Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34185 Trifolium pratense HOM05D006282 ORTHO05D007460 3.3e-37 157.9 82 100.0
TPR.G34221 Trifolium pratense HOM05D006282 ORTHO05D007460 7.3e-37 156.8 82 98.8
Medtr4g068220 Medicago truncatula HOM05D006282 ORTHO05D007460 4.2e-32 141.0 83 91.6
Glyma.12G049300 Glycine max HOM05D006282 ORTHO05D007460 8.4e-17 90.1 85 61.2
Glyma.11G124700 Glycine max HOM05D006282 ORTHO05D007460 2.5e-16 88.6 85 62.4
Phvul.011G051600 Phaseolus vulgaris HOM05D006282 ORTHO05D007460 2.5e-16 88.6 85 60.0
Lalb_Chr08g0233621 Lupinus albus HOM05D006282 ORTHO05D007460 6.7e-14 80.5 82 58.5
Lalb_Chr11g0073031 Lupinus albus HOM05D006282 ORTHO05D007460 6.7e-14 80.5 80 60.0
arahy.Tifrunner.gnm1.ann1.RU422H Arachis hypogaea HOM05D006282 ORTHO05D007460 1.5e-13 79.3 84 60.7
Hma1.2p1_0324F.1_g125760 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.2e-10 69.7 71 54.9
arahy.Tifrunner.gnm1.ann1.HGL526 Arachis hypogaea HOM05D006282 ORTHO05D007460 2.0e-10 68.9 67 61.2
CiPaw.02G102600 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.3e-09 66.2 84 56.0
Hma1.2p1_0807F.1_g221500 Hydrangea macrophylla HOM05D006282 ORTHO05D007460 1.3e-09 66.2 72 51.4
CiPaw.02G102700 Carya illinoinensis HOM05D006282 ORTHO05D007460 1.7e-09 65.9 85 49.4
CiPaw.01G172500 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.2e-09 65.5 76 50.0
Gorai.011G137600 Gossypium raimondii HOM05D006282 ORTHO05D007460 2.9e-09 65.1 71 49.3
CiPaw.01G172100 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.0e-09 64.3 76 47.4
CiPaw.01G172600 Carya illinoinensis HOM05D006282 ORTHO05D007460 5.0e-09 64.3 76 47.4
Gohir.A10G142000 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.0e-09 64.3 71 49.3
TWI63G0935 Tripterygium wilfordii HOM05D006282 ORTHO05D007460 5.0e-09 64.3 84 48.8
Gohir.D10G124500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 6.5e-09 63.9 71 49.3
Manes.04G048673 Manihot esculenta HOM05D006282 ORTHO05D007460 6.5e-09 63.9 71 50.7
QL10p052996 Quercus lobata HOM05D006282 ORTHO05D007460 1.4e-08 62.8 69 50.7
Oeu016604.1 Olea europaea HOM05D006282 ORTHO05D007460 1.9e-08 62.4 71 47.9
Thecc.04G169300 Theobroma cacao HOM05D006282 ORTHO05D007460 2.5e-08 62.0 71 50.7
Thecc.04G169400 Theobroma cacao HOM05D006282 ORTHO05D007460 2.5e-08 62.0 82 48.8
Gohir.D10G124600 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.2e-08 61.6 71 50.7
Gorai.011G137700 Gossypium raimondii HOM05D006282 ORTHO05D007460 3.2e-08 61.6 71 50.7
CiPaw.01G172200 Carya illinoinensis HOM05D006282 ORTHO05D007460 4.2e-08 61.2 76 46.1
CsaV3_4G002680 Cucumis sativus L. HOM05D006282 ORTHO05D007460 4.2e-08 61.2 75 50.7
Manes.04G047561 Manihot esculenta HOM05D006282 ORTHO05D007460 4.2e-08 61.2 71 49.3
QL10p052968 Quercus lobata HOM05D006282 ORTHO05D007460 4.2e-08 61.2 67 44.8
Gohir.A10G141900 Gossypium hirsutum HOM05D006282 ORTHO05D007460 5.5e-08 60.8 71 49.3
CiPaw.02G102800 Carya illinoinensis HOM05D006282 ORTHO05D007460 7.1e-08 60.5 85 50.6
Oeu016605.1 Olea europaea HOM05D006282 ORTHO05D007460 7.1e-08 60.5 71 46.5
Oeu020810.1 Olea europaea HOM05D006282 ORTHO05D007460 7.1e-08 60.5 71 45.1
QL10p052979 Quercus lobata HOM05D006282 ORTHO05D007460 7.1e-08 60.5 67 44.8
Manes.04G046449 Manihot esculenta HOM05D006282 ORTHO05D007460 9.3e-08 60.1 71 49.3
Oeu023771.1 Olea europaea HOM05D006282 ORTHO05D007460 9.3e-08 60.1 68 47.1
Sed0024901 Sechium edule HOM05D006282 ORTHO05D007460 9.3e-08 60.1 75 50.7
Gorai.005G124500 Gossypium raimondii HOM05D006282 ORTHO05D007460 1.2e-07 59.7 72 51.4
Manes.11G128100 Manihot esculenta HOM05D006282 ORTHO05D007460 1.2e-07 59.7 78 46.2
Nn1g09678 Nelumbo nucifera HOM05D006282 ORTHO05D007460 1.2e-07 59.7 70 52.9
Prupe.1G203400 Prunus persica HOM05D006282 ORTHO05D007460 1.2e-07 59.7 79 49.4
QL10p053002 Quercus lobata HOM05D006282 ORTHO05D007460 1.2e-07 59.7 67 44.8
PGSC0003DMG400006400 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.2e-07 59.7 70 48.6
Atru.chr4.1364 Acer truncatum HOM05D006282 ORTHO05D007460 1.6e-07 59.3 69 53.6
Ciclev10023163m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.6e-07 59.3 76 50.0
Solyc04g076730.1 Solanum lycopersicum HOM05D006282 ORTHO05D007460 1.6e-07 59.3 71 47.9
Sopen04g030460 Solanum pennellii HOM05D006282 ORTHO05D007460 1.6e-07 59.3 71 47.9
CiPaw.01G172700 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.1e-07 58.9 73 47.9
Manes.04G045337 Manihot esculenta HOM05D006282 ORTHO05D007460 2.1e-07 58.9 71 50.7
Cfa015249 Carpinus fangiana HOM05D006282 ORTHO05D007460 2.7e-07 58.5 69 49.3
CiPaw.01G172000 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.7e-07 58.5 72 51.4
CiPaw.01G172400 Carya illinoinensis HOM05D006282 ORTHO05D007460 2.7e-07 58.5 72 51.4
Cfa015244 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.5e-07 58.2 69 49.3
MELO3C017773.2 Cucumis melo HOM05D006282 ORTHO05D007460 3.5e-07 58.2 75 49.3
Gohir.A02G091500 Gossypium hirsutum HOM05D006282 ORTHO05D007460 3.5e-07 58.2 72 50.0
Cfa015245 Carpinus fangiana HOM05D006282 ORTHO05D007460 4.6e-07 57.8 70 50.0
Oeu034174.1 Olea europaea HOM05D006282 ORTHO05D007460 4.6e-07 57.8 71 45.1
Prupe.1G203300 Prunus persica HOM05D006282 ORTHO05D007460 4.6e-07 57.8 81 48.1
COL.COLO4_10135 Corchorus olitorius HOM05D006282 ORTHO05D007460 6.1e-07 57.4 74 51.4
Gohir.D02G109100 Gossypium hirsutum HOM05D006282 ORTHO05D007460 7.9e-07 57.0 76 44.7
Cfa015251 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-06 56.6 71 53.5
Cfa015254 Carpinus fangiana HOM05D006282 ORTHO05D007460 1.0e-06 56.6 68 45.6
Ciclev10023861m.g Citrus clementina HOM05D006282 ORTHO05D007460 1.0e-06 56.6 74 45.9
QL10p052970 Quercus lobata HOM05D006282 ORTHO05D007460 1.0e-06 56.6 74 47.3
Potri.016G099600 Populus trichocarpa HOM05D006282 ORTHO05D007460 1.3e-06 56.2 70 48.6
PGSC0003DMG400014649 Solanum tuberosum HOM05D006282 ORTHO05D007460 1.8e-06 55.8 76 44.7
Migut.N03076 Erythranthe guttata HOM05D006282 ORTHO05D007460 2.3e-06 55.5 72 48.6
MBI07_g38403_MAGBIO Magnolia biondii HOM05D006282 ORTHO05D007460 2.3e-06 55.5 70 50.0
QL10p052886 Quercus lobata HOM05D006282 ORTHO05D007460 3.0e-06 55.1 70 47.1
Cfa015231 Carpinus fangiana HOM05D006282 ORTHO05D007460 3.9e-06 54.7 69 47.8
Cc00_g15290 Coffea canephora HOM05D006282 ORTHO05D007460 3.9e-06 54.7 84 45.2
QL10p053030 Quercus lobata HOM05D006282 ORTHO05D007460 5.1e-06 54.3 64 43.8
Sopen08g004950 Solanum pennellii HOM05D006282 ORTHO05D007460 5.1e-06 54.3 72 48.6
CiPaw.01G033300 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.7e-06 53.9 83 49.4
CiPaw.05G255000 Carya illinoinensis HOM05D006282 ORTHO05D007460 6.7e-06 53.9 70 48.6


User provided reference genes

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