Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34428 Trifolium pratense HOM05D001109 ORTHO05D001051 3.1e-47 191.4 96 100.0
Lalb_Chr02g0149011 Lupinus albus HOM05D001109 ORTHO05D001051 2.1e-19 99.0 97 53.6
Ca_10023_v3 Cicer arietinum L. HOM05D001109 ORTHO05D001051 1.8e-18 95.9 99 58.6
Medtr1g080360 Medicago truncatula HOM05D001109 ORTHO05D001051 1.8e-18 95.9 95 60.0
Psat6g144280 Pisum sativum HOM05D001109 ORTHO05D001051 1.4e-15 86.3 101 56.4
Lalb_Chr21g0311141 Lupinus albus HOM05D001109 ORTHO05D001051 7.1e-15 84.0 97 51.5
Phvul.011G087800 Phaseolus vulgaris HOM05D001109 ORTHO05D001051 3.5e-14 81.6 105 48.6
Lj5g0018572 Lotus japonicus HOM05D001109 ORTHO05D001051 4.6e-14 81.3 99 53.5
Lj1g0016035 Lotus japonicus HOM05D001109 ORTHO05D001051 3.3e-12 75.1 94 46.8
Phvul.011G087700 Phaseolus vulgaris HOM05D001109 ORTHO05D001051 3.3e-12 75.1 103 46.6
MELO3C008645.2 Cucumis melo HOM05D001109 ORTHO05D001051 9.6e-12 73.6 93 44.1
Glyma.10G165300 Glycine max HOM05D001109 ORTHO05D001051 1.2e-11 73.2 95 51.6
VMungo0720G1348 Vigna mungo HOM05D001109 ORTHO05D001051 1.2e-11 73.2 106 43.4
arahy.Tifrunner.gnm1.ann1.M1XP5G Arachis hypogaea HOM05D001109 ORTHO05D001051 4.7e-11 71.2 106 46.2
arahy.Tifrunner.gnm1.ann1.FNM63F Arachis hypogaea HOM05D001109 ORTHO05D001051 8.1e-11 70.5 106 46.2
Ca_09452_v3 Cicer arietinum L. HOM05D001064 ORTHO05D000885 8.1e-11 70.5 94 45.7
ClCG11G010410 Citrullus lanatus HOM05D001109 ORTHO05D001051 1.1e-10 70.1 93 44.1
CsaV3_2G009950 Cucumis sativus L. HOM05D001109 ORTHO05D001051 1.4e-10 69.7 93 44.1
Sed0013569 Sechium edule HOM05D001109 ORTHO05D001051 3.1e-10 68.6 93 43.0
Glyma.19G247300 Glycine max HOM05D001109 ORTHO05D001051 5.2e-10 67.8 94 47.9
Glyma.03G249700 Glycine max HOM05D001109 ORTHO05D001051 1.5e-09 66.2 95 47.4
Psat0s3161g0120 Pisum sativum HOM05D001109 ORTHO05D001051 7.6e-09 63.9 98 45.9
Haze_04403 Corylus avellana HOM05D001109 ORTHO05D001051 3.8e-08 61.6 87 40.2
Manes.08G140600 Manihot esculenta HOM05D001109 ORTHO05D001051 1.1e-07 60.1 78 48.7
Phvul.006G104400 Phaseolus vulgaris HOM05D001109 ORTHO05D001051 3.2e-07 58.5 94 39.4
VMungo0540G1223 Vigna mungo HOM05D001109 ORTHO05D001051 3.2e-07 58.5 53 56.6
Cfa006376 Carpinus fangiana HOM05D001109 ORTHO05D001051 4.2e-07 58.2 87 37.9
TPR.G6909 Trifolium pratense HOM05D001109 ORTHO05D001051 5.4e-07 57.8 60 53.3
Potri.019G021300 Populus trichocarpa HOM05D001109 ORTHO05D001051 9.3e-07 57.0 71 47.9
Ciclev10033675m.g Citrus clementina HOM05D001109 ORTHO05D001051 1.6e-06 56.2 91 41.8
Sabra19G0032900 Salix brachista HOM05D001109 ORTHO05D001051 1.6e-06 56.2 71 47.9
CANSAT54G1943 Cannabis sativa HOM05D001109 ORTHO05D001051 2.1e-06 55.8 56 51.8
Lalb_Chr04g0262131 Lupinus albus HOM05D001109 ORTHO05D001051 3.5e-06 55.1 97 39.2
TWI32G0237 Tripterygium wilfordii HOM05D001109 ORTHO05D001051 3.5e-06 55.1 94 37.2
TWI34G0760 Tripterygium wilfordii HOM05D001109 ORTHO05D001051 6.0e-06 54.3 93 34.4
Duzib151G0667 Durio zibethinus HOM05D001109 ORTHO05D001051 7.8e-06 53.9 72 45.8
SHI14673 Sapria himalayana HOM05D001109 ORTHO05D001051 7.8e-06 53.9 93 38.7


User provided reference genes

Program Settings