Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34485 Trifolium pratense HOM05D009527 ORTHO05D013850 3.1e-142 508.4 253 100.0
TPR.G27263 Trifolium pratense HOM05D009527 ORTHO05D013850 3.5e-61 239.2 113 99.1
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 1.7e-60 236.9 229 59.0
TPR.G34991 Trifolium pratense HOM05D009527 ORTHO05D013850 1.0e-36 157.9 197 49.7
TPR.G36084 Trifolium pratense HOM05D009527 ORTHO05D013850 1.8e-33 147.1 190 46.3
TPR.G18519 Trifolium pratense HOM05D009527 ORTHO05D013850 4.4e-32 142.5 186 47.3
TPR.G26515 Trifolium pratense HOM05D009527 ORTHO05D013850 1.3e-28 131.0 144 50.0
Medtr4g078180 Medicago truncatula HOM05D009527 ORTHO05D013850 6.6e-28 128.6 125 48.8
Medtr1g115165 Medicago truncatula HOM05D009527 ORTHO05D013850 2.8e-26 123.2 125 47.2
Medtr6g007360 Medicago truncatula HOM05D009527 ORTHO05D013850 2.8e-26 123.2 125 47.2
Ca_27173_v3 Cicer arietinum L. HOM05D009527 ORTHO05D013850 7.5e-24 115.2 85 64.7
Medtr3g022250 Medicago truncatula HOM05D009527 ORTHO05D013850 1.6e-18 97.4 159 34.6
Ca_25152_v3 Cicer arietinum L. HOM05D002770 ORTHO05D003011 2.4e-17 93.6 112 40.2
TPR.G38395 Trifolium pratense HOM05D009527 ORTHO05D013850 4.9e-15 85.9 197 32.5
Medtr7g446320 Medicago truncatula HOM05D009527 ORTHO05D013850 8.4e-15 85.1 93 46.2
Ca_16686_v3 Cicer arietinum L. HOM05D009527 ORTHO05D013850 3.0e-12 76.6 107 36.4
Ca_12972_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 3.9e-12 76.3 82 40.2
VMungo0251G0994 Vigna mungo HOM05D002797 ORTHO05D010195 1.9e-11 73.9 77 44.2
VMungo1127G0760 Vigna mungo HOM05D012939 ORTHO05D010195 1.6e-10 70.9 84 36.9
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 2.1e-10 70.5 77 40.3
VMungo0720G0378 Vigna mungo HOM05D012939 ORTHO05D010195 2.8e-10 70.1 84 39.3
Ca_12114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 3.6e-10 69.7 82 34.1
VMungo0251G2087 Vigna mungo HOM05D009527 ORTHO05D010195 1.1e-09 68.2 166 28.9
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 1.4e-09 67.8 77 39.0
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 1.4e-09 67.8 149 32.2
VMungo0464G0549 Vigna mungo HOM05D001615 ORTHO05D001493 2.4e-09 67.0 95 41.1
VMungo1080G1902 Vigna mungo HOM05D000054 ORTHO05D010195 2.4e-09 67.0 76 40.8
TPR.G6695 Trifolium pratense HOM05D000004 ORTHO05D000002 6.9e-09 65.5 89 39.3
VMungo0647G0580 Vigna mungo HOM05D000660 ORTHO05D010195 6.9e-09 65.5 72 37.5
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 6.9e-09 65.5 85 32.9
Medtr5g094775 Medicago truncatula HOM05D009527 ORTHO05D013850 9.0e-09 65.1 80 42.5
VMungo0251G0341 Vigna mungo HOM05D000660 ORTHO05D010195 9.0e-09 65.1 72 36.1
VMungo0720G2098 Vigna mungo HOM05D004618 ORTHO05D005318 9.0e-09 65.1 77 37.7
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 9.0e-09 65.1 77 37.7
VMungo1309G2709 Vigna mungo HOM05D000618 ORTHO05D010195 1.2e-08 64.7 72 37.5
VMungo0331G1449 Vigna mungo HOM05D009527 ORTHO05D010195 1.5e-08 64.3 92 34.8
VMungo1127G2266 Vigna mungo HOM05D009527 ORTHO05D010195 3.4e-08 63.2 72 37.5
VMungo1080G1583 Vigna mungo HOM05D001060 ORTHO05D010195 4.4e-08 62.8 72 36.1
VMungo1383G1247 Vigna mungo HOM05D000402 ORTHO05D010195 4.4e-08 62.8 77 40.3
VMungo1127G0474 Vigna mungo HOM05D009527 ORTHO05D010195 7.6e-08 62.0 93 32.3
TPR.G17488 Trifolium pratense HOM05D000004 ORTHO05D000002 2.9e-07 60.1 105 35.2
Ca_20427_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.8e-07 59.7 86 34.9
Psat0s1287g0080 Pisum sativum HOM05D000004 ORTHO05D000002 4.9e-07 59.3 158 27.8
Psat5g016360 Pisum sativum HOM05D000004 ORTHO05D000002 4.9e-07 59.3 92 33.7
Psat4g137240 Pisum sativum HOM05D000004 ORTHO05D000002 6.4e-07 58.9 71 38.0
VMungo0540G2200 Vigna mungo HOM05D009527 ORTHO05D010195 6.4e-07 58.9 72 30.6
HanXRQChr05g0142391 Helianthus annuus HOM05D003122 ORTHO05D000002 8.4e-07 58.5 85 35.3
Psat3g172640 Pisum sativum HOM05D000028 ORTHO05D000390 8.4e-07 58.5 71 39.4
VMungo0720G0600 Vigna mungo HOM05D001082 ORTHO05D010195 8.4e-07 58.5 139 25.9
VMungo1309G2161 Vigna mungo HOM05D012939 ORTHO05D010195 8.4e-07 58.5 72 38.9
VMungo0464G1208 Vigna mungo HOM05D000004 ORTHO05D000002 1.1e-06 58.2 72 38.9
VMungo0647G1598 Vigna mungo HOM05D002051 ORTHO05D002041 1.1e-06 58.2 73 34.2
Ca_07517_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-06 57.8 86 33.7
Ca_12309_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-06 57.8 97 30.9
Ca_19490_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-06 57.8 84 35.7
FvH4_7g29722 Fragaria vesca HOM05D000004 ORTHO05D000002 1.4e-06 57.8 72 37.5
Psat5g213280 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-06 57.8 84 34.5
TPR.G31865 Trifolium pratense HOM05D000004 ORTHO05D000002 1.4e-06 57.8 89 38.2
CSS0005910 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-06 57.4 143 28.0
Ca_16129_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.4e-06 57.0 86 34.9
Psat7g152800 Pisum sativum HOM05D000004 ORTHO05D000002 2.4e-06 57.0 78 33.3
Psat1g036880 Pisum sativum HOM05D000004 ORTHO05D000002 3.2e-06 56.6 71 35.2
TPR.G23762 Trifolium pratense HOM05D001758 ORTHO05D037797 3.2e-06 56.6 40 65.0
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 4.2e-06 56.2 97 30.9
Psat2g032840 Pisum sativum HOM05D000004 ORTHO05D000002 4.2e-06 56.2 107 29.9
VMungo1080G0003 Vigna mungo HOM05D005948 ORTHO05D007689 4.2e-06 56.2 164 28.0
VMungo1383G1168 Vigna mungo HOM05D000140 ORTHO05D010195 4.2e-06 56.2 160 27.5
VMungo0720G2490 Vigna mungo HOM05D012939 ORTHO05D010195 5.4e-06 55.8 146 27.4
Ca_11127_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 7.1e-06 55.5 91 31.9
Psat5g155160 Pisum sativum HOM05D000004 ORTHO05D000002 7.1e-06 55.5 71 35.2
Psat6g022920 Pisum sativum HOM05D000004 ORTHO05D000002 7.1e-06 55.5 71 35.2
Psat7g007480 Pisum sativum HOM05D000004 ORTHO05D000002 7.1e-06 55.5 71 35.2
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 7.1e-06 55.5 100 32.0
Ca_11845_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 9.3e-06 55.1 86 33.7
VMungo0540G0013 Vigna mungo HOM05D009527 ORTHO05D010195 9.3e-06 55.1 71 32.4


User provided reference genes

Program Settings