Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 1.4e-69 266.2 133 100.0
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 9.4e-58 226.9 129 86.0
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 1.5e-55 219.5 133 80.5
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 1.4e-40 169.9 133 68.4
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 4.5e-36 154.8 131 61.8
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 1.4e-32 143.3 129 61.2
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 1.5e-31 139.8 134 56.7
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 4.5e-28 128.3 135 56.3
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 3.8e-27 125.2 147 51.7
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 8.5e-27 124.0 129 49.6
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 1.5e-26 123.2 125 53.6
arahy.Tifrunner.gnm1.ann1.9K6AGR Arachis hypogaea HOM05D009134 ORTHO05D011284 1.6e-25 119.8 137 50.4
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 6.1e-25 117.9 134 50.0
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 2.0e-23 112.8 133 45.1
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 2.2e-22 109.4 134 45.5
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 2.0e-20 102.8 87 54.0
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 2.3e-19 99.4 138 46.4
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 2.3e-19 99.4 133 42.9
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 5.0e-19 98.2 107 43.9
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 9.5e-18 94.0 141 40.4
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 3.6e-17 92.0 88 51.1
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 1.4e-16 90.1 87 51.7
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 1.8e-16 89.7 87 50.6
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 3.0e-16 89.0 89 51.7
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 4.4e-15 85.1 86 48.8
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 2.8e-14 82.4 129 40.3
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 1.1e-13 80.5 80 50.0
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 2.4e-13 79.3 110 42.7
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 3.2e-13 79.0 101 46.5
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 5.4e-13 78.2 134 41.0
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 3.5e-12 75.5 134 39.6
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 8.6e-11 70.9 80 42.5
Sc07g0007160 Simmondsia chinensis HOM05D009134 ORTHO05D011284 8.6e-11 70.9 119 36.1
Nn7g37605 Nelumbo nucifera HOM05D009134 ORTHO05D011284 4.7e-09 65.1 124 40.3


User provided reference genes

Program Settings