHO05D009573 3.0e-49 198.4 105 86.7
Psat5g138560 Pisum sativum HOM05D007557 ORTHO05D009573 5.2e-46 187.6 108 82.4
Psat5g138640 Pisum sativum HOM05D007557 ORTHO05D009573 5.2e-46 187.6 108 82.4
Glyma.04G102200 Glycine max HOM05D007557 ORTHO05D009573 2.0e-45 185.7 112 76.8
Lj1g0024074 Lotus japonicus HOM05D007557 ORTHO05D009573 1.3e-44 183.0 111 81.1
Glyma.06G103500 Glycine max HOM05D007557 ORTHO05D009573 2.9e-44 181.8 112 76.8
Phvul.009G031100 Phaseolus vulgaris HOM05D007557 ORTHO05D009573 7.8e-42 173.7 111 71.2
Lalb_Chr23g0270571 Lupinus albus HOM05D007557 ORTHO05D009573 8.7e-41 170.2 107 73.8
VMungo1309G0845 Vigna mungo HOM05D007557 ORTHO05D009573 7.3e-40 167.2 111 70.3
arahy.Tifrunner.gnm1.ann1.JHL0SX Arachis hypogaea HOM05D007557 ORTHO05D009573 1.1e-38 163.3 111 66.7
arahy.Tifrunner.gnm1.ann1.VD5D9J Arachis hypogaea HOM05D007557 ORTHO05D009573 2.4e-38 162.2 111 66.7
Duzib041G0047 Durio zibethinus HOM05D007557 ORTHO05D009573 8.4e-36 153.7 111 63.1
QL12p036790 Quercus lobata HOM05D007557 ORTHO05D009573 3.5e-34 148.3 110 63.6
Eucgr.F00324 Eucalyptus grandis HOM05D007557 ORTHO05D009573 7.9e-34 147.1 111 63.1
Atru.chr13.1185 Acer truncatum HOM05D007557 ORTHO05D009573 1.0e-33 146.7 110 60.9
COL.COLO4_16396 Corchorus olitorius HOM05D007557 ORTHO05D009573 1.8e-33 146.0 111 55.9
RcHm_v2.0_Chr7g0238961 Rosa chinensis HOM05D007557 ORTHO05D009573 2.3e-33 145.6 112 59.8
Duzib093G0460 Durio zibethinus HOM05D007557 ORTHO05D009573 3.0e-33 145.2 111 57.7
TWI12G0426 Tripterygium wilfordii HOM05D007557 ORTHO05D009573 5.1e-33 144.4 111 59.5
Hund26963 Selenicereus undatus HOM05D007557 ORTHO05D009573 6.7e-33 144.1 111 58.6
Duzib093G1199 Durio zibethinus HOM05D007557 ORTHO05D009573 8.7e-33 143.7 111 57.7
Gorai.009G281300 Gossypium raimondii HOM05D007557 ORTHO05D009573 1.1e-32 143.3 111 58.6
Cpa.g.sc36.133 Carica papaya HOM05D007557 ORTHO05D009573 1.5e-32 142.9 111 59.5
CANSAT25G0704 Cannabis sativa HOM05D007557 ORTHO05D009573 4.3e-32 141.4 111 55.9
Thecc.08G106600 Theobroma cacao HOM05D007557 ORTHO05D009573 4.3e-32 141.4 112 58.0
Gohir.A05G267100 Gossypium hirsutum HOM05D007557 ORTHO05D009573 9.6e-32 140.2 111 55.9
Prupe.1G517300 Prunus persica HOM05D007557 ORTHO05D009573 9.6e-32 140.2 112 57.1
MD15G1369400 Malus domestica HOM05D007557 ORTHO05D009573 1.3e-31 139.8 112 58.0
Duzib116G0255 Durio zibethinus HOM05D007557 ORTHO05D009573 3.7e-31 138.3 111 57.7
Gohir.D05G268700 Gossypium hirsutum HOM05D007557 ORTHO05D009573 4.8e-31 137.9 111 57.7
FAN08G0381 Fragaria x ananassa HOM05D007557 ORTHO05D009573 6.2e-31 137.5 112 58.9
FvH4_5g37320 Fragaria vesca HOM05D007557 ORTHO05D009573 1.8e-30 136.0 112 58.0
FAN18G1226 Fragaria x ananassa HOM05D007557 ORTHO05D009573 1.8e-30 136.0 112 58.0
Potri.002G096700 Populus trichocarpa HOM05D007557 ORTHO05D009573 1.8e-30 136.0 111 59.5
Sed0005506 Sechium edule HOM05D007557 ORTHO05D009573 2.4e-30 135.6 111 57.7
Manes.02G152600 Manihot esculenta HOM05D007557 ORTHO05D009573 5.3e-30 134.4 112 60.7
Cc10_g07180 Coffea canephora HOM05D007557 ORTHO05D009573 9.0e-30 133.7 112 52.7
FAN04G0616 Fragaria x ananassa HOM05D007557 ORTHO05D009573 9.0e-30 133.7 111 56.8
MD08G1183000 Malus domestica HOM05D007557 ORTHO05D009573 1.2e-29 133.3 112 56.2
Nn1g05358 Nelumbo nucifera HOM05D007557 ORTHO05D009573 3.4e-29 131.7 111 55.0
Cfa013637 Carpinus fangiana HOM05D007557 ORTHO05D009573 4.5e-29 131.3 111 57.7
Prupe.1G519000 Prunus persica HOM05D007557 ORTHO05D009573 7.6e-29 130.6 112 55.4
MELO3C003576.2 Cucumis melo HOM05D007557 ORTHO05D009573 9.9e-29 130.2 111 55.9
ClCG11G014080 Citrullus lanatus HOM05D007557 ORTHO05D009573 1.7e-28 129.4 111 55.9
vmacro21268 Vaccinium macrocarpon HOM05D007557 ORTHO05D009573 1.4e-27 126.3 111 48.6
AT1G34640 Arabidopsis thaliana HOM05D007557 ORTHO05D009573 2.4e-27 125.6 110 53.6
BcaB03g13675 Brassica carinata HOM05D007557 ORTHO05D009573 4.2e-27 124.8 111 53.2
CARHR033940 Cardamine hirsuta HOM05D007557 ORTHO05D009573 5.5e-27 124.4 110 51.8
CiPaw.07G179800 Carya illinoinensis HOM05D007557 ORTHO05D009573 5.5e-27 124.4 111 55.9
Carub.0001s3264 Capsella rubella HOM05D007557 ORTHO05D009573 1.2e-26 123.2 110 52.7
HanXRQChr05g0162891 Helianthus annuus HOM05D007557 ORTHO05D009573 2.1e-26 122.5 110 50.9
Rhsim06G0081800 Rhododendron simsii HOM05D007557 ORTHO05D009573 2.1e-26 122.5 117 47.9
Sp1g29760 Schrenkiella parvula HOM05D007557 ORTHO05D009573 2.1e-26 122.5 111 52.3
Thhalv10001839m.g Eutrema salsugineum HOM05D007557 ORTHO05D009573 2.7e-26 122.1 111 49.5
TAR625G0198 Trochodendron aralioides HOM05D007557 ORTHO05D009573 2.7e-26 122.1 111 49.5
BcaC05g27757 Brassica carinata HOM05D007557 ORTHO05D009573 3.5e-26 121.7 111 50.5
BraA05t21266Z Brassica rapa HOM05D007557 ORTHO05D009573 3.5e-26 121.7 111 47.7
Ah.05g169950 Amaranthus hybridus HOM05D007557 ORTHO05D009573 6.0e-26 120.9 111 51.4
C05p37510 Brassica napus HOM05D007557 ORTHO05D009573 6.0e-26 120.9 111 47.7
BolC5t32491H Brassica oleracea HOM05D007557 ORTHO05D009573 6.0e-26 120.9 111 47.7
Aqoxy6G00779 Aquilegia oxysepala HOM05D007557 ORTHO05D009573 7.9e-26 120.6 108 50.0
Hund16904 Selenicereus undatus HOM05D007557 ORTHO05D009573 1.3e-25 119.8 109 49.5
THA.LOC104816752 Tarenaya hassleriana HOM05D007557 ORTHO05D009573 1.8e-25 119.4 111 53.2
Dinv44776 Davidia involucrata HOM05D007557 ORTHO05D009573 2.3e-25 119.0 111 48.6
Sc26g0000100 Simmondsia chinensis HOM05D007557 ORTHO05D009573 1.1e-24 116.7 109 49.5
DCAR_012735 Daucus carota HOM05D007557 ORTHO05D009573 1.9e-24 115.9 114 49.1
PSO447G0314 Papaver somniferum HOM05D007557 ORTHO05D009573 5.6e-24 114.4 111 47.7
PSO210G0208 Papaver somniferum HOM05D007557 ORTHO05D009573 7.4e-24 114.0 111 47.7
HPP92_005842 Vanilla planifolia HOM05D007557 ORTHO05D009573 9.6e-24 113.6 111 51.4
Actinidia30774 Actinidia chinensis HOM05D007557 ORTHO05D009573 1.6e-23 112.8 111 45.9
Lj4A102T59 Lonicera japonica HOM05D007557 ORTHO05D009573 3.7e-23 111.7 113 47.8
Lsat_1_v5_gn_6_103041 Lactuca sativa HOM05D007557 ORTHO05D009573 8.2e-23 110.5 111 45.0
PGR042G1134 Punica granatum HOM05D007557 ORTHO05D009573 1.1e-22 110.2 101 55.4
CDE06G2682 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 1.4e-22 109.8 108 46.3
MBI05_g37049_MAGBIO Magnolia biondii HOM05D007557 ORTHO05D009573 3.1e-22 108.6 110 42.7
Nitab4.5_0000232g0140 Nicotiana tabacum HOM05D007557 ORTHO05D009573 3.1e-22 108.6 110 44.5
CDE03G0188 Ceratophyllum demersum HOM05D007557 ORTHO05D009573 4.0e-22 108.2 108 45.4
A05p23900 Brassica napus HOM05D007557 ORTHO05D009573 5.3e-22 107.8 101 45.5
Ciclev10003485m.g Citrus clementina HOM05D007557 ORTHO05D009573 2.0e-21 105.9 80 56.2
Nitab4.5_0003631g0020 Nicotiana tabacum HOM05D007557 ORTHO05D009573 1.3e-20 103.2 108 42.6
Haze_22270 Corylus avellana HOM05D007557 ORTHO05D009573 4.9e-20 101.3 110 48.2
AUR62027760 Chenopodium quinoa HOM05D007557 ORTHO05D009573 8.4e-20 100.5 68 64.7
Os07g0622900 Oryza sativa ssp. japonica HOM05D007557 ORTHO05D009573 2.5e-19 99.0 113 43.4
Solyc12g057030.2 Solanum lycopersicum HOM05D007557 ORTHO05D009573 5.5e-19 97.8 102 42.2
Zm00001eb327820 Zea mays HOM05D007557 ORTHO05D009573 5.5e-19 97.8 113 42.5
EL10Ac1g01212 Beta vulgaris HOM05D007557 ORTHO05D009573 2.1e-18 95.9 68 60.3
PGSC0003DMG400008555 Solanum tuberosum HOM05D007557 ORTHO05D009573 6.0e-18 94.4 97 40.2
CAN.G222.163 Capsicum annuum HOM05D007557 ORTHO05D009573 1.8e-17 92.8 104 40.4
CsaV3_3G047480 Cucumis sativus L. HOM05D007557 ORTHO05D009573 2.3e-17 92.4 82 57.3
Migut.N02896 Erythranthe guttata HOM05D007557 ORTHO05D009573 2.5e-16 89.0 110 37.3
Sopen12g029690 Solanum pennellii HOM05D007557 ORTHO05D009573 4.8e-15 84.7 80 42.5
Aa31LG6G8510 Aethionema arabicum HOM05D007557 ORTHO05D009573 1.5e-13 79.7 72 48.6
Nn5g30104 Nelumbo nucifera HOM05D007557 ORTHO05D009573 5.9e-13 77.8 69 47.8
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 1.3e-12 76.6 113 36.3
Zm00001eb109640 Zea mays HOM05D007557 ORTHO05D009573 2.7e-10 68.9 73 43.8
AUR62038525 Chenopodium quinoa HOM05D007557 ORTHO05D000493 2.8e-07 58.9 38 60.5


User provided reference genes

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