Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34416 Trifolium pratense HOM05D000088 ORTHO05D000933 2.6e-29 131.3 64 100.0
Medtr1g113960 Medicago truncatula HOM05D000088 ORTHO05D000933 6.8e-22 106.7 64 82.8
Psat6g232840 Pisum sativum HOM05D000088 ORTHO05D000933 2.2e-20 101.7 64 75.0
Ca_03285_v3 Cicer arietinum L. HOM05D000088 ORTHO05D000933 1.4e-19 99.0 64 78.1
VMungo0720G2699 Vigna mungo HOM05D000088 ORTHO05D000933 7.8e-18 93.2 65 72.3
Phvul.007G016500 Phaseolus vulgaris HOM05D000088 ORTHO05D000933 1.5e-16 89.0 64 64.1
Glyma.10G284400 Glycine max HOM05D000088 ORTHO05D000933 4.3e-16 87.4 65 69.2
Glyma.20G105300 Glycine max HOM05D000088 ORTHO05D000933 2.8e-15 84.7 59 74.6
Lj5g0010767 Lotus japonicus HOM05D000088 ORTHO05D000933 3.4e-13 77.8 61 63.9
Lalb_Chr02g0143561 Lupinus albus HOM05D000088 ORTHO05D000933 3.4e-13 77.8 58 65.5
TWI79G0928 Tripterygium wilfordii HOM05D000088 ORTHO05D000933 9.8e-13 76.3 61 62.3
Sed0022547 Sechium edule HOM05D000088 ORTHO05D000933 1.3e-12 75.9 61 60.7
QL11p052619 Quercus lobata HOM05D000088 ORTHO05D000933 3.7e-12 74.3 68 57.4
GSVIVG01023958001 Vitis vinifera HOM05D000088 ORTHO05D000933 3.7e-12 74.3 61 60.7
CANSAT25G2472 Cannabis sativa HOM05D000088 ORTHO05D000933 8.3e-12 73.2 61 59.0
Cfa005309 Carpinus fangiana HOM05D000088 ORTHO05D000933 8.3e-12 73.2 61 62.3
Haze_02084 Corylus avellana HOM05D000088 ORTHO05D000933 8.3e-12 73.2 61 62.3
CsaV3_7G001310 Cucumis sativus L. HOM05D000088 ORTHO05D000933 1.9e-11 72.0 61 59.0
ClCG02G003830 Citrullus lanatus HOM05D000088 ORTHO05D000933 3.2e-11 71.2 61 59.0
Sed0026524 Sechium edule HOM05D000088 ORTHO05D000933 7.0e-11 70.1 58 56.9
Cpa.g.c31005 Carica papaya HOM05D000088 ORTHO05D000933 9.2e-11 69.7 61 59.0
RcHm_v2.0_Chr6g0279141 Rosa chinensis HOM05D000088 ORTHO05D000933 9.2e-11 69.7 63 55.6
Peaxi162Scf00362g00431 Petunia axillaris HOM05D000088 ORTHO05D000933 1.2e-10 69.3 61 55.7
Solyc10g055720.2 Solanum lycopersicum HOM05D000088 ORTHO05D000933 1.6e-10 68.9 61 55.7
PGSC0003DMG400018939 Solanum tuberosum HOM05D000088 ORTHO05D000933 1.6e-10 68.9 59 57.6
arahy.Tifrunner.gnm1.ann1.C913SB Arachis hypogaea HOM05D000088 ORTHO05D000933 2.0e-10 68.6 76 50.0
arahy.Tifrunner.gnm1.ann1.R2BN40 Arachis hypogaea HOM05D000088 ORTHO05D000933 2.0e-10 68.6 76 50.0
Rhsim11G0194500 Rhododendron simsii HOM05D000088 ORTHO05D000933 2.7e-10 68.2 61 55.7
Eucgr.I01464 Eucalyptus grandis HOM05D000088 ORTHO05D000933 3.5e-10 67.8 61 59.0
Nitab4.5_0004557g0020 Nicotiana tabacum HOM05D000088 ORTHO05D000933 3.5e-10 67.8 61 55.7
PSO541G2387 Papaver somniferum HOM05D000088 ORTHO05D000933 3.5e-10 67.8 61 60.7
Sopen10g025490 Solanum pennellii HOM05D000088 ORTHO05D000933 3.5e-10 67.8 61 54.1
FAN27G1420 Fragaria x ananassa HOM05D000088 ORTHO05D000933 4.6e-10 67.4 62 58.1
PSO170G5912 Papaver somniferum HOM05D000088 ORTHO05D000933 4.6e-10 67.4 61 60.7
PSO210G5714 Papaver somniferum HOM05D000088 ORTHO05D000933 4.6e-10 67.4 61 60.7
Dinv14137 Davidia involucrata HOM05D000088 ORTHO05D000933 6.0e-10 67.0 61 55.7
Thecc.02G053300 Theobroma cacao HOM05D000088 ORTHO05D000933 6.0e-10 67.0 61 55.7
CAN.G1354.1 Capsicum annuum HOM05D000088 ORTHO05D000933 1.0e-09 66.2 61 55.7
Dinv31902 Davidia involucrata HOM05D000088 ORTHO05D000933 1.0e-09 66.2 59 57.6
PSO675G8202 Papaver somniferum HOM05D000088 ORTHO05D000933 1.0e-09 66.2 61 59.0
CiPaw.06G119300 Carya illinoinensis HOM05D000088 ORTHO05D000933 1.3e-09 65.9 61 55.7
FAN15G0196 Fragaria x ananassa HOM05D000088 ORTHO05D000933 1.3e-09 65.9 62 56.5
FAN20G2450 Fragaria x ananassa HOM05D000088 ORTHO05D000933 1.3e-09 65.9 62 56.5
Nitab4.5_0003679g0060 Nicotiana tabacum HOM05D000088 ORTHO05D000933 1.7e-09 65.5 61 54.1
arahy.Tifrunner.gnm1.ann1.1H3LZD Arachis hypogaea HOM05D000088 ORTHO05D000933 2.3e-09 65.1 61 57.4
arahy.Tifrunner.gnm1.ann1.VJLL8K Arachis hypogaea HOM05D000088 ORTHO05D000933 2.3e-09 65.1 61 57.4
Duzib248G1399 Durio zibethinus HOM05D000088 ORTHO05D000933 3.9e-09 64.3 61 52.5
Lalb_Chr09g0321391 Lupinus albus HOM05D000088 ORTHO05D000933 3.9e-09 64.3 64 54.7
Hma1.2p1_2849F.1_g329360 Hydrangea macrophylla HOM05D000088 ORTHO05D000933 5.0e-09 63.9 59 54.2
Lj9A401T67 Lonicera japonica HOM05D000088 ORTHO05D000933 5.0e-09 63.9 61 54.1
PGR142G3015 Punica granatum HOM05D000088 ORTHO05D000933 5.0e-09 63.9 61 55.7
vmacro02298 Vaccinium macrocarpon HOM05D000088 ORTHO05D000933 5.0e-09 63.9 58 56.9
FAN24G0527 Fragaria x ananassa HOM05D000088 ORTHO05D000933 6.6e-09 63.5 62 54.8
Potri.009G139400 Populus trichocarpa HOM05D000088 ORTHO05D000933 6.6e-09 63.5 71 54.9
Sc08g0002680 Simmondsia chinensis HOM05D000088 ORTHO05D000933 8.6e-09 63.2 59 59.3
CSS0012010 Camellia sinensis var. sinensis HOM05D000088 ORTHO05D000933 1.1e-08 62.8 61 50.8
COL.COLO4_18012 Corchorus olitorius HOM05D000088 ORTHO05D000933 1.1e-08 62.8 61 52.5
Dinv41906 Davidia involucrata HOM05D000088 ORTHO05D000933 1.1e-08 62.8 61 52.5
Lj5A175T96 Lonicera japonica HOM05D000088 ORTHO05D000933 1.1e-08 62.8 62 51.6
Prupe.8G170600 Prunus persica HOM05D000088 ORTHO05D000933 1.1e-08 62.8 61 50.8
THA.LOC104807800 Tarenaya hassleriana HOM05D000088 ORTHO05D000933 1.1e-08 62.8 61 54.1
MD10G1130300 Malus domestica HOM05D000088 ORTHO05D000933 1.5e-08 62.4 61 52.5
Nitab4.5_0005590g0040 Nicotiana tabacum HOM05D000088 ORTHO05D285971 1.5e-08 62.4 61 52.5
Actinidia20537 Actinidia chinensis HOM05D000088 ORTHO05D000933 1.9e-08 62.0 58 53.4
Cpa.g.sc6.323 Carica papaya HOM05D000088 ORTHO05D000933 1.9e-08 62.0 62 56.5
Actinidia15466 Actinidia chinensis HOM05D000088 ORTHO05D000933 2.5e-08 61.6 59 54.2
Gohir.A01G171300 Gossypium hirsutum HOM05D000088 ORTHO05D000933 2.5e-08 61.6 64 50.0
MD10G1130100 Malus domestica HOM05D000088 ORTHO05D000933 2.5e-08 61.6 57 56.1
Oeu015550.1 Olea europaea HOM05D000088 ORTHO05D000933 2.5e-08 61.6 61 50.8
Sabra09G0108000 Salix brachista HOM05D000088 ORTHO05D000933 2.5e-08 61.6 70 52.9
Actinidia32026 Actinidia chinensis HOM05D000088 ORTHO05D000933 3.3e-08 61.2 58 53.4
ClCG10G000430 Citrullus lanatus HOM05D000088 ORTHO05D000933 4.3e-08 60.8 58 56.9
Hma1.2p1_2322F.1_g319870 Hydrangea macrophylla HOM05D000088 ORTHO05D000933 4.3e-08 60.8 59 52.5
Lj4A802G103 Lonicera japonica HOM05D000088 ORTHO05D000933 4.3e-08 60.8 59 52.5
Lalb_Chr06g0163821 Lupinus albus HOM05D000088 ORTHO05D000933 4.3e-08 60.8 61 49.2
MD15G1236700 Malus domestica HOM05D000088 ORTHO05D000933 4.3e-08 60.8 58 60.3
FAN26G2417 Fragaria x ananassa HOM05D000088 ORTHO05D000933 5.6e-08 60.5 58 56.9
MD02G1122500 Malus domestica HOM05D000088 ORTHO05D000933 5.6e-08 60.5 58 60.3
Potri.004G179514 Populus trichocarpa HOM05D000088 ORTHO05D000933 5.6e-08 60.5 74 47.3
RcHm_v2.0_Chr2g0098201 Rosa chinensis HOM05D000088 ORTHO05D000933 5.6e-08 60.5 58 55.2
Dinv40151 Davidia involucrata HOM05D000088 ORTHO05D000933 7.3e-08 60.1 61 52.5
Medtr5g023150 Medicago truncatula HOM05D000088 ORTHO05D000933 7.3e-08 60.1 61 55.7
Sabra04G0120700 Salix brachista HOM05D000088 ORTHO05D000933 7.3e-08 60.1 72 50.0
TPR.G25135 Trifolium pratense HOM05D000088 ORTHO05D000933 7.3e-08 60.1 61 57.4
CSS0023509 Camellia sinensis var. sinensis HOM05D000088 ORTHO05D000933 9.5e-08 59.7 59 55.9
Ca_24949_v3 Cicer arietinum L. HOM05D000088 ORTHO05D000933 9.5e-08 59.7 61 57.4
FAN19G2617 Fragaria x ananassa HOM05D000088 ORTHO05D000933 9.5e-08 59.7 58 56.9
Oeu045088.1 Olea europaea HOM05D000088 ORTHO05D000933 9.5e-08 59.7 61 49.2
Psat2g151440 Pisum sativum HOM05D000088 ORTHO05D000933 9.5e-08 59.7 61 57.4
Sed0019785 Sechium edule HOM05D000088 ORTHO05D000933 9.5e-08 59.7 58 58.6
CiPaw.05G086300 Carya illinoinensis HOM05D000088 ORTHO05D000933 1.2e-07 59.3 43 65.1
Duzib132G0900 Durio zibethinus HOM05D000088 ORTHO05D000933 1.2e-07 59.3 61 52.5
Gohir.D03G004800 Gossypium hirsutum HOM05D000088 ORTHO05D000933 1.2e-07 59.3 58 51.7
MBI08_g05537_MAGBIO Magnolia biondii HOM05D000088 ORTHO05D000933 1.2e-07 59.3 61 54.1
Manes.18G008800 Manihot esculenta HOM05D000088 ORTHO05D000933 1.2e-07 59.3 59 50.8
Aqoxy6G01913 Aquilegia oxysepala HOM05D000088 ORTHO05D000933 1.6e-07 58.9 61 52.5
Duzib264G0223 Durio zibethinus HOM05D000088 ORTHO05D000933 1.6e-07 58.9 58 53.4
FvH4_1g10940 Fragaria vesca HOM05D000088 ORTHO05D000933 1.6e-07 58.9 58 55.2
Gorai.002G201200 Gossypium raimondii HOM05D000088 ORTHO05D000933 1.6e-07 58.9 61 50.8
MELO3C013739.2 Cucumis melo HOM05D000088 ORTHO05D000933 2.1e-07 58.5 58 55.2
CsaV3_3G000460 Cucumis sativus L. HOM05D000088 ORTHO05D000933 2.1e-07 58.5 58 55.2
Migut.B00043 Erythranthe guttata HOM05D000088 ORTHO05D000933 2.1e-07 58.5 61 49.2
Glyma.11G082200 Glycine max HOM05D000088 ORTHO05D000933 2.1e-07 58.5 61 54.1
Gohir.A02G175000 Gossypium hirsutum HOM05D000088 ORTHO05D000933 2.1e-07 58.5 58 51.7
Gorai.003G005100 Gossypium raimondii HOM05D000088 ORTHO05D000933 2.1e-07 58.5 58 51.7
Nitab4.5_0001696g0100 Nicotiana tabacum HOM05D000088 ORTHO05D000933 2.1e-07 58.5 61 50.8
Nitab4.5_0007439g0030 Nicotiana tabacum HOM05D000088 ORTHO05D000933 2.1e-07 58.5 61 50.8
VMungo1215G1536 Vigna mungo HOM05D000088 ORTHO05D000933 2.1e-07 58.5 61 54.1
Actinidia18029 Actinidia chinensis HOM05D000088 ORTHO05D000933 2.8e-07 58.2 61 49.2
ATR0661G340 Amborella trichopoda HOM05D000088 ORTHO05D000933 2.8e-07 58.2 61 54.1
CAN.G588.110 Capsicum annuum HOM05D000088 ORTHO05D000933 2.8e-07 58.2 62 51.6
ECA233G2291 Erigeron canadensis HOM05D000088 ORTHO05D000933 2.8e-07 58.2 67 55.2
FAN23G0344 Fragaria x ananassa HOM05D000088 ORTHO05D000933 2.8e-07 58.2 58 55.2
Gohir.D01G162300 Gossypium hirsutum HOM05D000088 ORTHO05D000933 2.8e-07 58.2 61 50.8
Lj2g0012804 Lotus japonicus HOM05D000088 ORTHO05D000933 2.8e-07 58.2 61 55.7
Potri.007G060600 Populus trichocarpa HOM05D000088 ORTHO05D000933 2.8e-07 58.2 58 50.0
SalBow1G0796 Salvia bowleyana HOM05D000088 ORTHO05D000933 2.8e-07 58.2 61 49.2
GSVIVG01004567001 Vitis vinifera HOM05D000088 ORTHO05D000933 2.8e-07 58.2 61 54.1
Lsat_1_v5_gn_3_70620 Lactuca sativa HOM05D000088 ORTHO05D000933 3.6e-07 57.8 61 49.2
Peaxi162Scf00042g01210 Petunia axillaris HOM05D000088 ORTHO05D000933 3.6e-07 57.8 62 50.0
Cc07_g11410 Coffea canephora HOM05D000088 ORTHO05D000933 4.7e-07 57.4 61 49.2
Prupe.7G176000 Prunus persica HOM05D000088 ORTHO05D000933 4.7e-07 57.4 58 58.6
Sabra05G0087100 Salix brachista HOM05D000088 ORTHO05D000933 4.7e-07 57.4 58 48.3
SGA_v2.0_scaffold58G20335 Striga asiatica HOM05D000088 ORTHO05D000933 4.7e-07 57.4 61 50.8
Hma1.2p1_0315F.1_g122660 Hydrangea macrophylla HOM05D000088 ORTHO05D000933 6.2e-07 57.0 59 50.8
THA.LOC104824751 Tarenaya hassleriana HOM05D000088 ORTHO05D000933 6.2e-07 57.0 64 50.0
Duzib052G0626 Durio zibethinus HOM05D000088 ORTHO05D000933 8.1e-07 56.6 61 47.5
Gohir.A04G132100 Gossypium hirsutum HOM05D000088 ORTHO05D000933 8.1e-07 56.6 57 52.6
Gohir.D04G168700 Gossypium hirsutum HOM05D000088 ORTHO05D000933 8.1e-07 56.6 57 52.6
Gorai.012G157000 Gossypium raimondii HOM05D000088 ORTHO05D000933 8.1e-07 56.6 57 52.6
MD05G1126800 Malus domestica HOM05D000088 ORTHO05D000933 8.1e-07 56.6 62 54.8
Actinidia22933 Actinidia chinensis HOM05D000088 ORTHO05D000933 1.1e-06 56.2 61 47.5
Lj4C227T3 Lonicera japonica HOM05D000088 ORTHO05D000933 1.1e-06 56.2 58 51.7
HanXRQChr12g0374591 Helianthus annuus HOM05D000088 ORTHO05D000933 1.4e-06 55.8 64 53.1
Lalb_Chr16g0377311 Lupinus albus HOM05D000088 ORTHO05D000933 1.4e-06 55.8 61 52.5
Nn6g31880 Nelumbo nucifera HOM05D000088 ORTHO05D000933 1.8e-06 55.5 61 50.8
Phvul.002G112500 Phaseolus vulgaris HOM05D000088 ORTHO05D000933 1.8e-06 55.5 61 52.5
ECA246G0459 Erigeron canadensis HOM05D000088 ORTHO05D000933 2.3e-06 55.1 61 45.9
Glyma.01G161600 Glycine max HOM05D000088 ORTHO05D000933 2.3e-06 55.1 61 50.8
Aqoxy5G01082 Aquilegia oxysepala HOM05D000088 ORTHO05D000933 3.1e-06 54.7 61 49.2
FAN28G0519 Fragaria x ananassa HOM05D000088 ORTHO05D000933 3.1e-06 54.7 58 51.7
Nitab4.5_0005338g0010 Nicotiana tabacum HOM05D000088 ORTHO05D000933 3.1e-06 54.7 61 47.5
PGSC0003DMG400018644 Solanum tuberosum HOM05D000088 ORTHO05D000933 3.1e-06 54.7 62 50.0
HanXRQChr10g0300331 Helianthus annuus HOM05D000088 ORTHO05D000933 4.0e-06 54.3 67 46.3
SGA_v2.0_scaffold32G13317 Striga asiatica HOM05D000088 ORTHO05D000933 4.0e-06 54.3 61 44.3
Atru.chr3.923 Acer truncatum HOM05D000088 ORTHO05D000933 5.2e-06 53.9 61 50.8
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 5.2e-06 53.9 58 48.3
Eucgr.I02291 Eucalyptus grandis HOM05D000088 ORTHO05D000933 5.2e-06 53.9 63 52.4
Hma1.2p1_0552F.1_g177690 Hydrangea macrophylla HOM05D000088 ORTHO05D000933 5.2e-06 53.9 61 49.2
Lsat_1_v5_gn_8_122461 Lactuca sativa HOM05D000088 ORTHO05D000933 5.2e-06 53.9 66 50.0
Manes.01G151700 Manihot esculenta HOM05D000088 ORTHO05D000933 5.2e-06 53.9 58 51.7
Actinidia24618 Actinidia chinensis HOM05D000088 ORTHO05D000933 6.8e-06 53.5 58 50.0
MSTRG.19966 Avicennia marina HOM05D000088 ORTHO05D000933 6.8e-06 53.5 61 49.2
DCAR_003195 Daucus carota HOM05D000088 ORTHO05D000933 6.8e-06 53.5 61 49.2
Sopen01g053920 Solanum pennellii HOM05D000088 ORTHO05D000933 6.8e-06 53.5 62 48.4
vmacro20500 Vaccinium macrocarpon HOM05D000088 ORTHO05D000933 6.8e-06 53.5 58 46.6
TWI09G0427 Tripterygium wilfordii HOM05D000088 ORTHO05D000933 8.9e-06 53.1 58 50.0


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