Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 5.0e-74 281.2 159 100.0
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 6.5e-66 254.2 159 93.7
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 1.2e-54 216.9 159 82.4
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 1.5e-54 216.5 159 83.0
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.7e-53 213.0 159 82.4
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 1.1e-52 210.3 157 81.5
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 3.3e-49 198.7 197 66.0
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 1.8e-47 193.0 157 77.7
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 6.8e-47 191.0 153 77.8
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 2.0e-46 189.5 152 77.6
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 2.0e-46 189.5 160 72.5
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 3.4e-46 188.7 159 73.6
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 9.8e-46 187.2 161 73.9
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.3e-45 186.8 167 71.9
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 1.7e-45 186.4 160 71.9
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 2.9e-45 185.7 161 74.5
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 8.3e-45 184.1 157 75.2
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 1.1e-44 183.7 161 73.3
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 1.4e-44 183.3 147 76.2
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 1.9e-44 183.0 157 74.5
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 4.1e-44 181.8 155 73.5
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 4.1e-44 181.8 158 71.5
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 1.2e-43 180.3 156 73.1
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 2.7e-43 179.1 165 68.5
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 4.6e-43 178.3 160 71.9
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 4.6e-43 178.3 146 74.7
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 6.0e-43 177.9 157 73.9
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 6.0e-43 177.9 161 71.4
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 7.8e-43 177.6 163 73.0
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 7.8e-43 177.6 146 75.3
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 1.3e-42 176.8 162 71.0
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.7e-42 176.4 154 71.4
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 2.3e-42 176.0 152 68.4
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 2.3e-42 176.0 159 69.8
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 2.3e-42 176.0 155 71.6
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 3.0e-42 175.6 166 69.3
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 3.9e-42 175.3 149 74.5
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 5.0e-42 174.9 154 72.1
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 6.6e-42 174.5 157 66.9
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 6.6e-42 174.5 157 66.9
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 8.6e-42 174.1 154 72.7
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 1.1e-41 173.7 152 68.4
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.1e-41 173.7 160 67.5
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 1.1e-41 173.7 154 72.1
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 2.5e-41 172.6 160 69.4
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 3.3e-41 172.2 157 66.2
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 4.3e-41 171.8 153 70.6
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 5.6e-41 171.4 157 65.6
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 7.3e-41 171.0 189 52.4
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 1.2e-40 170.2 152 72.4
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.6e-40 169.9 168 66.7
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.6e-40 169.9 160 67.5
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 3.6e-40 168.7 152 70.4
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 4.7e-40 168.3 146 74.0
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 4.7e-40 168.3 152 72.4
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 4.7e-40 168.3 151 70.9
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.1e-39 167.2 143 74.1
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.1e-39 167.2 150 72.0
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 1.4e-39 166.8 150 70.0
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 1.4e-39 166.8 156 69.2
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.8e-39 166.4 155 68.4
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 1.8e-39 166.4 155 70.3
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 1.8e-39 166.4 151 72.2
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 2.3e-39 166.0 154 75.3
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 6.8e-39 164.5 152 68.4
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 6.8e-39 164.5 154 70.8
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.2e-38 163.7 151 70.9
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 1.2e-38 163.7 150 72.7
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 1.5e-38 163.3 145 69.7
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 3.4e-38 162.2 160 66.9
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 3.4e-38 162.2 161 68.9
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 3.4e-38 162.2 196 57.1
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 1.3e-37 160.2 133 74.4
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.7e-37 159.8 119 79.0
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 2.2e-37 159.5 154 67.5
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 2.9e-37 159.1 146 73.3
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 2.9e-37 159.1 118 78.0
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 4.9e-37 158.3 146 71.9
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 1.9e-36 156.4 154 67.5
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 2.4e-36 156.0 148 67.6
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 5.4e-36 154.8 155 65.2
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 2.1e-35 152.9 115 74.8
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 2.1e-35 152.9 148 66.9
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 2.7e-35 152.5 146 67.1
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 2.7e-35 152.5 136 69.9
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 2.7e-35 152.5 153 66.0
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 4.6e-35 151.8 153 66.0
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 6.0e-35 151.4 153 66.7
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.5e-33 146.7 115 71.3
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.3e-33 145.6 115 72.2
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 2.0e-30 136.3 144 63.2
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 3.4e-30 135.6 156 58.3
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 3.7e-29 132.1 151 54.3
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 4.1e-28 128.6 186 46.8
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 1.2e-27 127.1 171 48.5
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 3.5e-27 125.6 100 64.0
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 2.3e-26 122.9 110 66.4
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 3.9e-26 122.1 156 57.1
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.6e-24 116.7 150 48.0
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.2e-22 110.5 129 51.9
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 4.4e-22 108.6 103 57.3
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 8.4e-21 104.4 155 50.3
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 3.2e-20 102.4 91 60.4
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 1.9e-12 76.6 60 60.0
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 3.2e-12 75.9 95 49.5
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 9.3e-12 74.3 96 42.7
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 3.9e-10 68.9 89 50.6
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 5.6e-09 65.1 109 44.0
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 2.0e-06 56.6 61 52.5


User provided reference genes

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