Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 4.2e-136 488.0 250 100.0
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.2e-129 465.7 250 94.0
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 3.2e-128 461.8 250 94.0
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 3.0e-126 455.3 250 92.8
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 6.3e-124 447.6 250 90.0
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 1.2e-122 443.4 250 88.4
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 4.5e-122 441.4 250 89.2
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.7e-121 439.5 250 89.2
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.7e-121 439.5 250 88.4
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 4.0e-118 428.3 251 87.6
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 4.0e-118 428.3 251 87.6
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 1.9e-112 409.5 250 83.2
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 2.5e-112 409.1 245 83.3
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 3.3e-112 408.7 250 80.0
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 5.6e-112 407.9 242 81.8
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 5.6e-112 407.9 241 83.4
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 2.1e-111 406.0 242 82.2
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 2.1e-111 406.0 250 79.6
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 2.8e-111 405.6 242 81.0
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 4.7e-111 404.8 242 82.6
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 8.0e-111 404.1 245 80.8
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 3.1e-110 402.1 245 81.6
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 5.2e-110 401.4 242 81.8
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.5e-109 399.8 245 80.8
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 1.5e-109 399.8 242 81.0
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.4e-109 398.3 242 79.8
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.3e-108 396.7 242 79.3
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.3e-108 396.7 242 79.8
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 3.7e-108 395.2 242 80.2
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 6.4e-108 394.4 245 78.8
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 8.3e-108 394.0 240 81.2
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 8.3e-108 394.0 242 80.2
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.1e-107 393.7 246 78.0
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 4.1e-107 391.7 242 79.8
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 2.7e-106 389.0 245 77.6
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 2.7e-106 389.0 245 78.0
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 2.7e-106 389.0 257 76.3
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.7e-105 386.3 245 77.6
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.3e-105 386.0 245 75.9
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 3.9e-105 385.2 245 78.0
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 5.0e-105 384.8 242 77.7
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 2.5e-104 382.5 242 75.2
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 2.5e-104 382.5 242 75.2
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 2.5e-104 382.5 245 74.7
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 1.6e-103 379.8 242 74.4
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.6e-103 379.8 252 75.8
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 2.1e-103 379.4 242 74.0
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.1e-103 379.4 245 74.7
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.6e-103 378.6 242 76.4
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.4e-102 376.7 250 74.0
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 2.3e-102 375.9 241 73.4
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 4.0e-102 375.2 245 72.2
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 1.2e-101 373.6 242 73.6
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 1.2e-101 373.6 242 73.6
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 1.2e-101 373.6 242 73.6
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.2e-101 373.6 249 73.9
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 1.2e-101 373.6 242 74.4
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 1.5e-101 373.2 242 73.6
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.5e-101 373.2 242 72.7
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 2.0e-101 372.9 250 73.2
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 2.0e-101 372.9 245 72.7
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 2.6e-101 372.5 242 73.6
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 4.4e-101 371.7 245 75.5
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 4.4e-101 371.7 243 75.7
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 9.8e-101 370.5 242 73.6
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 2.9e-100 369.0 246 74.4
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 8.3e-100 367.5 241 74.7
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 1.4e-99 366.7 262 69.1
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 2.4e-99 365.9 241 73.9
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 3.2e-99 365.5 245 72.7
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 9.2e-99 364.0 242 72.7
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 6.0e-98 361.3 241 73.0
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 8.6e-97 357.5 244 68.4
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 2.8e-95 352.4 242 70.7
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.1e-94 350.5 234 73.5
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 1.8e-94 349.7 247 70.9
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 3.4e-93 345.5 203 83.3
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 3.4e-93 345.5 245 68.6
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 3.8e-92 342.0 208 82.7
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 7.1e-91 337.8 245 68.6
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 7.1e-91 337.8 242 67.8
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.6e-90 336.7 242 69.0
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.1e-90 336.3 242 69.0
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 7.8e-90 334.3 208 79.3
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.0e-89 334.0 245 66.1
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 2.3e-89 332.8 242 65.7
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 3.0e-89 332.4 213 79.3
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 3.6e-87 325.5 207 76.8
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 3.4e-85 318.9 250 62.0
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 9.9e-85 317.4 248 65.3
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 1.1e-83 313.9 184 83.7
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 2.4e-83 312.8 198 72.7
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.9e-80 303.1 202 77.2
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 1.9e-80 303.1 242 65.7
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 3.8e-76 288.9 191 68.6
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.4e-75 286.2 258 64.0
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.6e-74 283.5 245 62.4
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 3.3e-72 275.8 242 60.3
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.2e-66 257.3 249 50.2
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 3.9e-65 252.3 242 51.2
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 1.8e-62 243.4 238 52.1
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 6.5e-60 235.0 242 47.5
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 6.5e-60 235.0 239 49.8
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 1.0e-57 227.6 153 69.9
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 3.3e-56 222.6 202 60.9
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 5.1e-49 198.7 153 60.8
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 4.8e-47 192.2 180 57.8
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 3.1e-46 189.5 158 62.0
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 5.3e-46 188.7 149 61.1
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.5e-45 187.2 151 62.3
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 2.2e-44 183.3 121 74.4
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 7.2e-43 178.3 110 78.2
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 3.9e-33 146.0 119 62.2
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 8.8e-33 144.8 91 75.8
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 7.4e-32 141.7 92 75.0
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 1.6e-29 134.0 90 70.0
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 1.3e-28 131.0 232 35.8
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.7e-15 87.4 71 57.7
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.7e-15 87.4 166 42.2
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 5.4e-14 82.4 230 26.5
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 2.8e-07 60.1 40 57.5
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 4.9e-07 59.3 38 78.9


User provided reference genes

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