Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 2.7e-141 505.4 260 100.0
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 1.0e-124 450.3 265 89.4
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 1.9e-102 376.3 262 77.5
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 1.8e-97 359.8 260 75.8
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 2.6e-96 355.9 267 73.8
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 1.3e-90 337.0 273 68.5
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 2.4e-89 332.8 269 69.9
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 9.0e-89 330.9 276 68.1
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 1.5e-88 330.1 274 69.0
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 7.6e-88 327.8 270 67.8
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 9.9e-88 327.4 270 71.1
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 2.9e-87 325.9 267 70.0
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 2.3e-84 316.2 262 66.8
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 4.3e-83 312.0 267 67.8
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 1.3e-82 310.5 269 66.9
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 1.1e-81 307.4 270 65.6
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 1.8e-81 306.6 269 65.8
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 5.3e-81 305.1 271 64.9
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.0e-80 303.1 269 64.7
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.0e-79 300.8 267 65.2
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 3.8e-79 298.9 272 64.3
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 2.5e-78 296.2 279 62.0
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 1.6e-77 293.5 266 61.3
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 7.9e-77 291.2 215 71.6
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.0e-76 290.8 272 61.4
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 3.9e-76 288.9 264 63.3
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 1.5e-75 287.0 213 68.5
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 5.7e-75 285.0 193 72.0
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 2.1e-74 283.1 230 65.2
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 6.3e-74 281.6 229 64.6
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.1e-73 280.8 230 66.1
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 6.9e-73 278.1 273 56.8
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 3.4e-72 275.8 269 60.2
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 7.6e-72 274.6 269 60.2
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 7.6e-72 274.6 247 64.4
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 1.3e-71 273.9 265 60.4
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 5.0e-71 271.9 197 67.5
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.5e-71 271.6 190 69.5
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.5e-71 271.6 190 69.5
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 6.5e-71 271.6 190 69.5
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 8.5e-71 271.2 239 62.3
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 1.4e-70 270.4 266 57.5
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 1.9e-70 270.0 260 59.6
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 1.9e-70 270.0 247 62.3
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 1.6e-69 266.9 267 59.9
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 1.6e-69 266.9 267 59.9
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 2.1e-69 266.5 284 55.6
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 2.7e-69 266.2 183 70.5
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 4.6e-69 265.4 244 59.8
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 7.9e-69 264.6 267 56.6
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 7.9e-69 264.6 227 69.6
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 3.0e-68 262.7 186 71.5
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 6.7e-68 261.5 279 54.1
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.1e-67 260.8 261 57.9
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 1.9e-67 260.0 271 56.8
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 2.5e-67 259.6 265 56.2
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 7.4e-67 258.1 272 56.2
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 1.3e-66 257.3 187 68.4
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 2.2e-66 256.5 265 55.8
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 3.7e-66 255.8 179 72.1
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.3e-66 255.0 263 57.8
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 1.1e-65 254.2 229 63.3
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 1.4e-65 253.8 267 55.8
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 6.9e-65 251.5 302 50.0
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 2.0e-64 250.0 240 55.8
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 1.0e-63 247.7 190 66.3
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 1.7e-63 246.9 270 55.2
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 2.2e-63 246.5 268 55.6
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 5.0e-63 245.4 264 54.5
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 6.5e-63 245.0 200 62.5
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 6.5e-63 245.0 276 56.2
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 1.6e-61 240.4 275 56.7
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 2.7e-61 239.6 217 60.4
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 2.7e-61 239.6 192 62.5
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 4.6e-61 238.8 281 52.7
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 4.6e-61 238.8 276 54.0
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 6.1e-61 238.4 264 55.3
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 1.8e-60 236.9 260 53.5
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 2.3e-60 236.5 285 50.9
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 2.0e-59 233.4 262 51.9
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 2.6e-59 233.0 258 53.1
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 2.6e-59 233.0 265 52.5
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 5.7e-59 231.9 268 50.7
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 9.7e-59 231.1 190 58.9
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 2.2e-58 229.9 262 51.5
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 3.7e-58 229.2 220 56.8
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 3.7e-58 229.2 202 62.9
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 3.7e-58 229.2 249 55.4
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 4.8e-58 228.8 262 51.5
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 2.0e-56 223.4 266 51.1
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 2.0e-56 223.4 266 51.1
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 2.0e-56 223.4 266 51.1
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 2.6e-56 223.0 264 51.5
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 1.0e-55 221.1 270 50.7
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 2.2e-55 219.9 269 51.3
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 2.9e-55 219.5 272 50.4
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 3.8e-55 219.2 209 56.9
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 5.0e-55 218.8 268 51.1
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 6.5e-55 218.4 264 50.4
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 6.5e-55 218.4 268 50.7
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 6.5e-55 218.4 253 55.7
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 8.5e-55 218.0 268 50.0
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 1.1e-54 217.6 263 49.4
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 1.1e-54 217.6 261 51.3
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 5.5e-54 215.3 268 50.4
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 9.4e-54 214.5 266 48.5
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 3.6e-53 212.6 271 49.1
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 1.4e-52 210.7 271 50.2
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 1.7e-50 203.8 149 63.8
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 3.3e-43 179.5 175 50.9
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 7.5e-43 178.3 160 55.0
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 1.7e-42 177.2 267 46.1
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 2.8e-42 176.4 160 54.4
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 5.3e-41 172.2 136 59.6
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 7.0e-41 171.8 180 48.9
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 1.5e-38 164.1 186 47.8
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 8.8e-36 154.8 175 47.4
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 4.5e-32 142.5 239 37.7
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 7.2e-30 135.2 164 44.5
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 1.6e-29 134.0 110 59.1
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 2.2e-26 123.6 109 59.6
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 8.3e-26 121.7 226 36.7


User provided reference genes

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