Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34183 Trifolium pratense HOM05D006730 ORTHO05D008189 0.0e+00 1321.6 687 100.0
Psat7g208760 Pisum sativum HOM05D006730 ORTHO05D008189 2.8e-254 882.1 698 71.3
Medtr4g068005 Medicago truncatula HOM05D006730 ORTHO05D008189 8.3e-243 844.0 686 68.8
Ca_03751_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 1.2e-241 840.1 700 68.9
Ca_07546_v3 Cicer arietinum L. HOM05D006730 ORTHO05D008189 2.2e-227 792.7 662 68.3
Glyma.12G050000 Glycine max HOM05D006730 ORTHO05D008189 4.6e-193 678.7 703 56.0
Phvul.011G201600 Phaseolus vulgaris HOM05D006730 ORTHO05D008189 5.3e-189 665.2 705 54.8
VMungo0720G0522 Vigna mungo HOM05D006730 ORTHO05D008189 2.3e-184 649.8 701 54.9
VMungo0647G1321 Vigna mungo HOM05D006730 ORTHO05D008189 1.4e-181 640.6 694 54.3
Lj3g0015132 Lotus japonicus HOM05D006730 ORTHO05D008189 9.7e-175 617.8 684 53.7
Lalb_Chr03g0025971 Lupinus albus HOM05D006730 ORTHO05D008189 3.5e-172 609.4 690 54.3
Lalb_Chr03g0026031 Lupinus albus HOM05D006730 ORTHO05D008189 3.5e-172 609.4 690 54.3
arahy.Tifrunner.gnm1.ann1.S6BLSS Arachis hypogaea HOM05D006730 ORTHO05D008189 1.1e-157 561.2 688 50.1
arahy.Tifrunner.gnm1.ann1.PF62HI Arachis hypogaea HOM05D006730 ORTHO05D008189 1.0e-147 528.1 687 48.8
Cfa015217 Carpinus fangiana HOM05D006730 ORTHO05D008189 5.6e-130 469.2 717 42.4
Prupe.8G045700 Prunus persica HOM05D006730 ORTHO05D008189 2.5e-122 443.7 685 41.5
QL10p052118 Quercus lobata HOM05D006730 ORTHO05D008189 1.9e-117 427.6 722 41.8
Haze_01419 Corylus avellana HOM05D006730 ORTHO05D008189 3.9e-107 393.3 637 41.9
MD04G1046800 Malus domestica HOM05D006730 ORTHO05D008189 3.9e-107 393.3 683 41.1
TAR633G0487 Trochodendron aralioides HOM05D006730 ORTHO05D008189 1.5e-106 391.3 693 38.1
Manes.04G048400 Manihot esculenta HOM05D006730 ORTHO05D008189 3.3e-106 390.2 712 40.7
Ciclev10019155m.g Citrus clementina HOM05D006730 ORTHO05D008189 4.3e-106 389.8 693 38.4
TAR633G1963 Trochodendron aralioides HOM05D006730 ORTHO05D008189 6.9e-104 382.5 694 37.6
Duzib151G0982 Durio zibethinus HOM05D006730 ORTHO05D008189 9.9e-103 378.6 680 38.4
Sed0020880 Sechium edule HOM05D006730 ORTHO05D008189 1.3e-102 378.3 718 35.5
Potri.017G018300 Populus trichocarpa HOM05D006730 ORTHO05D008189 3.8e-102 376.7 689 37.0
Atru.chr4.1340 Acer truncatum HOM05D006730 ORTHO05D008189 1.3e-99 368.2 678 38.3
Actinidia27097 Actinidia chinensis HOM05D006730 ORTHO05D008189 2.3e-99 367.5 714 37.5
CsaV3_7G002050 Cucumis sativus L. HOM05D006730 ORTHO05D008189 3.0e-99 367.1 697 36.9
FvH4_1g27220 Fragaria vesca HOM05D006730 ORTHO05D008189 3.3e-98 363.6 687 38.1
CiPaw.01G173600 Carya illinoinensis HOM05D006730 ORTHO05D008189 9.6e-98 362.1 710 38.5
Cpa.g.sc9.329 Carica papaya HOM05D006730 ORTHO05D008189 1.3e-97 361.7 704 36.5
Thecc.04G171700 Theobroma cacao HOM05D006730 ORTHO05D008189 1.3e-97 361.7 689 38.2
FAN26G1825 Fragaria x ananassa HOM05D006730 ORTHO05D008189 1.5e-95 354.8 687 37.8
MELO3C015702.2 Cucumis melo HOM05D006730 ORTHO05D008189 1.0e-94 352.1 698 35.7
Eucgr.A00038 Eucalyptus grandis HOM05D006730 ORTHO05D008189 1.9e-93 347.8 703 37.3
FAN19G2476 Fragaria x ananassa HOM05D006730 ORTHO05D008189 9.3e-93 345.5 686 37.6
Nn1g09713 Nelumbo nucifera HOM05D006730 ORTHO05D008189 9.3e-93 345.5 691 35.7
TWI15G0430 Tripterygium wilfordii HOM05D006730 ORTHO05D008189 4.6e-92 343.2 675 38.2
Sabra17G0012500 Salix brachista HOM05D006730 ORTHO05D008189 1.8e-91 341.3 675 35.6
ClCG09G018880 Citrullus lanatus HOM05D006730 ORTHO05D008189 5.1e-91 339.7 656 38.3
Sc19g0000330 Simmondsia chinensis HOM05D006730 ORTHO05D008189 6.7e-91 339.3 707 34.5
Oeu002416.1 Olea europaea HOM05D006730 ORTHO05D008189 8.7e-91 339.0 720 33.5
COL.COLO4_28380 Corchorus olitorius HOM05D006730 ORTHO05D008189 1.1e-90 338.6 672 36.5
CANSAT56G2182 Cannabis sativa HOM05D006730 ORTHO05D008189 1.6e-89 334.7 695 34.8
Sabra06G0076300 Salix brachista HOM05D006730 ORTHO05D008189 3.7e-89 333.6 653 35.2
Aa31LG1G25250 Aethionema arabicum HOM05D006730 ORTHO05D008189 1.1e-88 332.0 692 34.7
Gohir.D02G011000 Gossypium hirsutum HOM05D006730 ORTHO05D008189 2.4e-88 330.9 679 35.1
Gorai.005G013400 Gossypium raimondii HOM05D006730 ORTHO05D008189 2.0e-87 327.8 679 34.9
AL7G49300 Arabidopsis lyrata HOM05D006730 ORTHO05D008189 4.5e-87 326.6 713 34.6
vmacro21172 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 5.9e-87 326.2 724 34.1
PGR102G2296 Punica granatum HOM05D006730 ORTHO05D008189 1.3e-86 325.1 699 34.3
RcHm_v2.0_Chr3g0487611 Rosa chinensis HOM05D006730 ORTHO05D008189 1.5e-82 311.6 711 35.3
AT5G40520 Arabidopsis thaliana HOM05D006730 ORTHO05D008189 8.2e-81 305.8 718 34.4
GSVIVG01038091001 Vitis vinifera HOM05D006730 ORTHO05D008189 2.4e-80 304.3 605 35.4
vmacro00655 Vaccinium macrocarpon HOM05D006730 ORTHO05D008189 5.3e-80 303.1 669 34.1
Carub.0007s3500 Capsella rubella HOM05D006730 ORTHO05D008189 2.6e-79 300.8 714 33.6
MSTRG.27276 Avicennia marina HOM05D006730 ORTHO05D008189 6.5e-78 296.2 687 33.3
BcaB02g08030 Brassica carinata HOM05D006730 ORTHO05D008189 5.1e-75 286.6 698 33.2
Gohir.A02G010500 Gossypium hirsutum HOM05D006730 ORTHO05D008189 5.1e-75 286.6 414 42.3
Sp7g05120 Schrenkiella parvula HOM05D006730 ORTHO05D008189 5.1e-75 286.6 718 32.3
Lj3A110T20 Lonicera japonica HOM05D006730 ORTHO05D008189 6.7e-75 286.2 621 34.9
BcaC08g44345 Brassica carinata HOM05D006730 ORTHO05D008189 3.3e-74 283.9 686 33.4
BraA05t20528Z Brassica rapa HOM05D006730 ORTHO05D008189 5.7e-74 283.1 693 32.3
BolC6t36977H Brassica oleracea HOM05D006730 ORTHO05D008189 2.2e-73 281.2 688 33.7
A05p16170 Brassica napus HOM05D006730 ORTHO05D008189 6.3e-73 279.6 694 32.4
AUR62005936 Chenopodium quinoa HOM05D006730 ORTHO05D008189 4.1e-72 276.9 687 32.5
THA.LOC104805724 Tarenaya hassleriana HOM05D006730 ORTHO05D008189 1.5e-71 275.0 700 34.3
CARHR138600 Cardamine hirsuta HOM05D006730 ORTHO05D008189 2.0e-71 274.6 599 33.6
AUR62028127 Chenopodium quinoa HOM05D006730 ORTHO05D008189 2.0e-71 274.6 673 32.2
C06p17830 Brassica napus HOM05D006730 ORTHO05D008189 2.6e-71 274.2 721 32.0
Sopen06g029510 Solanum pennellii HOM05D006730 ORTHO05D008189 2.9e-70 270.8 735 31.0
TAR633G2319 Trochodendron aralioides HOM05D006730 ORTHO05D008189 2.9e-70 270.8 506 37.0
Solyc06g073160.4 Solanum lycopersicum HOM05D006730 ORTHO05D008189 8.5e-70 269.2 729 30.7
Dinv05091 Davidia involucrata HOM05D006730 ORTHO05D008189 4.2e-69 266.9 595 34.1
Lsat_1_v5_gn_5_69460 Lactuca sativa HOM05D006730 ORTHO05D008189 6.1e-68 263.1 633 32.9
Hma1.2p1_0324F.1_g125720 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 1.4e-67 261.9 555 38.0
Thhalv10027675m.g Eutrema salsugineum HOM05D006730 ORTHO05D008189 8.8e-67 259.2 695 32.2
Hma1.2p1_3037F.1_g331960 Hydrangea macrophylla HOM05D006730 ORTHO05D008189 3.3e-66 257.3 555 37.7
MBI11_g10487_MAGBIO Magnolia biondii HOM05D006730 ORTHO05D008189 1.7e-65 255.0 633 33.8
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 3.7e-65 253.8 601 35.1
Nitab4.5_0001210g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 8.2e-65 252.7 741 30.0
PGSC0003DMG400026917 Solanum tuberosum HOM05D006730 ORTHO05D008189 2.0e-63 248.1 687 31.0
Nitab4.5_0001586g0210 Nicotiana tabacum HOM05D006730 ORTHO05D008189 2.6e-63 247.7 663 31.2
Oeu029987.1 Olea europaea HOM05D006730 ORTHO05D008189 4.5e-63 246.9 709 29.2
Hund25530 Selenicereus undatus HOM05D006730 ORTHO05D008189 7.7e-63 246.1 427 35.8
Peaxi162Scf00180g00519 Petunia axillaris HOM05D006730 ORTHO05D008189 1.7e-62 245.0 647 32.3
EL10Ac9g22987 Beta vulgaris HOM05D006730 ORTHO05D008189 8.5e-62 242.7 724 29.0
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 1.1e-61 242.3 652 29.4
Nitab4.5_0002782g0010 Nicotiana tabacum HOM05D006730 ORTHO05D008189 2.1e-60 238.0 693 31.5
SGA_v2.0_scaffold94G28623 Striga asiatica HOM05D006730 ORTHO05D008189 1.8e-59 235.0 689 28.2
Cc03_g12540 Coffea canephora HOM05D006730 ORTHO05D008189 4.4e-58 230.3 675 31.0
CSS0011413 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 1.3e-54 218.8 299 45.2
SHI01154 Sapria himalayana HOM05D006730 ORTHO05D008189 2.1e-52 211.5 374 36.9
HanXRQChr17g0565921 Helianthus annuus HOM05D006730 ORTHO05D008189 5.2e-51 206.8 428 37.4
ATR0743G243 Amborella trichopoda HOM05D006730 ORTHO05D008189 5.4e-48 196.8 696 26.6
CDE07G0581 Ceratophyllum demersum HOM05D006730 ORTHO05D008189 7.0e-48 196.4 696 28.0
SGA_v2.0_scaffold36G14479 Striga asiatica HOM05D000061 ORTHO05D008189 1.2e-44 185.7 658 27.8
FAN28G2072 Fragaria x ananassa HOM05D006730 ORTHO05D008189 4.4e-42 177.2 345 35.9
CSS0007333 Camellia sinensis var. sinensis HOM05D006730 ORTHO05D008189 4.9e-41 173.7 299 37.5
FAN23G1889 Fragaria x ananassa HOM05D006730 ORTHO05D008189 5.6e-37 160.2 538 31.4
DCAR_027052 Daucus carota HOM05D006730 ORTHO05D008189 1.6e-36 158.7 326 34.7
Zm00001eb184290 Zea mays HOM05D006730 ORTHO05D008189 4.6e-31 140.6 701 23.4
unitig_26.g9736 Utricularia gibba HOM05D006730 ORTHO05D006349 4.3e-29 134.0 452 27.7
FAN28G2984 Fragaria x ananassa HOM05D006730 ORTHO05D008189 3.1e-27 127.9 337 34.4
Os09g0103200 Oryza sativa ssp. japonica HOM05D006730 ORTHO05D008189 1.1e-24 119.4 420 26.7
Ah.10g027080 Amaranthus hybridus HOM05D006730 ORTHO05D008189 3.5e-23 114.4 353 29.7
PSO017G5839 Papaver somniferum HOM05D006730 ORTHO05D008189 3.5e-23 114.4 430 25.3
HPP92_022486 Vanilla planifolia HOM05D001064 ORTHO05D000885 1.9e-16 92.0 311 24.8
Ah.10g027090 Amaranthus hybridus HOM05D006730 ORTHO05D008189 1.1e-13 82.8 141 38.3
PSO063G4508 Papaver somniferum HOM05D006730 ORTHO05D008189 2.8e-12 78.2 335 23.9
Actinidia26680 Actinidia chinensis HOM05D006730 ORTHO05D008189 5.2e-11 73.9 140 35.7
HanXRQChr12g0385981 Helianthus annuus HOM05D006730 ORTHO05D008189 1.9e-08 65.5 89 43.8


User provided reference genes

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